Download PostScript file
>D0UFA6_LOOPS
1-11, 21-32, 39-59, 64-83, 88-249, 291-325, 340-363, 376-391, 429-436, 484-559, 564-625, 638-730, 739-804, 810-855, 941-954, 961-995, 1009-1022, 1028-1064, 1078-1090, 1099-1111, 1122-1149, 1157-1187, 1232-1240, 1254-1268, 1281-1303, 1326-1342, 1356-1375, 1385-1392, 1399-1411, 1432-1461, 1474-1483, 1497-1517, 1532-1546, 1579-1618, 1642-1657, 1664-1692, 1703-1732
MGQTVTTPLS Ltlqhwgdvq RIASNQSVDV KKrrwvtfCS AEWPTFNVGW PQDGTFNLGv isqVKSRVFC PGPHGHPDQV PYIvtweALA YDPPPWVKPF VSPKPPPLPT APVLPPGPSA QPPSRSALYP ALTPSIKSKP PKPQVLPDSG GPLIDLLTED PPPYGAQPSS SARENNEEEA ATTSEVSPPS PMVSRLRGRR DPPAADSTTS QAFPLRMGGD GQLQYWPFSS SDLYNWKNNN PSFSEDPGKl taliesvlit hqptwddcqq llgtlltgee kqrvlleark AVRGNDGRPT QLPNEVNAAF PLERPDWDYT TTEGRnhlvl yrqlllaglQ NAGRSPTNLA KVKGITQGPN ESPsaflerl keayrRYTPY DPEDPGQETN Vsmsfiwqsa pdigrklerl edlksktlgd lvreaekiFN KRETPEeree rirreieeke errraedeqr ererdrrrhr emskllatvv igqRQDRQGG ERRRPQLDKD QCAYCKEKGH WAKDCPKKPR GPRGPRPQTS LLTLGDGGQG QEPPPEPRIT LKVGGQPVTf lvdTGAQHSV LTQNPGPLSD KSAWVQGATG GKRYRWTTDR KVHLATGKVT HSFLHVPDCP YPLLGrdllt klkaqihFEG SGAQVVGPMG QPLQVLTLNI EDEYRLHETS KEPDVPLGST WLSDFPQAWA ETGGMGLAVR QAPLIIPLKA TSTPVSIKQY PMSQEARLGI kphiqrllDQ GILVPCQSPW NTPLLPVKKP GTNDYRPVQD LREVNKRVED IHPTVPNPYN LLSGLPPSHQ WYTVldlkdA FFCLRLHPTS QPLFAFEWRD PEMGISGQLT WTRLPQGFKN SPTLFdealh rdladfriqh pdlillqyvd dlllaatseq dcqrgtrall qtlgnlgyra sakkaqicqk qvkylgyllk egqrwltear KETVMGQPTP KTPRqlrefl GTAGFCRLWI PGFAEMAAPL YPLTKTGTLF NWGPDqqkay qeikqallTA PALGLPDLTK PFelfvdEKQ GYAKGVLTQK LGPWRRPVAY LSKKLDPVAA GWPPclrmva aiavltkDAG KLTMGQPLVI laphaveaLV KQPPDRWLSN Armthyqaml lDTDRVQFGP VVALNPATLL PLPEKEAPHd cleilaETHG TRPDLTDQPI PDADYTWYTD GSSFLQEgqr ragaavttet eviwaralpa gtsaqraeli altqalkmae gKKLNVYTDS ryafatahvh geiYRRRGLL TSEGREIKnk neilallkal FLPKRLSIIH CPGHQKGNSA EARgnrmadq aareaamkav letstLLIED STPYTPPHFH YTetdlkrlr elgatYNQTK GYWVLQGKPV MPDQSvfell dslhRLTHLS PQkmkallDR EESPYYMLNR Drtiqyvtet ctacvqvnas kAKIGAGVRV RGHRPGTHWE VDFTEVKPRL Ygykyllvfv dtfSGWVEAF PTKretakvv skklleDIFP RFGMPQVLGS DNGPAFAsqv sqsvadllgi dWKLHCAYRP QSSGQVermn rtiketltkl tlasgtrdwv lllplalyRA RNTPGPHGLT PYEILYGAPP PLVNFHDPEM SKLTNSPSlq ahlqalqavq qevwkplaaa yQDQLDQPVI PHPFRVGdav wvrRHQTKNL EPRWKGPYTV LLTTPTALKV DGisawihaa hvKAATTPPA GTAWKVQRSQ NPLKIRLTRG AP
>D0UFA6_HOTLOOPS
1-33, 43-53, 178-218, 290-316, 352-364, 409-501, 506-528, 572-599, 605-620, 641-649, 670-679, 749-767, 939-956, 1034-1045, 1158-1169, 1207-1214, 1246-1268, 1293-1302, 1327-1337, 1430-1456, 1538-1548, 1558-1567, 1666-1679, 1706-1732
MGQTVTTPLS LTLQHWGDVQ RIASNQSVDV KKRrwvtfcs aeWPTFNVGW PQDgtfnlgv isqvksrvfc pgphghpdqv pyivtweala ydpppwvkpf vspkppplpt apvlppgpsa qppsrsalyp altpsikskp pkpqvlpdsg gplidllted pppygaqpss sarenneEEA ATTSEVSPPS PMVSRLRGRR DPPAADSTTS QAFPLRMGgd gqlqywpfss sdlynwknnn psfsedpgkl taliesvlit hqptwddcqq llgtlltgee kqrvllearK AVRGNDGRPT QLPNEVNAAF PLERPDwdyt ttegrnhlvl yrqlllaglq nagrsptnla kVKGITQGPN ESPSaflerl keayrrytpy dpedpgqetn vsmsfiwqsa pdigrkleRL EDLKSKTLGD LVREAEKIFN KRETPEEREE RIRREIEEKE ERRRAEDEQR ERERDRRRHR EMSKLLATVV IGQRQDRQGG ERRRPQLDKD QcaycKEKGH WAKDCPKKPR GPRGPRPQts lltlgdggqg qepppeprit lkvggqpvtf lvdtgaqhsv lTQNPGPLSD KSAWVQGATG GKRYRWTTDr kvhlATGKVT HSFLHVPDCP ypllgrdllt klkaqihfeg SGAQVVGPMg qplqvltlni edeyrlhetS KEPDVPLGSt wlsdfpqawa etggmglavr qapliiplka tstpvsikqy pmsqearlgi kphiqrlldq gilvpcqsPW NTPLLPVKKP GTNDYRPvqd lrevnkrved ihptvpnpyn llsglppshq wytvldlkda ffclrlhpts qplfafewrd pemgisgqlt wtrlpqgfkn sptlfdealh rdladfriqh pdlillqyvd dlllaatseq dcqrgtrall qtlgnlgyra sakkaqicqk qvkylgyllk egqrwlteAR KETVMGQPTP KTPRQLrefl gtagfcrlwi pgfaemaapl ypltktgtlf nwgpdqqkay qeikqallta palglpdltk pfelfvdekq gyaKGVLTQK LGPWRrpvay lskkldpvaa gwppclrmva aiavltkdag kltmgqplvi laphavealv kqppdrwlsn armthyqaml ldtdrvqfgp vvalnpatll plpekeaphd cleilaeTHG TRPDLTDQPi pdadytwytd gssflqegqr ragaavttet eviwarALPA GTSAqraeli altqalkmae gkklnvytds ryafaTAHVH GEIYRRRGLL TSEGREIKnk neilallkal flpkrlsiih cpGHQKGNSA EArgnrmadq aareaamkav letstlLIED STPYTPPhfh ytetdlkrlr elgatynqtk gywvlqgkpv mpdqsvfell dslhrlthls pqkmkalldr eespyymlnr drtiqyvtet ctacvqvnaS KAKIGAGVRV RGHRPGTHWE VDFTEVkprl ygykyllvfv dtfsgwveaf ptkretakvv skklledifp rfgmpqvlgs dngpafasqv sqsvadllgi dwklhcaYRP QSSGQVERmn rtiketlTKL TLASGTRdwv lllplalyra rntpgphglt pyeilygapp plvnfhdpem skltnspslq ahlqalqavq qevwkplaaa yqdqldqpvi phpfrvgdav wvrrhQTKNL EPRWKGPYTv llttptalkv dgisawihaa hvkaaTTPPA GTAWKVQRSQ NPLKIRLTRG AP
>D0UFA6_REM465
118-125, 164-210, 432-441, 449-469, 483-497, 518-525, 535-544, 1186-1197, 1296-1317
mgqtvttpls ltlqhwgdvq riasnqsvdv kkrrwvtfcs aewptfnvgw pqdgtfnlgv isqvksrvfc pgphghpdqv pyivtweala ydpppwvkpf vspkppplpt apvlppgPSA QPPSRsalyp altpsikskp pkpqvlpdsg gplidllted pppYGAQPSS SARENNEEEA ATTSEVSPPS PMVSRLRGRR DPPAADSTTS qafplrmggd gqlqywpfss sdlynwknnn psfsedpgkl taliesvlit hqptwddcqq llgtlltgee kqrvlleark avrgndgrpt qlpnevnaaf plerpdwdyt ttegrnhlvl yrqlllaglq nagrsptnla kvkgitqgpn espsaflerl keayrrytpy dpedpgqetn vsmsfiwqsa pdigrklerl edlksktlgd lvreaekifn kRETPEEREE RirreieeKE ERRRAEDEQR ERERDRRRHr emskllatvv igQRQDRQGG ERRRPQLdkd qcayckekgh wakdcpkKPR GPRGPrpqts lltlGDGGQG QEPPpeprit lkvggqpvtf lvdtgaqhsv ltqnpgplsd ksawvqgatg gkryrwttdr kvhlatgkvt hsflhvpdcp ypllgrdllt klkaqihfeg sgaqvvgpmg qplqvltlni edeyrlhets kepdvplgst wlsdfpqawa etggmglavr qapliiplka tstpvsikqy pmsqearlgi kphiqrlldq gilvpcqspw ntpllpvkkp gtndyrpvqd lrevnkrved ihptvpnpyn llsglppshq wytvldlkda ffclrlhpts qplfafewrd pemgisgqlt wtrlpqgfkn sptlfdealh rdladfriqh pdlillqyvd dlllaatseq dcqrgtrall qtlgnlgyra sakkaqicqk qvkylgyllk egqrwltear ketvmgqptp ktprqlrefl gtagfcrlwi pgfaemaapl ypltktgtlf nwgpdqqkay qeikqallta palglpdltk pfelfvdekq gyakgvltqk lgpwrrpvay lskkldpvaa gwppclrmva aiavltkdag kltmgqplvi laphavealv kqppdrwlsn armthyqaml ldtdrvqfgp vvalnpatll plpekeaphd cleilaethg trpdltdqpi pdadytwytd gssflQEGQR RAGAAVTtet eviwaralpa gtsaqraeli altqalkmae gkklnvytds ryafatahvh geiyrrrgll tsegreiknk neilallkal flpkrlsiih cpghqKGNSA EARGNRMADQ AAREAAMkav letstllied stpytpphfh ytetdlkrlr elgatynqtk gywvlqgkpv mpdqsvfell dslhrlthls pqkmkalldr eespyymlnr drtiqyvtet ctacvqvnas kakigagvrv rghrpgthwe vdftevkprl ygykyllvfv dtfsgwveaf ptkretakvv skklledifp rfgmpqvlgs dngpafasqv sqsvadllgi dwklhcayrp qssgqvermn rtiketltkl tlasgtrdwv lllplalyra rntpgphglt pyeilygapp plvnfhdpem skltnspslq ahlqalqavq qevwkplaaa yqdqldqpvi phpfrvgdav wvrrhqtknl eprwkgpytv llttptalkv dgisawihaa hvkaattppa gtawkvqrsq nplkirltrg ap
| JOB-ID | D0UFA6_082712Zwoy4H8AAQEAAGAGTsMAAAAD |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | D0UFA6 |
| Description | tr|D0UFA6|D0UFA6_9GAMR Gag-Pol polyprotein OS=Xenotropic MuLV-related virus OX=438045 GN=gag-pro-pol PE=4 SV=1 |
| Title/ID | none |
| Sequence length | 1732 |
| Download predictions | smoothed scores raw scores |