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>E3V2B6_LOOPS
1-18, 31-44, 53-66, 85-110, 130-257, 271-308, 320-345, 368-404, 421-430, 437-459, 478-523, 534-564, 618-631, 639-722, 727-741, 748-775, 786-799, 807-815, 829-871, 887-914, 947-994, 1012-1049, 1059-1069, 1083-1132, 1141-1167, 1176-1195, 1209-1255, 1264-1280, 1321-1364, 1370-1407, 1414-1422, 1433-1460
FKLLAASGLT RCGRGGLVvt etavkivkfh NRTFTLGPVN LKVAsevelk daVEHNQHPV ARPVDGgvvl lrsavpslid vlisGADASP KLLARHGPGN TGIDGTLWDF eaeatkeeva lsaqiiqacD IRRGDAPEIG LPYKLYPVRG NPERVKGVLQ NTRFGDIPYK TPSDTGSPVH AAACLTPNAT PVTDGRSVLA TTMPSGFELY VPTIPASVLD YLDSRPDCPK QLTEHGCEDA ALRDLSKYDL STQGFVLpgv lrlvrkylfa HVGKCPPVHR PSTYPAKNSM AGINGNRFPT KDIQSVPEid vlcaqavreN WQTVTPCTLK KQYCGKKKTR TILGTnnfia lahraalsgv tqgfmkkAFN SPIALGKNKF KELQAPVLGR CLEADLASCD RSTPaivrwf aanllyelac AEEHLPSYVL ncchdlLVTQ SGAVTKRGGL SSGDPITSVs ntiyslviya qhmvlsyFKS GHPHGLLFLQ DQLKFEDMLK VQPLIVYSDD LVLYAESPSM PNYhwwvehl nlmLGFQTDP KKTTITDSPS FLGCRIINGR QLVPnrdril aalayhmkas nvskyyasaa ailmdscacl eydpewfeel vvgiaqcARK DGYSFPGPPF FlsmweklRS NHEGKKSRMC GYCGAPAPYA TACGLDVCVY HTHFHQHCPV IIWCGHPAGS GSCSECEPPL GKGTSPLDEV LEQVPYKPPR TVimhvEQGL TPLDPGRYQT RrglvsvRRG IRGNEVDLPD GDYASTALLP TCKEInmvav asnvlRSRFI IGPPGAGKTh wllqqvQDGD VIYTPthqtm ldmiralgTC RFNVPAGTTL QFPAPSRTGP WVRILAGGWC PGKNSFLDEA Aycnhldvlr llskttLTCL GDFKQLHPVG FDSHCYVFDI MPQTqlktiw rfgqnicdai qpdyrdklms mvnttrVTHV EKPVRYGQVL TPYHRDREDG AITIDSSQGA TFDVVTLHLP TKDSlnrqra lvaitrarha iFVYDPHRQL QSMFDLPAKG TPVNLAVHRD EQLIVLDRNn reitvaqaLG NGDKFRATDk rvvdslraic adLEGSSSPL PKVAHNLGFY FSPDLTQFAK LPAELAPHWP VVTTQNNERW PDrlvaslrp IHKYSRACIG AGYMVGPSVF LGTPGVVsyy ltkfvRGEAQ VLPETVFSTG RIEVDcreyl ddrervvaES LPHAFIGDVK GTTVGGCHHV TSKYLPRFLP KESVAVVGVS SPGKAakavc tltDVYLPDL EAYLHPETQS rcwkvmldfk evrlmvwkdk tayfqlegrh ftwyqlasya SYIRVPVNST VYLDPCMGPA LCNRRVVGST HWGADLAVTP YDYGakiilS SAYHGEMPPG YKILACAEFS LDDPVRYKHT WGFESDTayl yefTGNGEDW EDyndafrar qkGKIYKANA TSMRFHFPPG PVIEPTLGLN
>E3V2B6_HOTLOOPS
1-18, 29-40, 53-66, 143-153, 273-286, 318-336, 444-458, 727-739, 746-763, 838-848, 945-962, 988-996, 1056-1068, 1084-1092, 1121-1131, 1178-1193, 1210-1225, 1233-1240, 1272-1282, 1439-1460
FKLLAASGLT RCGRGGLVvt etavkivkFH NRTFTLGPVN lkvasevelk daVEHNQHPV ARPVDGgvvl lrsavpslid vlisgadasp kllarhgpgn tgidgtlwdf eaeatkeeva lsaqiiqacd irrgdapeig lpYKLYPVRG NPErvkgvlq ntrfgdipyk tpsdtgspvh aaacltpnat pvtdgrsvla ttmpsgfely vptipasvld yldsrpdcpk qltehgceda alrdlskydl stqgfvlpgv lrlvrkylfa hvGKCPPVHR PSTYPAknsm agingnrfpt kdiqsvpeid vlcaqavREN WQTVTPCTLK KQYCGKkktr tilgtnnfia lahraalsgv tqgfmkkafn spialgknkf kelqapvlgr cleadlascd rstpaivrwf aanllyelac aeehlpsyvl ncchdllvtq sgaVTKRGGL SSGDPITSvs ntiyslviya qhmvlsyfks ghphgllflq dqlkfedmlk vqplivysdd lvlyaespsm pnyhwwvehl nlmlgfqtdp kkttitdsps flgcriingr qlvpnrdril aalayhmkas nvskyyasaa ailmdscacl eydpewfeel vvgiaqcark dgysfpgppf flsmweklrs nhegkksrmc gycgapapya tacgldvcvy hthfhqhcpv iiwcghpags gscseceppl gkgtspldev leqvpykppr tvimhvEQGL TPLDPGRYQt rrglvSVRRG IRGNEVDLPD GDYastallp tckeinmvav asnvlrsrfi igppgagkth wllqqvqdgd viytpthqtm ldmiralgtc rfnvpagTTL QFPAPSRTgp wvrilaggwc pgknsfldea aycnhldvlr llskttltcl gdfkqlhpvg fdshcyvfdi mpqtqlktiw rfgqnicdai qpdyrdklms mvntTRVTHV EKPVRYGQVL TPyhrdredg aitidssqga tfdvvtlHLP TKDSLNrqra lvaitrarha ifvydphrql qsmfdlpakg tpvnlavhrd eqlivldrnn reitvAQALG NGDKFRATdk rvvdslraic adlEGSSSPL PKvahnlgfy fspdltqfak lpaelaphwp VVTTQNNERW Pdrlvaslrp ihkysracig agymvgpsvf lgtpgvvsyy ltkfvrgEAQ VLPETVFSTG RIEvdcreyl ddrervvaeS LPHAFIGDVK GTTVGgchhv tsKYLPRFLP kesvavvgvs spgkaakavc tltdvylpdl eAYLHPETQS RCwkvmldfk evrlmvwkdk tayfqlegrh ftwyqlasya syirvpvnst vyldpcmgpa lcnrrvvgst hwgadlavtp ydygakiils sayhgemppg ykilacaefs lddpvrykht wgfesdtayl yeftgngedw edyndafrar qkgkiykaNA TSMRFHFPPG PVIEPTLGLN
>E3V2B6_REM465
690-699
fkllaasglt rcgrgglvvt etavkivkfh nrtftlgpvn lkvasevelk davehnqhpv arpvdggvvl lrsavpslid vlisgadasp kllarhgpgn tgidgtlwdf eaeatkeeva lsaqiiqacd irrgdapeig lpyklypvrg npervkgvlq ntrfgdipyk tpsdtgspvh aaacltpnat pvtdgrsvla ttmpsgfely vptipasvld yldsrpdcpk qltehgceda alrdlskydl stqgfvlpgv lrlvrkylfa hvgkcppvhr pstypaknsm agingnrfpt kdiqsvpeid vlcaqavren wqtvtpctlk kqycgkkktr tilgtnnfia lahraalsgv tqgfmkkafn spialgknkf kelqapvlgr cleadlascd rstpaivrwf aanllyelac aeehlpsyvl ncchdllvtq sgavtkrggl ssgdpitsvs ntiyslviya qhmvlsyfks ghphgllflq dqlkfedmlk vqplivysdd lvlyaespsm pnyhwwvehl nlmlgfqtdp kkttitdsps flgcriingr qlvpnrdril aalayhmkas nvskyyasaa ailmdscacl eydpewfeel vvgiaqcark dgysfpgppf flsmweklrs nhegkksrmc gycgapapya tacgldvcvy hthfhqhcpv iiwcghpagS GSCSECEPPl gkgtspldev leqvpykppr tvimhveqgl tpldpgryqt rrglvsvrrg irgnevdlpd gdyastallp tckeinmvav asnvlrsrfi igppgagkth wllqqvqdgd viytpthqtm ldmiralgtc rfnvpagttl qfpapsrtgp wvrilaggwc pgknsfldea aycnhldvlr llskttltcl gdfkqlhpvg fdshcyvfdi mpqtqlktiw rfgqnicdai qpdyrdklms mvnttrvthv ekpvrygqvl tpyhrdredg aitidssqga tfdvvtlhlp tkdslnrqra lvaitrarha ifvydphrql qsmfdlpakg tpvnlavhrd eqlivldrnn reitvaqalg ngdkfratdk rvvdslraic adlegssspl pkvahnlgfy fspdltqfak lpaelaphwp vvttqnnerw pdrlvaslrp ihkysracig agymvgpsvf lgtpgvvsyy ltkfvrgeaq vlpetvfstg rievdcreyl ddrervvaes lphafigdvk gttvggchhv tskylprflp kesvavvgvs spgkaakavc tltdvylpdl eaylhpetqs rcwkvmldfk evrlmvwkdk tayfqlegrh ftwyqlasya syirvpvnst vyldpcmgpa lcnrrvvgst hwgadlavtp ydygakiils sayhgemppg ykilacaefs lddpvrykht wgfesdtayl yeftgngedw edyndafrar qkgkiykana tsmrfhfppg pvieptlgln
| JOB-ID | E3V2B6_171147Z0NeU38AAQEAAB2a4zsAAABN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | E3V2B6 |
| Description | tr|E3V2B6|E3V2B6_PRRSV Replicase polyprotein 1ab (Fragment) OS=Porcine reproductive and respiratory syndrome virus OX=28344 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1460 |
| Download predictions | smoothed scores raw scores |