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>B1PPP0_LOOPS
1-123, 132-146, 161-173, 185-211, 220-260, 283-315, 381-409, 416-435, 444-624, 644-688, 778-785, 857-870, 945-962, 984-1022, 1045-1056, 1078-1176, 1188-1245, 1257-1327, 1348-1363, 1368-1396, 1420-1430, 1440-1532, 1542-1554, 1567-1584, 1595-1605, 1613-1628, 1687-1699, 1709-1718, 1776-1785, 1796-1804, 1869-1879, 1884-1891, 1903-1911, 1924-1939, 1965-1976, 1997-2079, 2097-2180, 2190-2224, 2238-2247, 2252-2271, 2284-2334, 2349-2416, 2421-2444, 2454-2476, 2507-2529, 2548-2588, 2601-2619, 2630-2656, 2680-2711, 2725-2735, 2763-2812, 2820-2832, 2865-2901, 2911-2919, 2953-2989, 3004-3011
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQPG YPWPLYGNEG CGWAGWLLSP RGSRPTWGPS DPRRRSRNLG KVIdtltcgf aDLMGYIPLV GAPLGGaara lahgvrvled GVNYATGNLP GCSfsiflla llscLTVPAS AYQVRNSTGL YHVTNDCPNS SivyeaadaI LHTPGCVPCV REGNTSSCWV AVTPTVATKD GKLPTTQLRR hvdllvgsat lcsalyvgdl cgSVFLLGQL FTFSPRRHWT TQDCNCSIYP GHITGhrmaw dmmmnwspta alvvaqllri pqaildmiag ahwgvlagia yfsmvgnwak vivvlllfag VDAETYVTGG SVGRALSGFN GLFTPGAKQn iqlinSNGSW HINRTALNCN ESLTTgwlag lfyTNKFNSS GCSERLASCR PLADFNQGWG PISYANGSGP DHRPYCWHYP PKPCGIVPAQ TVCGPVYCFT PSPVVVGTTD RLGSPTYRWG ENETDVFVLN NTRPPRGNWF GCTWMNSTGF TKACGAPPCV IGGVGNNTLH CPTDCFRKHP EATYSRCGSG PWLTPRCLVD YPYRLWHYPC TINYtlfkvr myvggvehrl daaCNWTRGE RCDLEDRDRS ELSPLLLSTT QWQVLPCSFT TLPALSTGli hlhqnivdvq ylygvgssiv swaikweyvv llfllladar icsclwmmll isqaeaalen lvilnaasla gthglasflv ffcfawyLKG RWVPGavyal ygmwplllll lalpqrayal dtevaascgg vvlvglmalt lspyyklyis wclwwlqyfl traeahLHVW VPPLNVRGGR davillmcvv hptlvfditk lllavfgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgalTGTYIY DHLTPLRDWA HNglrdlava vepvvfsrme tklITWGADT AACGDIINGL PVSARRGREI LLGPADGMAS KGwrllapit ayaqqtrgll gciiTSLTGR DKNQVEgevq ivstaaqtfl atcisgvCWT VYHGAGTRTI ASPKGPVLQM YTNVDKDLVG WPAPQGSRSL TPCTCGSSDL YLVTRHADVI PVRRRGDSRG SLLSPRPISY LKGSSGGPLL CPAGHAvgif raavctrGVA KAVDFIPVEN LEVTMRSPVF TDNSSPPAVP QSFQVAHLHA PTGSGKSTKV PAAYAaqgyk vlvlnpSVAA TLGFGAYMSK AHGVDPNIRT GVRTITTGSP ITYSTYGKFL ADGGCSGGAY DIIICDECHS TDATSILgig tvldqaetag arlvvlaTAT PPGSVTVPHP NIEevalSTT GEIPFYGKAI PLETIKGGRH LIFCHSkkkc delaaklval ginavayyrG LDVSVIPTSG dvvvvatdaL MTGYTGDFDS VIDCNTCVTQ TVDFSLDPTF TIETTTLPQD AVSRTQRRGR TGRGKPGIYR FVTPGERPSG MFDSSVLCEC YDAGCAWYEL TPaettvrlr aYMNTPGLPV CQDHlefweg vftgltHIDA HFLSQTKQSG ENLPylvayq atvcARAQAP PPSWDqmwkc liRLKPTLHG PTPLLYRLga vqnevtlthp vtkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrvVLSG KPAIIPDREv lyrefdemEE CSQHLPYIeq gmalaeqfkq kalgllqtas rqaeviapav qtnwqklevf wakhmwnfis giqylAGLST LPGNPaiasl maftaAVTSP LTTSqtllfn ilggwvaaql aapgaatafv gaglagaaig svglgkvlvd ilagygagva galvafkiMS GEVPSTEDLv nllPAILSPG Alvvgvvcaa ilRRHVGPGE Gavqwmnrli afaSRGNHVS PTHYVPESDa aarvtailss ltvtqllrrl hqwiSSECTT PCSDSWlrdi wdwicevlsd fktwlkAKLM PQLPGVPFVS CQRGYKGVWR GDGIMHTRCH CGAEITGHVK NGTMRIVGPR TCRNMWSGTF PINAYTTGPC TPLPAPNYTf alwrvsaeey veirqvGDFH YVTGMTTDNL KCPCQVPSPE FFTELDGVRL HRFAPPCKPL LREEVSFRVG LHEYPVGSQL PCEPEPDTAV LTSMLTDPSH itaeaakrrL ARGSPPSLAS SSASQLSAPS LKATCTANHD SPDAeliean llwrqemGGN ITRVESEnkv vILDSFDPLV AEEDEREISV Paeilrksrr faqALPVWAR PDYNPPLVET WKKPDYEPPV VHGCALPPPQ SPPVPPPRKK RTVVltestv stalaelaTK SFGSSSTSGI TGDDTTTPSE TAPSGHLPDS DTESYSSMPP LEGEPGDPDL SDGSWSTVSS GADAEDvvcc SMSYTWTGAL ITPCAAEEQK LPINalsnsl lrhHNLVYST TSRSACQRQK KVTFDRlqvl dshyqdvlke vkaaaskvka nllsveEACS LTPPHSAKSK FGYGAKDVRc harkavahin svwkdllEDS VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRvc ekmalydvvs KLPLAVMGSS YGFQYSPGQr veflvqawkS KKTPMGFSYD TRCFDSTVTE SDIRTEeaiy qccdldpqar vaikslterL YVGGPLTNSR GENCGYRRCR ASGVLTTSCG Ntltcyikar aacrAAGLQD CTMLVcgddl vvicesagvq edaaslraft eaMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDGAGKR VYYLTRDPTT PLaraawetA RHTPVNSWLG NIimfaptlw armilmthff svliardqle qaldCEIYGA CYSIEPLDLP PIIQRLHGLS AFSLHSYSPG Einrvaaclr KLGVPPLRAw rhrarsvrar llsrggraai cgkylfnwav rtKLKLTPIA AAGQLDLSGW FTAGYSGGDI YHSVSHARPr wfwfclllla agvGVYLLPN R
>B1PPP0_HOTLOOPS
1-77, 104-120, 245-257, 593-604, 1087-1097, 1135-1155, 1270-1282, 1349-1359, 1471-1509, 1686-1696, 1966-1974, 2034-2044, 2154-2163, 2241-2250, 2256-2276, 2282-2295, 2317-2328, 2346-2380, 2459-2469, 2507-2522, 2566-2583, 2633-2644, 2678-2697, 2820-2831, 2914-2923, 2930-2939, 3004-3011
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAqpg ypwplygneg cgwagwllsp rgsRPTWGPS DPRRRSRNLG kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnstgl yhvtndcpns sivyeaadai lhtpgcvpcv regntsscwv avtpTVATKD GKLPTTQlrr hvdllvgsat lcsalyvgdl cgsvfllgql ftfsprrhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvvaqllri pqaildmiag ahwgvlagia yfsmvgnwak vivvlllfag vdaetyvtgg svgralsgfn glftpgakqn iqlinsngsw hinrtalncn eslttgwlag lfytnkfnss gcserlascr pladfnqgwg pisyangsgp dhrpycwhyp pkpcgivpaq tvcgpvycft pspvvvgttd rlgsptyrwg enetdvfvln ntrpprgnwf gctwmnstgf tkacgappcv iggvgnntlh cptdcfrkhp eaTYSRCGSG PWLTprclvd ypyrlwhypc tinytlfkvr myvggvehrl daacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssiv swaikweyvv llfllladar icsclwmmll isqaeaalen lvilnaasla gthglasflv ffcfawylkg rwvpgavyal ygmwplllll lalpqrayal dtevaascgg vvlvglmalt lspyyklyis wclwwlqyfl traeahlhvw vpplnvrggr davillmcvv hptlvfditk lllavfgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltgtyiy dhltplrdwa hnglrdlava vepvvfsrme tklitwgadt aacgdiingl pvsarrgrei llgpadgmas kgwrllapit ayaqqtrgll gciitsltgr dknqvegevq ivstaaqtfl atcisgvcwt vyhgagTRTI ASPKGPVlqm ytnvdkdlvg wpapqgsrsl tpctcgssdl ylvtRHADVI PVRRRGDSRG SLLSPrpisy lkgssggpll cpaghavgif raavctrgva kavdfipven levtmrspvf tdnssppavp qsfqvahlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsK AHGVDPNIRT GVrtittgsp itystygkfl adggcsggay diiicdechs tdatsilgig tvldqaetag arlvvlatAT PPGSVTVPHp nieevalstt geipfygkai pletikggrh lifchskkkc delaaklval ginavayyrg ldvsviptsg dvvvvatdal mtgytgdfds vidcntcvtq tvdfsldptf TIETTTLPQD AVSRTQRRGR TGRGKPGIYR FVTPGERPSg mfdssvlcec ydagcawyel tpaettvrlr aymntpglpv cqdhlefweg vftglthida hflsqtkqsg enlpylvayq atvcaraqap ppswdqmwkc lirlkptlhg ptpllyrlga vqnevtlthp vtkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrVVLSG KPAIIPdrev lyrefdemee csqhlpyieq gmalaeqfkq kalgllqtas rqaeviapav qtnwqklevf wakhmwnfis giqylaglst lpgnpaiasl maftaavtsp lttsqtllfn ilggwvaaql aapgaatafv gaglagaaig svglgkvlvd ilagygagva galvafkims gevpstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtailss ltvtqllrrl hqwisSECTT PCSDswlrdi wdwicevlsd fktwlkaklm pqlpgvpfvs cqrgykgvwr gdgimhtrch cgaEITGHVK NGTMrivgpr tcrnmwsgtf pinayttgpc tplpapnytf alwrvsaeey veirqvgdfh yvtgmttdnl kcpcqvpspe ffteldgvrl hrfappckpl lreevsfrvg lheYPVGSQL PCEpepdtav ltsmltdpsh itaeaakrrl argsppslas ssasqlsaps lkatctanhd spdaeliean llwrqemggn ITRVESENKV vildsFDPLV AEEDEREISV PAEILRksrr fAQALPVWAR PDYNPplvet wkkpdyeppv vhgcalPPPQ SPPVPPPRkk rtvvltestv stalaELATK SFGSSSTSGI TGDDTTTPSE TAPSGHLPDS dtesyssmpp legepgdpdl sdgswstvss gadaedvvcc smsytwtgal itpcaaeeqk lpinalsnsl lrhhnlvyST TSRSACQRQk kvtfdrlqvl dshyqdvlke vkaaaskvka nllsveEACS LTPPHSAKSK FGygakdvrc harkavahin svwkdlleds vtpidttima knevfCVQPE KGGRKPARLI VFPdlgvrvc ekmalydvvs klplavmgss ygfqyspgqr veflvqawks kkTPMGFSYD TRCFdstvte sdirteeaiy qccdldpqar vaiksltERL YVGGPLTNSR GENCGYRrcr asgvlttscg ntltcyikar aacraaglqd ctmlvcgddl vvicesagvq edaaslraft eamtrysapp gdppqpeydl elitscssnv svahdgagkr vyyltrdptt plaraawetA RHTPVNSWLG Niimfaptlw armilmthff svliardqle qaldceiyga cysiepldlp piiqrlhgls afslhsyspg einrvaaclr klgVPPLRAW RHRarsvraR LLSRGGRAAi cgkylfnwav rtklkltpia aagqldlsgw ftagysggdi yhsvsharpr wfwfclllla agvGVYLLPN R
>B1PPP0_REM465
1-17, 47-74, 103-113, 2187-2214, 2321-2334, 2351-2412
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKARR PEGRtwaqpg ypwplygneg cgwagwllsp rgSRPTWGPS DPRrrsrnlg kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnstgl yhvtndcpns sivyeaadai lhtpgcvpcv regntsscwv avtptvatkd gklpttqlrr hvdllvgsat lcsalyvgdl cgsvfllgql ftfsprrhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvvaqllri pqaildmiag ahwgvlagia yfsmvgnwak vivvlllfag vdaetyvtgg svgralsgfn glftpgakqn iqlinsngsw hinrtalncn eslttgwlag lfytnkfnss gcserlascr pladfnqgwg pisyangsgp dhrpycwhyp pkpcgivpaq tvcgpvycft pspvvvgttd rlgsptyrwg enetdvfvln ntrpprgnwf gctwmnstgf tkacgappcv iggvgnntlh cptdcfrkhp eatysrcgsg pwltprclvd ypyrlwhypc tinytlfkvr myvggvehrl daacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssiv swaikweyvv llfllladar icsclwmmll isqaeaalen lvilnaasla gthglasflv ffcfawylkg rwvpgavyal ygmwplllll lalpqrayal dtevaascgg vvlvglmalt lspyyklyis wclwwlqyfl traeahlhvw vpplnvrggr davillmcvv hptlvfditk lllavfgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltgtyiy dhltplrdwa hnglrdlava vepvvfsrme tklitwgadt aacgdiingl pvsarrgrei llgpadgmas kgwrllapit ayaqqtrgll gciitsltgr dknqvegevq ivstaaqtfl atcisgvcwt vyhgagtrti aspkgpvlqm ytnvdkdlvg wpapqgsrsl tpctcgssdl ylvtrhadvi pvrrrgdsrg sllsprpisy lkgssggpll cpaghavgif raavctrgva kavdfipven levtmrspvf tdnssppavp qsfqvahlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsk ahgvdpnirt gvrtittgsp itystygkfl adggcsggay diiicdechs tdatsilgig tvldqaetag arlvvlatat ppgsvtvphp nieevalstt geipfygkai pletikggrh lifchskkkc delaaklval ginavayyrg ldvsviptsg dvvvvatdal mtgytgdfds vidcntcvtq tvdfsldptf tietttlpqd avsrtqrrgr tgrgkpgiyr fvtpgerpsg mfdssvlcec ydagcawyel tpaettvrlr aymntpglpv cqdhlefweg vftglthida hflsqtkqsg enlpylvayq atvcaraqap ppswdqmwkc lirlkptlhg ptpllyrlga vqnevtlthp vtkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrvvlsg kpaiipdrev lyrefdemee csqhlpyieq gmalaeqfkq kalgllqtas rqaeviapav qtnwqklevf wakhmwnfis giqylaglst lpgnpaiasl maftaavtsp lttsqtllfn ilggwvaaql aapgaatafv gaglagaaig svglgkvlvd ilagygagva galvafkims gevpstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtailss ltvtqllrrl hqwissectt pcsdswlrdi wdwicevlsd fktwlkaklm pqlpgvpfvs cqrgykgvwr gdgimhtrch cgaeitghvk ngtmrivgpr tcrnmwsgtf pinayttgpc tplpapnytf alwrvsaeey veirqvgdfh yvtgmttdnl kcpcqvpspe ffteldgvrl hrfappckpl lreevsfrvg lheypvgsql pcepepdtav ltsmltdpsh itaeaaKRRL ARGSPPSLAS SSASQLSAPS LKATctanhd spdaeliean llwrqemggn itrvesenkv vildsfdplv aeedereisv paeilrksrr faqalpvwar pdynpplvet wkkpdyeppv vhgcalpppq SPPVPPPRKK RTVVltestv stalaelatk SFGSSSTSGI TGDDTTTPSE TAPSGHLPDS DTESYSSMPP LEGEPGDPDL SDGSWSTVSS GAdaedvvcc smsytwtgal itpcaaeeqk lpinalsnsl lrhhnlvyst tsrsacqrqk kvtfdrlqvl dshyqdvlke vkaaaskvka nllsveeacs ltpphsaksk fgygakdvrc harkavahin svwkdlleds vtpidttima knevfcvqpe kggrkparli vfpdlgvrvc ekmalydvvs klplavmgss ygfqyspgqr veflvqawks kktpmgfsyd trcfdstvte sdirteeaiy qccdldpqar vaikslterl yvggpltnsr gencgyrrcr asgvlttscg ntltcyikar aacraaglqd ctmlvcgddl vvicesagvq edaaslraft eamtrysapp gdppqpeydl elitscssnv svahdgagkr vyyltrdptt plaraaweta rhtpvnswlg niimfaptlw armilmthff svliardqle qaldceiyga cysiepldlp piiqrlhgls afslhsyspg einrvaaclr klgvpplraw rhrarsvrar llsrggraai cgkylfnwav rtklkltpia aagqldlsgw ftagysggdi yhsvsharpr wfwfclllla agvgvyllpn r
| JOB-ID | B1PPP0_151111Zt8QD38AAQEAABRfIYoAAABK |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | B1PPP0 |
| Description | tr|B1PPP0|B1PPP0_9HEPC Genome polyprotein OS=hepatitis C virus genotype 1a OX=2847144 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3011 |
| Download predictions | smoothed scores raw scores |