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>F5BWY6_LOOPS
1-122, 132-146, 161-173, 185-211, 220-258, 287-315, 381-396, 402-409, 417-434, 445-456, 463-624, 645-688, 777-788, 858-870, 945-962, 984-1021, 1048-1058, 1084-1129, 1136-1177, 1187-1240, 1268-1288, 1296-1327, 1347-1395, 1420-1430, 1440-1453, 1461-1514, 1522-1534, 1542-1552, 1595-1604, 1614-1642, 1683-1698, 1746-1755, 1776-1786, 1796-1804, 1814-1827, 1869-1891, 1903-1911, 1924-1940, 1962-1979, 1993-2079, 2093-2168, 2173-2182, 2190-2333, 2346-2485, 2526-2544, 2564-2606, 2620-2635, 2649-2670, 2698-2727, 2744-2752, 2762-2770, 2782-2799, 2805-2830, 2838-2853, 2880-2897, 2906-2916, 2929-2936, 2971-3008, 3022-3029
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQPG YPWPLYGNEG CGWAGWLLSP RGSRPSWGPT DPRRRSRNLG KVidtltcgf aDLMGYIPLV GAPLGGaara lahgvrvled GVNYATGNLP GCSfsiflla llscLTVPAS AYQVRNSSGL YHVTNDCPNS SivyeaadaI LHTPGCVPCV REGNASRCWV AVTPTVATRD GKLPTTQLrr hidllvgsat lcsalyvgdl cgsvflVGQL FTFSPRRHWT TQDCNCSIYP GHITGhrmaw dmmmnwspta alvvaqllri pqaimdmiag ahwgvlagia yfsmvgnwak vlvvlllfag VDAETHVTGG NAGRTTaglv gLLTPGAKQn iqlintNGSW HINSTALNCN ESLNtgwlag lfyqHKFNSS GCPERLascr rlTDFAQGWG PISYANGSGL DERPYCWHYP PRPCGIVPAK SVCGPVYCFT PSPVVVGTTD RSGAPTYSWG ANDTDVFVLN NTRPPLGNWF GCTWMNSTGF TKVCGAPPCV IGGVGNNTLL CPTDCFRKHP EATYSRCGSG PWITPRCMVD YPYRLWHYPC TINYtifkvr myvggvehrl eaacNWTRGE RCDLEDRDRS ELSPLLLSTT QWQVLPCSFT TLPALSTGli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvilnaasla gthglvsflv ffcfawYLKG RWVPGAAYal ygmwplllll lalpqrayal dtevaascgg vvlvglmalt lspyykryis wcmwwlqyfl trveaqlHVW VPPLNVRGGR davillmcvv hptlvfditk lllaifgplw ilqasllkvp yfvrvqgllr icalarkiag ghyvqmaiik lgalTGTYVY NHLTPLRDWA HNglrdlava vepvvfsrme tklITWGADT AACGDIINGL PVSARRGQEI LLGPADGMVS Kgwrllapit ayaqqtrgll gaivvsmTGR DRTEQAGEvq ilstvsqsfl gttisgvlwt vyhGAGNKTL AGLRGPVTQM YSSAEGDLVG WPSPPGTKSL EPCKCGAVDl ylvtrNADVI PARRRGDKRG ALLSPRPIST LKGSSGGPVL CPRGHVVglf raavcsRGVA KSIDFIPVET LDVVTRSPTF SDNSTPPAVP QTYQVGYLHA PTGSGKSTKV pvayaalgyk vlvlnpsvaa tlgfgayLSK AHGINPNIRT GVRTVMTGea itystYGKFL ADGGCASGAY DIIICDECHA VDATSILgig tvldqaetag vrltvlATAT PPGSVTTPHP DIEEVGLGRE GEIPFYGRAI PLSCIKGGRH LIFCHskkkc delaaalrgm glnavayyrG LDVSIIPAQG dvvvvatdaL MTGYTGDFDS VIDcnvavtq AVDFSLDPTF TITTQTVPQD AVSRSQRRGR TGRGRQGTYR YVSTGERASG MFDSvvlcec yDAGAAWYDL TPAEttvrlr aYFNTPGLPV CQdhlefwea vftglthida hflsqtkqag enfaylvayq atvcARAKAP PPSWdamwkc larLKPTLAG PTPLLYRLGP ITNEVTLTHP GTkyiatcmq adlevmtstw vlaggvlaav aayclatgcv siIGRLHVNQ RVVVAPDKev lyeafdemee casraaliee gqriaemlks kiqgllqqas kqaqdIQPAM QASWPkveqf warhmwnfis giqylAGLST LPGNPAvasm mafsaALTSP LSTSttilln imgGWLASQI APPAGATgfv vsglvgaavg siglgkvlvd ilagygagis galvafkiMS GEKPSMEDVI NLLPGILSPG Alvvgvicaa ilRRHVGPGE Gavqwmnrli afaSRGNHVA PTHYVTESDA sqrvtqllgs ltitsllrrl hNWITEDCPI PCSGSWLRDv wdwvctiltd fkNWLTSKLF PKLPGLPFIS CQKGYKGVWA GTGIMTTRCP CGANISGNVR LGSMRITGPK TCMNTWQGTF PINCYTEGQC APKPPTNYKt aiwrvaasey aeVTQHGSYS YVTGLTTDNL KIPCQLPSPE FFSWVDGVQI HRFAPTPKPF FRDEVSFCVG LNSYAVGSQL PCEPEPDAdv lrSMLTDPPH ITaetaarrL ARGSPPSEAS SSVSQLSAPS LRATCTTHSN TYDVDMVDAN LLMEGGVAQT EPESRVPVLD FLEPMAEEES DLEPSIPSEC MLPRSGFPRA LPAWARPDYN PPLVESWRRP DYQPPTVAGC ALPPPKKAPT PPPRRRRTVG LSEstiseal qqlaiKTFGQ PPSSGDAGSS TGAGAAESGG PTSPGEPAPS ETGSASSMPP LEGEPGDPDL ESDQVELQPP PQGGGVAPGS GSGSWSTCSE EDDTTVCCSM SYSWTGALIT PCSPEEEKLP INPLSNSLLR YHNKVYCTTS KSASQrakkv tfdrtqvlda hydsvlkdik laaskvsarl ltleeACQLT PPHSARSKYG FGAKevrsls gravnhiksv wkdLLEDPQT PIPTTIMAKN EVFCVDPAKG GKKPARLIVY PDLGVRvcek malyditqkL PQAVMGASYG FQYSPaqrve yllkawaeKK DPMGFSYDTR CFDSTVTERD irteesiyqa cslpeearta ihslterLYV GGPMFNSKGQ TCGYRRCRAS GVLTTSMgnt itcyvkalaa ckaAGIVAPT MLvcgddlvv iSESQGTEED ernlraftea mTRYSAPPGD PPRPEYDLEl itscSSNVSV ALGPRGRRRY YLTRDPTTPL araawetVRH SPINSWLGNI IQYaptiwvr mvlmthffsi lmvqdtldqN LNFEMYGSVY SVNPLDLpai ierlhGLDAF SMHTYShhel trvasalrKL GAPPLRvwks raravrasli srggkaavcg rylfnwavkt KLKLTPLPEA RLLDLSSWFT VGAGGGDIFH SVSRARPRsl lfgllllfvg vGLFLLPAR
>F5BWY6_HOTLOOPS
1-77, 103-120, 244-257, 294-305, 592-604, 1135-1169, 1189-1201, 1207-1219, 1269-1283, 1348-1362, 1470-1511, 1935-1943, 2197-2211, 2235-2245, 2259-2270, 2305-2326, 2478-2497, 2525-2540, 2586-2602, 2649-2662, 2762-2772, 2782-2791, 2806-2830, 2839-2849, 2949-2959
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAqpg ypwplygneg cgwagwllsp rgSRPSWGPT DPRRRSRNLG kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnssgl yhvtndcpns sivyeaadai lhtpgcvpcv regnasrcwv avtPTVATRD GKLPTTQlrr hidllvgsat lcsalyvgdl cgsvflvgql ftfSPRRHWT TQDCNcsiyp ghitghrmaw dmmmnwspta alvvaqllri pqaimdmiag ahwgvlagia yfsmvgnwak vlvvlllfag vdaethvtgg nagrttaglv glltpgakqn iqlintngsw hinstalncn eslntgwlag lfyqhkfnss gcperlascr rltdfaqgwg pisyangsgl derpycwhyp prpcgivpak svcgpvycft pspvvvgttd rsgaptyswg andtdvfvln ntrpplgnwf gctwmnstgf tkvcgappcv iggvgnntll cptdcfrkhp eATYSRCGSG PWITprcmvd ypyrlwhypc tinytifkvr myvggvehrl eaacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvilnaasla gthglvsflv ffcfawylkg rwvpgaayal ygmwplllll lalpqrayal dtevaascgg vvlvglmalt lspyykryis wcmwwlqyfl trveaqlhvw vpplnvrggr davillmcvv hptlvfditk lllaifgplw ilqasllkvp yfvrvqgllr icalarkiag ghyvqmaiik lgaltgtyvy nhltplrdwa hnglrdlava vepvvfsrme tklitwgadt aacgdiingl pvsarrgqei llgpadgmvs kgwrllapit ayaqqtrgll gaivvsmtgr drteqagevq ilstvsqsfl gttisgvlwt vyhgagnktl aglrgpvtqm yssaegdlvg wpsppgtksl epckcgavdl ylvtRNADVI PARRRGDKRG ALLSPRPIST LKGSSGGPVl cprghvvglf raavcsrgVA KSIDFIPVET LdvvtrSPTF SDNSTPPAVp qtyqvgylha ptgsgkstkv pvayaalgyk vlvlnpsvaa tlgfgaylSK AHGINPNIRT GVRtvmtgea itystygkfl adggcasgay diiicdecha vdatsilgig tvldqaetag vrltvlaTAT PPGSVTTPHP DIeevglgre geipfygrai plscikggrh lifchskkkc delaaalrgm glnavayyrg ldvsiipaqg dvvvvatdal mtgytgdfds vidcnvavtq avdfsldptF TITTQTVPQD AVSRSQRRGR TGRGRQGTYR YVSTGERASG Mfdsvvlcec ydagaawydl tpaettvrlr ayfntpglpv cqdhlefwea vftglthida hflsqtkqag enfaylvayq atvcarakap ppswdamwkc larlkptlag ptpllyrlgp itnevtlthp gtkyiatcmq adlevmtstw vlaggvlaav aayclatgcv siigrlhvnq rvvvapdkev lyeafdemee casraaliee gqriaemlks kiqgllqqas kqaqdiqpam qaswpkveqf warhmwnfis giqylaglst lpgnpavasm mafsaaltsp lststtilln imggwlasqi appagatgfv vsglvgaavg siglgkvlvd ilagygagis galvafkims gekpsmedvi nllpgilspg alvvgvicaa ilrrhvgpge gavqwmnrli afasrgnhva pthyVTESDA SQRvtqllgs ltitsllrrl hnwitedcpi pcsgswlrdv wdwvctiltd fknwltsklf pklpglpfis cqkgykgvwa gtgimttrcp cganisgnvr lgsmritgpk tcmntwqgtf pincytegqc apkpptnykt aiwrvaasey aevtqhgsys yvtglttdnl kipcqlpspe ffswvdgvqi hrfaptpkpf frdevsfcvg lnsyavgsql pcepepdadv lrsmltdpph itaetaarrl argsppSEAS SSVSQLSAPS Lratctthsn tydvdmvdan llmeGGVAQT EPESRvpvld flepmaeeES DLEPSIPSEC mlprsgfpra lpawarpdyn pplveswrrp dyqpPTVAGC ALPPPKKAPT PPPRRRrtvg lsestiseal qqlaiktfgq ppssgdagss tgagaaesgg ptspgepaps etgsassmpp legepgdpdl esdqvelqpp pqgggvapgs gsgswstcse eddttvccsm syswtgalit pcspeeeklp inplsnsllr yhnkvycTTS KSASQRAKKV TFDRTQVlda hydsvlkdik laaskvsarl ltleEACQLT PPHSARSKYG fgakevrsls gravnhiksv wkdlledpqt pipttimakn evfcvDPAKG GKKPARLIVY PDlgvrvcek malyditqkl pqavmgasyg fqyspaqrve yllkawaeKK DPMGFSYDTR CFdstvterd irteesiyqa cslpeearta ihslterlyv ggpmfnskgq tcgyrrcras gvlttsmgnt itcyvkalaa ckaagivapt mlvcgddlvv iSESQGTEED ERnlraftea mTRYSAPPGD Pprpeydlel itscsSNVSV ALGPRGRRRY YLTRDPTTPL araawetvRH SPINSWLGNi iqyaptiwvr mvlmthffsi lmvqdtldqn lnfemygsvy svnpldlpai ierlhgldaf smhtyshhel trvasalrkl gapplrvwks raravrasLI SRGGKAAVCg rylfnwavkt klkltplpea rlldlsswft vgagggdifh svsrarprsl lfgllllfvg vglfllpar
>F5BWY6_REM465
1-17, 47-74, 103-113, 1207-1217, 1477-1496, 1735-1753, 2187-2211, 2256-2265, 2316-2329, 2350-2393, 2405-2433, 2480-2489, 2764-2771
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKARR PEGRtwaqpg ypwplygneg cgwagwllsp rgSRPSWGPT DPRrrsrnlg kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnssgl yhvtndcpns sivyeaadai lhtpgcvpcv regnasrcwv avtptvatrd gklpttqlrr hidllvgsat lcsalyvgdl cgsvflvgql ftfsprrhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvvaqllri pqaimdmiag ahwgvlagia yfsmvgnwak vlvvlllfag vdaethvtgg nagrttaglv glltpgakqn iqlintngsw hinstalncn eslntgwlag lfyqhkfnss gcperlascr rltdfaqgwg pisyangsgl derpycwhyp prpcgivpak svcgpvycft pspvvvgttd rsgaptyswg andtdvfvln ntrpplgnwf gctwmnstgf tkvcgappcv iggvgnntll cptdcfrkhp eatysrcgsg pwitprcmvd ypyrlwhypc tinytifkvr myvggvehrl eaacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvilnaasla gthglvsflv ffcfawylkg rwvpgaayal ygmwplllll lalpqrayal dtevaascgg vvlvglmalt lspyykryis wcmwwlqyfl trveaqlhvw vpplnvrggr davillmcvv hptlvfditk lllaifgplw ilqasllkvp yfvrvqgllr icalarkiag ghyvqmaiik lgaltgtyvy nhltplrdwa hnglrdlava vepvvfsrme tklitwgadt aacgdiingl pvsarrgqei llgpadgmvs kgwrllapit ayaqqtrgll gaivvsmtgr drteqagevq ilstvsqsfl gttisgvlwt vyhgagnktl aglrgpvtqm yssaegdlvg wpsppgtksl epckcgavdl ylvtrnadvi parrrgdkrg allsprpist lkgssggpvl cprghvvglf raavcsrgva ksidfipvet ldvvtrSPTF SDNSTPPavp qtyqvgylha ptgsgkstkv pvayaalgyk vlvlnpsvaa tlgfgaylsk ahginpnirt gvrtvmtgea itystygkfl adggcasgay diiicdecha vdatsilgig tvldqaetag vrltvlatat ppgsvttphp dieevglgre geipfygrai plscikggrh lifchskkkc delaaalrgm glnavayyrg ldvsiipaqg dvvvvatdal mtgytgdfds vidcnvavtq avdfsldptf tittqtVPQD AVSRSQRRGR TGRGRQgtyr yvstgerasg mfdsvvlcec ydagaawydl tpaettvrlr ayfntpglpv cqdhlefwea vftglthida hflsqtkqag enfaylvayq atvcarakap ppswdamwkc larlkptlag ptpllyrlgp itnevtlthp gtkyiatcmq adlevmtstw vlaggvlaav aayclatgcv siigrlhvnq rvvvapdkev lyeafdemee casraaliee gqriaemlks kiqgLLQQAS KQAQDIQPAM QASwpkveqf warhmwnfis giqylaglst lpgnpavasm mafsaaltsp lststtilln imggwlasqi appagatgfv vsglvgaavg siglgkvlvd ilagygagis galvafkims gekpsmedvi nllpgilspg alvvgvicaa ilrrhvgpge gavqwmnrli afasrgnhva pthyvtesda sqrvtqllgs ltitsllrrl hnwitedcpi pcsgswlrdv wdwvctiltd fknwltsklf pklpglpfis cqkgykgvwa gtgimttrcp cganisgnvr lgsmritgpk tcmntwqgtf pincytegqc apkpptnykt aiwrvaasey aevtqhgsys yvtglttdnl kipcqlpspe ffswvdgvqi hrfaptpkpf frdevsfcvg lnsyavgsql pcepepdadv lrsmltdpph itaetaARRL ARGSPPSEAS SSVSQLSAPS Lratctthsn tydvdmvdan llmeggvaqt epesrvpvld flepmAEEES DLEPSipsec mlprsgfpra lpawarpdyn pplveswrrp dyqpptvagc alpppKKAPT PPPRRRRTVg lsestiseal qqlaiktfgQ PPSSGDAGSS TGAGAAESGG PTSPGEPAPS ETGSASSMPP LEGepgdpdl esdqVELQPP PQGGGVAPGS GSGSWSTCSE EDDttvccsm syswtgalit pcspeeeklp inplsnsllr yhnkvycttS KSASQRAKKv tfdrtqvlda hydsvlkdik laaskvsarl ltleeacqlt pphsarskyg fgakevrsls gravnhiksv wkdlledpqt pipttimakn evfcvdpakg gkkparlivy pdlgvrvcek malyditqkl pqavmgasyg fqyspaqrve yllkawaekk dpmgfsydtr cfdstvterd irteesiyqa cslpeearta ihslterlyv ggpmfnskgq tcgyrrcras gvlttsmgnt itcyvkalaa ckaagivapt mlvcgddlvv iseSQGTEED Ernlraftea mtrysappgd pprpeydlel itscssnvsv algprgrrry yltrdpttpl araawetvrh spinswlgni iqyaptiwvr mvlmthffsi lmvqdtldqn lnfemygsvy svnpldlpai ierlhgldaf smhtyshhel trvasalrkl gapplrvwks raravrasli srggkaavcg rylfnwavkt klkltplpea rlldlsswft vgagggdifh svsrarprsl lfgllllfvg vglfllpar
| JOB-ID | F5BWY6_064323Zzg-C38AAQEAACQmmU4AAABJ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | F5BWY6 |
| Description | tr|F5BWY6|F5BWY6_9HEPC Genome polyprotein OS=Recombinant Hepatitis C virus H77(5'UTR-NS2)/JFH1_V787A,Q1247L OX=1006431 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3029 |
| Download predictions | smoothed scores raw scores |