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>C3V005_LOOPS
1-42, 55-64, 96-103, 121-143, 156-235, 281-301, 313-324, 332-340, 351-395, 408-418, 425-463, 486-494, 504-519, 525-544, 551-569, 579-607, 615-666, 701-712, 727-739, 781-819, 829-840, 873-942, 949-958, 999-1084, 1090-1121, 1129-1139, 1193-1200, 1269-1276, 1310-1319, 1344-1355, 1369-1382, 1411-1437, 1455-1463, 1478-1495, 1509-1518, 1531-1550, 1556-1638, 1647-1659, 1668-1682, 1716-1731, 1749-1775, 1793-1847, 1868-1882, 1891-1964, 1974-1997, 2033-2047, 2064-2098, 2216-2229, 2268-2280, 2323-2348, 2384-2408, 2440-2459, 2484-2500, 2518-2530, 2560-2579, 2589-2612, 2617-2630, 2638-2652, 2661-2678, 2692-2710, 2734-2766, 2783-2812, 2821-2864, 2878-2888, 2907-2922, 2933-2950, 2980-3005, 3014-3042, 3071-3103, 3118-3131, 3149-3242, 3274-3295, 3311-3349, 3368-3392
MNQRKKVVRP PFNMLKRERN RVSTPQGLVK RFSTGLFSGK GPlrmvlafi tflrVLSIPP TAGIlkrwgq lkknkaikil igfrkeigrm lnilnGRKRS AVDwtgwllv vvllgvtlaa TVRKERDGTT VIRAEGKDAA TQVrvengtc vilatDMGSW CDDSLTYECV TIDQGEEPVD VDCFCRNVDG VYLEYGRCGK QEGSRTRRSV LIPSHAQGDL TGRGHKWLEG DSLRThltrv egwvwknkvl tlaviavvwl tvesvvtrva vvvvllclap VYASRCTHLE NRDFVTGTQG Ttrvtlvlel ggCVTITAEG KPSMdvwlds iYQENPAKTR eyclhaklsd TKVAARCPTM GPATLAEEHQ SGTVCKRDQS DRGWGNHCGL FGKGSivtcv kasceakKKA TGHVYDANki vytvKVEPHT GDYVAANETH SGRKTASFTV SSERTILTMG DYGdvsllcr vasgvdlaqt vilelDKTSE HLPTawqvhr dwfNDLALPW KHEGAQNWNn aerlVEFGAP HAVKMDVYNL GDQTgvllks LAGVPVAHID GTKYHLKSGh vtcevgleKL KMKGLTYTMC DKTKFTWKRI PTDSGHDtvv mevaFSGTKP CRIPVRAVAH GSPDVNVAML ITPNPTIENN GGGFIEMQLP PGDNIIyvge lshqwfqkgs sigrvfqktr kgierltvig EHAWDFGSTG GFltsvgkal htvlggAFNS LFGGVGFLPk ilvgvvlawl glnsrntsma mtciavggit lflgftvqad MGCVASWSGK ELKCGSGIFV VDNVHTWTEQ YKFQPESPAr lasailnaHK DGVCGIRSTT rlenvmwkqi tnelnyvlwe gghdltvvag dvKGVLTKGK RALTPPVSDL KYSWKTWGKA KIFTPEARNS TFLIDGPDTS ECPNERRAWN SLEVEDYGFG MFttniwmKF REGSSEVCdh rlmsaaikdq kavhadmgyw iessknqtwq iekaslieVK TCLWPKTHTL WSNGVLESQM LIPKSYAGPF SQHNYRQGYA TQTVGPWHLG KLEIDFGECP GTTVTIQEDC DHRGPSLRTT TASGklvtqW CCRSCTMPPL RFLGEDGCWY GMEIRPLSEK EenmvksqVT AGQGTSETFs mgllcltlfv eeclrrrvtr khmilvvvit lcaiilgglt wmdllralim lgDTMSGRIG gqihlaimav fkmspgyvlg vflrkltsre talmvigmam ttvlsiphdl melidgislg lillkivtQF DNTQVGtlal sltfirstmp lvmawrtima vlfvvtlipL CRTSCLQKQs hwveitalil gaqalpvylm tlmKGASRRS WPLNEgimav glvsllgsAL LKNDVPLAGP MVagglllaa yvmsgssadl slekaanvqw DEMADITGSS PIIEVKQDED GSFSIRDvee tnmitllvkl alitVSGLYP LAIpvtmtlw ymwqvktQRS GALWDVPSPA ATKKAalseg vyrimqrgLF GKTQVGVGih megvfhtmwh VTRGSVICHE TGRLEPSWAD vrndmISYGG GWRLGDKWDK EEDVQVLAIE PGKNPKHVQT KPGLFKTLTG EIGAVTLDFK PGTSGSPIIN RKGKVIGLYG NGVVTKSGdy vsaitqAERI GEPDYEVDEd ifrkkrlTIM DLHPGAGKTK RIlpsivrea lkrrlrtlil aptrvvaaem eealrGLPIR YQTPAVKSEH Tgreivdlmc hatfttrlLS STRVPNYNLI VMDEAHFTDP SSVAArgyis trvemgeaaa ifMTATPPGA TDPFPQSNSP IEDIEREIPE RSWNTGFDWI TDYQGKTVWF VPSIKAGndi anclrksgkk viqlsrkTFD TEYPKTKLTD WDfvvttdis EMGANFRAGR VIDPRRCLKP VILPDGPERV ILAGPIPVTP ASAAQRRGRI GRNPAQEDDQ YVFSGDPLKN DEDHahwtea kmlLDNIYTP EGIIPTLFGP EREKTQAidg efrlrgeqrk tfvelmrrgd lpvwlsykva saGISYKDRE WCFTGERnnq ileenmevei wtrEGEKKKL RPRWLDARVY ADPMALKDFK EFASGRKSit ldilteiasl ptylssrakl aldnivmlht terggrayqh alnelpesle tlmlvallga mtagiflffm qgkgigklsm glitiavasg llwvaeiqpq wiaasiilef flmvlLIPEP EKQRTPQDNq liyviltilt iigliaanem gliektktdf gfyqvktETT ILDVDLRPAS awtlyavatt iltpmlrhti entsanlsla aianqaavlm glGKGWPLHR MDLGVPLLAM GCYSQVNPtt ltaslvmllv hyaiigpglq akatreaqkr taaGIMKNPT VDGITVIDLE PISYDPKFek qlgqvmllvl cagqlllmrt twafcevltL ATGPILTLWE GNPGRFWNTt iavstanifr gsylagagla fslIKNAQTP RRGTGTTGET lgekwkrqln sldrkefEEY KRSGILEVDR teaksalkdg skikhavsrg sskirwiveR GMVKPKGKVV DLGCGRGGWs yymatlknVT EVKGYTKGGP GHEEPIPMAT YGwnlvKLHS GVDVFYKPTE qvdtllcDIG ESSSNPTIEE GRtlrvlkmv EPWLSSKPEF CIKVLNPYmp tvieeleklq rKHGGNLVRC PLSRNSTHEM ywvsgasgni vssvnttskm llnRFTTRHR KPTYEKDVDL GAGTRSVSTE TEKPDMtiig rrlqrlqeeh keTWHYDQEN PYRTWAYHGS YEAPSTGSAS SMvngvvkll TKPWDVIPMV TQLAMTDTTP FGQQRVFKEK VDTRTPQPKP GTRMvmttta nwlwallGKK KNPRLCTRee fiskvrsnaa igavfqEEQG WTSASEAVND SRfwelvdke raLHQEGKCE SCVYNMMGKR ekklgefgra kgsraiwymw lgarflefeA LGFLNEDHWF GRENSWSGVE GEGLHrlgyi leeIDKKDGD LMYADDTAGW DTRITEDDLQ NEeliteqma phhkilakai fkltyqnkvv KVLRPTPRGA VMDIISRKDQ RGSGQVGTYG LNTftnmevq lirqmeaEGV ITQDDMQNPK Glkervekwl kecgvdrlKR MAISGDDCVV KPLDERFGTS LLFLNDMGKV RKDIPQWEPS KGWKNWQEVP FCSHHFHKIF MKDGRSLVVP CRNQDELIGR ARISQGAGWS LRetaclgka yaqmwslmyf hrrdlrlasm aicSAVPTEW FPTSRTTWSI HAHHQwmtte dmlkvwnrvw IEDNPNMTDK TPVHSWEDIP YLGKREDLWC GSLIGLSSRa twaknihtai tqvrnliGKE EYVDYMPVMK RYSAPSESEG VL
>C3V005_HOTLOOPS
1-42, 64-74, 118-146, 174-183, 195-226, 282-302, 317-325, 362-372, 408-419, 434-456, 560-570, 592-606, 876-894, 900-924, 1067-1087, 1131-1138, 1481-1490, 1559-1568, 1578-1593, 1606-1624, 1646-1658, 1667-1684, 1713-1727, 1763-1772, 1865-1882, 1893-1907, 1914-1951, 1984-1992, 1997-2008, 2016-2024, 2033-2041, 2047-2074, 2270-2278, 2381-2393, 2483-2572, 2637-2654, 2733-2769, 2783-2791, 2835-2865, 2876-2885, 2906-2918, 2933-2946, 3071-3098, 3119-3131, 3146-3162, 3228-3240, 3314-3324, 3381-3392
MNQRKKVVRP PFNMLKRERN RVSTPQGLVK RFSTGLFSGK GPlrmvlafi tflrvlsipp tagILKRWGQ LKKNkaikil igfrkeigrm lnilngrkrs avdwtgwllv vvllgvtLAA TVRKERDGTT VIRAEGKDAA TQVRVEngtc vilatdmgsw cddsltyecv tidQGEEPVD VDCfcrnvdg vyleYGRCGK QEGSRTRRSV LIPSHAQGDL TGRGHKwleg dslrthltrv egwvwknkvl tlaviavvwl tvesvvtrva vvvvllclap vYASRCTHLE NRDFVTGTQG TTrvtlvlel ggcvtiTAEG KPSMDvwlds iyqenpaktr eyclhaklsd tkvaarcptm gPATLAEEHQ SGtvckrdqs drgwgnhcgl fgkgsivtcv kasceakKKA TGHVYDANKi vytvkvepht gdyVAANETH SGRKTASFTV SSERTIltmg dygdvsllcr vasgvdlaqt vileldktse hlptawqvhr dwfndlalpw khegaqnwnn aerlvefgap havkmdvynl gdqtgvllks lagvpvahiD GTKYHLKSGH vtcevglekl kmkgltytmc dKTKFTWKRI PTDSGHdtvv mevafsgtkp cripvravah gspdvnvaml itpnptienn gggfiemqlp pgdniiyvge lshqwfqkgs sigrvfqktr kgierltvig ehawdfgstg gfltsvgkal htvlggafns lfggvgflpk ilvgvvlawl glnsrntsma mtciavggit lflgftvqad mgcvaswsgk elkcgsgifv vdnvhtwteq ykfqpespar lasailnahk dgvcgirstt rlenvmwkqi tnelnyvlwe gghdltvvag dvkgvLTKGK RALTPPVSDL KYSWktwgkA KIFTPEARNS TFLIDGPDTS ECPNerrawn slevedygfg mfttniwmkf regssevcdh rlmsaaikdq kavhadmgyw iessknqtwq iekaslievk tclwpkthtl wsngvlesqm lipksyagpf sqhnyrqgya tqtvgpwhlg kleidfgecp gttvtiQEDC DHRGPSLRTT TASGKLVtqw ccrsctmppl rflgedgcwy gmeirplsek eenmvksqvt AGQGTSETfs mgllcltlfv eeclrrrvtr khmilvvvit lcaiilgglt wmdllralim lgdtmsgrig gqihlaimav fkmspgyvlg vflrkltsre talmvigmam ttvlsiphdl melidgislg lillkivtqf dntqvgtlal sltfirstmp lvmawrtima vlfvvtlipl crtsclqkqs hwveitalil gaqalpvylm tlmkgasrrs wplnegimav glvsllgsal lkndvplagp mvagglllaa yvmsgssadl slekaanvqw demaditgss piievkqded gsfsirdvee tnmitllvkl alitvsglyp laipvtmtlw ymwqvktqrs GALWDVPSPA atkkaalseg vyrimqrglf gktqvgvgih megvfhtmwh vtrgsviche tgrlepswad vrndmisyGG GWRLGDKWdk eedvqvlAIE PGKNPKHVQT KPGlfktltg eigavTLDFK PGTSGSPIIN RKGKviglyg ngvvtksgdy vsaitQAERI GEPDYEVDed ifrkkrLTIM DLHPGAGKTK RILPsivrea lkrrlrtlil aptrvvaaem eeALRGLPIR YQTPAVKseh tgreivdlmc hatfttrlls strvpnynli vmDEAHFTDP SSvaargyis trvemgeaaa ifmtatppga tdpfpqsnsp iediereipe rswntgfdwi tdyqgktvwf vpsikagndi anclrksgkk viqlSRKTFD TEYPKTKLTD WDfvvttdis emGANFRAGR VIDPRRClkp vilPDGPERV ILAGPIPVTP ASAAQRRGRI GRNPAQEDDQ Yvfsgdplkn dedhahwtea kmlldniytp egiIPTLFGP ERektqAIDG EFRLRGEQrk tfvelMRRGD LPVWlsykva saGISYKDRE WcftgeRNNQ ILEENMEVEI WTREGEKKKL RPRWldarvy adpmalkdfk efasgrksit ldilteiasl ptylssrakl aldnivmlht terggrayqh alnelpesle tlmlvallga mtagiflffm qgkgigklsm glitiavasg llwvaeiqpq wiaasiilef flmvllipep ekqrtpqdnq liyviltilt iigliaanem gliektktdf gfyqvktetT ILDVDLRPas awtlyavatt iltpmlrhti entsanlsla aianqaavlm glgkgwplhr mdlgvpllam gcysqvnptt ltaslvmllv hyaiigpglq akatreaqkr TAAGIMKNPT VDGitvidle pisydpkfek qlgqvmllvl cagqlllmrt twafcevltl atgpiltlwe gnpgrfwntt iavstanifr gsylagagla fsLIKNAQTP RRGTGTTGET LGEKWKRQLN SLDRKEFEEY KRSGILEVDR TEAKSALKDG SKIKHAVSRG SSKIRWIVER GMVKPKGKVV DLgcgrggws yymatlknvt evkgytkggp gheepipmat ygwnlvklhs gvdvfykpte qvdtllCDIG ESSSNPTIEE GRTLrvlkmv epwlsskpef cikvlnpymp tvieeleklq rkhggnlvrc plsrnsthem ywvsgasgni vssvnttskm llNRFTTRHR KPTYEKDVDL GAGTRSVSTE TEKPDMTIIg rrlqrlqeeh keTWHYDQEN Pyrtwayhgs yeapstgsas smvngvvkll tkpwdvipmv tqlaMTDTTP FGQQRVFKEK VDTRTPQPKP GTRMVmttta nwlwaLLGKK KNPRLctree fiskvrsnaa igavfQEEQG WTSASEAVnd srfwelvdke raLHQEGKCE SCVYNMmgkr ekklgefgra kgsraiwymw lgarflefea lgflnedhwf grenswsgve geglhrlgyi leeidkkdgd lmyaddtagw dtriteddlq neeliteqma phhkilakai fkltyqnkvv KVLRPTPRGA VMDIISRKDQ RGSGQVGTyg lntftnmevq lirqmeaeGV ITQDDMQNPK Glkervekwl kecgvDRLKR MAISGDDCVV KPlderfgts llflndmgkv rkdipqweps kgwknwqevp fcshhfhkif mkdgrslvvp crnqdelIGR ARISQGAGWS lretaclgka yaqmwslmyf hrrdlrlasm aicsavptew fptsrttwsi hahhqwmtte dmlkvwnrvw iedNPNMTDK TPVHswedip ylgkredlwc gsliglssra twaknihtai tqvrnligke eyvdympvmk RYSAPSESEG VL
>C3V005_REM465
366-380, 1122-1132, 1931-1938, 2371-2380, 2490-2497, 2534-2550, 2803-2810, 3383-3392
mnqrkkvvrp pfnmlkrern rvstpqglvk rfstglfsgk gplrmvlafi tflrvlsipp tagilkrwgq lkknkaikil igfrkeigrm lnilngrkrs avdwtgwllv vvllgvtlaa tvrkerdgtt viraegkdaa tqvrvengtc vilatdmgsw cddsltyecv tidqgeepvd vdcfcrnvdg vyleygrcgk qegsrtrrsv lipshaqgdl tgrghkwleg dslrthltrv egwvwknkvl tlaviavvwl tvesvvtrva vvvvllclap vyasrcthle nrdfvtgtqg ttrvtlvlel ggcvtitaeg kpsmdvwlds iyqenpaktr eyclhaklsd tkvaarcptm gpatlAEEHQ SGTVCKRDQS drgwgnhcgl fgkgsivtcv kasceakkka tghvydanki vytvkvepht gdyvaaneth sgrktasftv ssertiltmg dygdvsllcr vasgvdlaqt vileldktse hlptawqvhr dwfndlalpw khegaqnwnn aerlvefgap havkmdvynl gdqtgvllks lagvpvahid gtkyhlksgh vtcevglekl kmkgltytmc dktkftwkri ptdsghdtvv mevafsgtkp cripvravah gspdvnvaml itpnptienn gggfiemqlp pgdniiyvge lshqwfqkgs sigrvfqktr kgierltvig ehawdfgstg gfltsvgkal htvlggafns lfggvgflpk ilvgvvlawl glnsrntsma mtciavggit lflgftvqad mgcvaswsgk elkcgsgifv vdnvhtwteq ykfqpespar lasailnahk dgvcgirstt rlenvmwkqi tnelnyvlwe gghdltvvag dvkgvltkgk raltppvsdl kyswktwgka kiftpearns tflidgpdts ecpnerrawn slevedygfg mfttniwmkf regssevcdh rlmsaaikdq kavhadmgyw iessknqtwq iekaslievk tclwpkthtl wsngvlesqm lipksyagpf sqhnyrqgya tqtvgpwhlg kleidfgecp gttvtiqedc dhrgpslrtt tasgklvtqw ccrsctmppl rflgedgcwy gmeirplsek eENMVKSQVT AGqgtsetfs mgllcltlfv eeclrrrvtr khmilvvvit lcaiilgglt wmdllralim lgdtmsgrig gqihlaimav fkmspgyvlg vflrkltsre talmvigmam ttvlsiphdl melidgislg lillkivtqf dntqvgtlal sltfirstmp lvmawrtima vlfvvtlipl crtsclqkqs hwveitalil gaqalpvylm tlmkgasrrs wplnegimav glvsllgsal lkndvplagp mvagglllaa yvmsgssadl slekaanvqw demaditgss piievkqded gsfsirdvee tnmitllvkl alitvsglyp laipvtmtlw ymwqvktqrs galwdvpspa atkkaalseg vyrimqrglf gktqvgvgih megvfhtmwh vtrgsviche tgrlepswad vrndmisygg gwrlgdkwdk eedvqvlaie pgknpkhvqt kpglfktltg eigavtldfk pgtsgspiin rkgkviglyg ngvvtksgdy vsaitqaeri gepdyevded ifrkkrltim dlhpgagktk rilpsivrea lkrrlrtlil aptrvvaaem eealrglpir yqtpavkseh tgreivdlmc hatfttrlls strvpnynli vmdeahftdp ssvaargyis trvemgeaaa ifmtatppga tdpfpqsnsp iediereipe rswntgfdwi tdyqgktvwf vpsikagndi anclrksgkk viqlsrktfd teypktkltd wdfvvttdis emganfragr vidprrclkp vilpdgperv ilagpipvtp ASAAQRRGri grnpaqeddq yvfsgdplkn dedhahwtea kmlldniytp egiiptlfgp erektqaidg efrlrgeqrk tfvelmrrgd lpvwlsykva sagisykdre wcftgernnq ileenmevei wtregekkkl rprwldarvy adpmalkdfk efasgrksit ldilteiasl ptylssrakl aldnivmlht terggrayqh alnelpesle tlmlvallga mtagiflffm qgkgigklsm glitiavasg llwvaeiqpq wiaasiilef flmvllipep ekqrtpqdnq liyviltilt iigliaanem gliektktdf gfyqvktett ildvdlrpas awtlyavatt iltpmlrhti entsanlsla aianqaavlm glgkgwplhr mdlgvpllam gcysqvnptt ltaslvmllv hyaiigpglq AKATREAQKR taagimknpt vdgitvidle pisydpkfek qlgqvmllvl cagqlllmrt twafcevltl atgpiltlwe gnpgrfwntt iavstanifr gsylagagla fsliknaqtP RRGTGTTget lgekwkrqln sldrkefeey krsgilevdr teaKSALKDG SKIKHAVSRG sskirwiver gmvkpkgkvv dlgcgrggws yymatlknvt evkgytkggp gheepipmat ygwnlvklhs gvdvfykpte qvdtllcdig esssnptiee grtlrvlkmv epwlsskpef cikvlnpymp tvieeleklq rkhggnlvrc plsrnsthem ywvsgasgni vssvnttskm llnrfttrhr kptyekdvdl gagtrsvste tekpdmtiig rrlqrlqeeh ketwhydqen pyrtwayhgs yeAPSTGSAS smvngvvkll tkpwdvipmv tqlamtdttp fgqqrvfkek vdtrtpqpkp gtrmvmttta nwlwallgkk knprlctree fiskvrsnaa igavfqeeqg wtsaseavnd srfwelvdke ralhqegkce scvynmmgkr ekklgefgra kgsraiwymw lgarflefea lgflnedhwf grenswsgve geglhrlgyi leeidkkdgd lmyaddtagw dtriteddlq neeliteqma phhkilakai fkltyqnkvv kvlrptprga vmdiisrkdq rgsgqvgtyg lntftnmevq lirqmeaegv itqddmqnpk glkervekwl kecgvdrlkr maisgddcvv kplderfgts llflndmgkv rkdipqweps kgwknwqevp fcshhfhkif mkdgrslvvp crnqdeligr arisqgagws lretaclgka yaqmwslmyf hrrdlrlasm aicsavptew fptsrttwsi hahhqwmtte dmlkvwnrvw iednpnmtdk tpvhswedip ylgkredlwc gsliglssra twaknihtai tqvrnligke eyvdympvmk rySAPSESEG VL
| JOB-ID | C3V005_071229Zukr3X8AAQEAADCSJhIAAAAG |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | C3V005 |
| Description | tr|C3V005|C3V005_9FLAV Genome polyprotein OS=Chimeric Tick-borne encephalitis virus/Dengue virus 4 OX=638787 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3392 |
| Download predictions | smoothed scores raw scores |