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>O59245_LOOPS
14-29, 50-109, 163-180, 187-221, 229-242, 255-269, 311-328, 333-356, 378-388, 401-412, 440-448, 457-472, 492-502, 515-529, 544-572, 578-615, 649-667, 701-711, 721-731, 740-806, 834-844, 864-871
mvvplkridk irwEIPKFDK RMRVPGRVYa devllekmkn drtleqatnV AMLPGIYKYS IVMPDGHQGY GFPIGGVAAF DVKEGVISPG GIGYDINCLA PGTRVLTEHg ywlkieempe kfklqrlrvy nieeghndfs kvvfvaerev gseekairiv teSGKVIEGS EDHPVLTPEG yvylrnVKEG DYILVYPFEG VPYEEKKGVI LDESAFEGED PqvvkflrER NLIPLQWKDP KVgilarilg falaNGYISE NDNLTFHGKe evlrevrkdl eelgieaiva eedklkvtsr efaflleklg MAHDSIPEWI IEGPLWIKrn flAGLFGANG SIVEFKGDVP LPITLThsre llndvsrile gfkvrakIKM GKNGSYQLvi ededsirnfl GRINYEYDPE KKargliaya ylkfkelmkg nlmtfeefaR DRGYEGGFva ekvievKSVK PEYDKFYDIG VYhsahnfia ngivvhncgv rLIRTNLTEK EVrprikqlv dtlfKNVPSG VGSQGRIKLh wtqiddvlvd gakWAVDNGY GWERDLERLE EGGRMEGADP EAvsqraKQR GAPQLGSLGS GNHFLEVQVV DKIFDPEVAK AYGLFegqvv vmvhtgsrgl ghqvasdylr imerairkYR IPWPDRELVS VPFQSEEgqr yfsamkaaan fawanrqmit hwvresfqev FKQDPEGDLG Mdivydvahn IGKVEEHEVD GkrvkvivhR KGATRAFPPG HEAVPRLYRD VGQPVLIPGS MGTASYILAG TEGAMKETFG STCHGAGRVL SRKAATrqyr gdrirqelln rgiyvraasm rvvAEEAPGA YKNVdnvvkv vseagiaklv armRPIGVAK G
>O59245_HOTLOOPS
1-26, 37-50, 133-142, 148-179, 231-242, 288-298, 375-392, 404-413, 494-504, 515-528, 582-591, 649-658, 723-733, 741-757, 792-824, 836-847, 858-871
MVVPLKRIDK IRWEIPKFDK RMRVPGrvya devlleKMKN DRTLEQATNV amlpgiykys ivmpdghqgy gfpiggvaaf dvkegvispg gigydincla pgtrvltehg ywlkieempe kfklqrlrvy niEEGHNDFS KVvfvaeREV GSEEKAIRIV TESGKVIEGS EDHPVLTPEg yvylrnvkeg dyilvypfeg vpyeekkgvi ldesafeged pqvvkflrer NLIPLQWKDP KVgilarilg falangyise ndnltfhgke evlrevrkdl eelgieaIVA EEDKLKVTsr efaflleklg mahdsipewi iegplwikrn flaglfgang sivefkgdvp lpitlthsre llndvsrile gfkvRAKIKM GKNGSYQLVI EDedsirnfl griNYEYDPE KKArgliaya ylkfkelmkg nlmtfeefar drgyeggfva ekvievksvk peydkfydig vyhsahnfia ngivvhncgv rliRTNLTEK EVRPrikqlv dtlfKNVPSG VGSQGRIKlh wtqiddvlvd gakwavdngy gwerdlerle eggrmegadp eavsqrakqr gAPQLGSLGS Gnhflevqvv dkifdpevak ayglfegqvv vmvhtgsrgl ghqvasdylr imerairkYR IPWPDRELvs vpfqseegqr yfsamkaaan fawanrqmit hwvresfqev fkqdpegdlg mdivydvahn igKVEEHEVD GKRvkvivhr KGATRAFPPG HEAVPRLyrd vgqpvlipgs mgtasyilag tegamketfg sTCHGAGRVL SRKAATRQYR GDRIRQELLN RGIYvraasm rvvaeEAPGA YKNVDNVvkv vseagiaKLV ARMRPIGVAK G
>O59245_REM465
565-582
mvvplkridk irweipkfdk rmrvpgrvya devllekmkn drtleqatnv amlpgiykys ivmpdghqgy gfpiggvaaf dvkegvispg gigydincla pgtrvltehg ywlkieempe kfklqrlrvy nieeghndfs kvvfvaerev gseekairiv tesgkviegs edhpvltpeg yvylrnvkeg dyilvypfeg vpyeekkgvi ldesafeged pqvvkflrer nliplqwkdp kvgilarilg falangyise ndnltfhgke evlrevrkdl eelgieaiva eedklkvtsr efaflleklg mahdsipewi iegplwikrn flaglfgang sivefkgdvp lpitlthsre llndvsrile gfkvrakikm gkngsyqlvi ededsirnfl grinyeydpe kkargliaya ylkfkelmkg nlmtfeefar drgyeggfva ekvievksvk peydkfydig vyhsahnfia ngivvhncgv rlirtnltek evrprikqlv dtlfknvpsg vgsqgriklh wtqiddvlvd gakwavdngy gwerdlerle eggrMEGADP EAVSQRAKQR GApqlgslgs gnhflevqvv dkifdpevak ayglfegqvv vmvhtgsrgl ghqvasdylr imerairkyr ipwpdrelvs vpfqseegqr yfsamkaaan fawanrqmit hwvresfqev fkqdpegdlg mdivydvahn igkveehevd gkrvkvivhr kgatrafppg heavprlyrd vgqpvlipgs mgtasyilag tegamketfg stchgagrvl srkaatrqyr gdrirqelln rgiyvraasm rvvaeeapga yknvdnvvkv vseagiaklv armrpigvak g
| JOB-ID | O59245_062620Z7q-i38AAQEAAFgZeooAAABE |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | O59245 |
| Description | sp|O59245|RTCB_PYRHO tRNA-splicing ligase RtcB OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=rtcB PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 871 |
| Download predictions | smoothed scores raw scores |