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>A7YKL0_LOOPS
1-72, 86-111, 116-147, 152-187, 204-232, 249-319, 328-338, 346-356, 373-414, 425-434, 447-457, 469-482, 505-523, 542-556, 569-582, 590-628, 648-659, 666-674, 696-706, 742-751, 763-788, 802-815, 825-842, 854-869, 905-916, 947-982, 992-1008
FFRENLAFPQ GEAREFSPEQ TRTNSPRTHS PTSRELWDGG RSNLPSEAGT EGQGTISSLN FPQITLWQRP LVtvrlggql ieallDTGAD DTVLEEIDLP GRWKPKMIGG IggfiKVRQY DQIPIEICGK KAIGTVLVGP TPINIIGrnm lTQIGCTLNF PISPIETVPV KLKPGMDGPK VKQWPLTeek ikalveicae mekEGKISKI GPENPYNTPV FAIRKKDSTK WRklvdfrel nkrtqdfwEV QLGIPHPAGL KKKKSVTVLD VGDAYFSVPL DEDFRKYTAF TIPSINNETP GIRYQYNVLP QGWKGSPAIf qssmtkiLEP FRKQNPDIvi yqymdDLYVG SDLEIGqhrt kieelrqhll rwGLTTPDKK HQKEPPFLWM GYELHPDKWT VQPIVLPEKD SWTVndiqkl vgklNWASQI YPGIkvrqlc kllrgtKALT EVIPLTEeae lelaenreIL KEPVHGVYYD PSkdliaeiq kqgqgqwtyq iyqePFKNLK TGKYARMRGA HTNdvkqlte avqkittesi vIWGKTPKFK LPIQKEtwet wwteywqaTW IPEWEFVNTP PLvklwyqlE KEPIVGAETF YVDGAANRET KLGKAGYVTN RGRQKVVTlt dttnqktelq aiylalqDSG LEVNIVTDSq yalgiIQAQP DQSEselvnq iieqlikkek vylawVPAHK GIGGNEqvdk lvsagirkvl fldgidkaqd ehekyhsnwr aMASDFNLPP Vvakeivasc dkCQLKGEAM HGQVDCSPGI WQLDCTHLeg kvilvavhva sGYIEAEVIP AETGQetayf llklAGRWPV KTIHTDNGSN FTsatvkaac wwaGIKQEFG IPYNPQSQGv vesmnkelkk iigqvrdqae hlktavqmav fihnFKRKGG IGGYSAgeri vdiiatdiqt kelqkqitki qnfrvyYRDS RNPLWKGPAK LLWKGEGAVV IQDNSDIKVV PRrkakiird yGKQMAGDDC VASRQDED
>A7YKL0_HOTLOOPS
1-40, 85-108, 167-188, 203-232, 242-266, 291-301, 373-384, 424-432, 447-459, 538-554, 607-636, 833-842, 964-983, 989-1008
FFRENLAFPQ GEAREFSPEQ TRTNSPRTHS PTSRELWDGG rsnlpseagt egqgtissln fpqitlwqrp lvtvrlggql iealLDTGAD DTVLEEIDLP GRWKPKMIgg iggfikvrqy dqipieicgk kaigtvlvgp tpiniigrnm ltqigctlnf pispieTVPV KLKPGMDGPK VKQWPLTEek ikalveicae meKEGKISKI GPENPYNTPV FAIRKKDSTK WRklvdfrel nKRTQDFWEV QLGIPHPAGL KKKKSVtvld vgdayfsvpl dedfrkytaf TIPSINNETP Giryqynvlp qgwkgspaif qssmtkilep frkqnpdivi yqymddlyvg sdleigqhrt kieelrqhll rwGLTTPDKK HQKEppflwm gyelhpdkwt vqpivlpekd swtvndiqkl vgkLNWASQI YPgikvrqlc kllrgtKALT EVIPLTEEAe lelaenreil kepvhgvyyd pskdliaeiq kqgqgqwtyq iyqepfknlk tgkyarmrga htndvkqlte avqkittESI VIWGKTPKFK LPIQketwet wwteywqatw ipewefvntp plvklwyqle kepivgaetf yvdgaaNRET KLGKAGYVTN RGRQKVVTLT DTTNQKtelq aiylalqdsg levnivtdsq yalgiiqaqp dqseselvnq iieqlikkek vylawvpahk giggneqvdk lvsagirkvl fldgidkaqd ehekyhsnwr amasdfnlpp vvakeivasc dkcqlkgeam hgqvdcspgi wqldcthleg kvilvavhva sgyieaevip aetgqetayf llklagrwpv ktIHTDNGSN FTsatvkaac wwagikqefg ipynpqsqgv vesmnkelkk iigqvrdqae hlktavqmav fihnfkrkgg iggysageri vdiiatdiqt kelqkqitki qnfrvyyrds rnplwkgpak llwKGEGAVV IQDNSDIKVV PRRkakiiRD YGKQMAGDDC VASRQDED
>A7YKL0_REM465
10-37, 45-53, 931-939, 975-1008
ffrenlafpQ GEAREFSPEQ TRTNSPRTHS PTSRELWdgg rsnlPSEAGT EGQgtissln fpqitlwqrp lvtvrlggql iealldtgad dtvleeidlp grwkpkmigg iggfikvrqy dqipieicgk kaigtvlvgp tpiniigrnm ltqigctlnf pispietvpv klkpgmdgpk vkqwplteek ikalveicae mekegkiski gpenpyntpv fairkkdstk wrklvdfrel nkrtqdfwev qlgiphpagl kkkksvtvld vgdayfsvpl dedfrkytaf tipsinnetp giryqynvlp qgwkgspaif qssmtkilep frkqnpdivi yqymddlyvg sdleigqhrt kieelrqhll rwglttpdkk hqkeppflwm gyelhpdkwt vqpivlpekd swtvndiqkl vgklnwasqi ypgikvrqlc kllrgtkalt eviplteeae lelaenreil kepvhgvyyd pskdliaeiq kqgqgqwtyq iyqepfknlk tgkyarmrga htndvkqlte avqkittesi viwgktpkfk lpiqketwet wwteywqatw ipewefvntp plvklwyqle kepivgaetf yvdgaanret klgkagyvtn rgrqkvvtlt dttnqktelq aiylalqdsg levnivtdsq yalgiiqaqp dqseselvnq iieqlikkek vylawvpahk giggneqvdk lvsagirkvl fldgidkaqd ehekyhsnwr amasdfnlpp vvakeivasc dkcqlkgeam hgqvdcspgi wqldcthleg kvilvavhva sgyieaevip aetgqetayf llklagrwpv ktihtdngsn ftsatvkaac wwagikqefg ipynpqsqgv vesmnkelkk iigqvrdqae hlktavqmav fihnfkrkgg iggysageri vdiiatdiqt KELQKQITKi qnfrvyyrds rnplwkgpak llwkgegavv iqdnSDIKVV PRRKAKIIRD YGKQMAGDDC VASRQDED
| JOB-ID | A7YKL0_041913ZukDQH8AAQEAAG069u0AAAAU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | A7YKL0 |
| Description | tr|A7YKL0|A7YKL0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 OX=11676 GN=pol PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1008 |
| Download predictions | smoothed scores raw scores |