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>O90417_LOOPS
1-11, 19-27, 100-111, 142-239, 271-278, 291-312, 322-336, 355-432, 439-493, 512-526, 571-581, 590-614, 620-652, 664-698, 714-727, 792-817, 880-899, 917-953, 968-980, 1011-1138, 1145-1156, 1289-1299, 1350-1359, 1365-1378, 1394-1403, 1441-1467, 1479-1489, 1500-1525, 1559-1599, 1606-1666, 1671-1690, 1696-1707, 1742-1761, 1771-1800, 1819-1851, 1893-1908, 1917-1992, 2001-2031, 2058-2082, 2091-2103, 2134-2142, 2219-2227, 2241-2253, 2287-2323, 2345-2365, 2425-2441, 2456-2467, 2482-2509, 2518-2535, 2572-2585, 2596-2614, 2629-2647, 2653-2685, 2697-2708, 2730-2746, 2770-2801, 2819-2847, 2870-2899, 2915-2924, 2952-2961, 2969-2976, 2981-3000, 3019-3042, 3053-3074, 3109-3118, 3125-3132, 3155-3172, 3191-3203, 3224-3244, 3251-3282, 3314-3338, 3353-3388
MTKKPGGPGK NrainmlkRG LPRVFPLvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgt lidavnkrgR KQNKRGGNEG Pimwlaslav viacagamkl snfqgkllmt iNNTDIADVI VIPTSKGENR CWVRAIDVGY MCEDTITYEC PKLTMGNDPE DVDCWCDNQE VYVQYGRCTR TRHSKRSKRS VSVQTHGESS LVNKKEAWLd stkatrylmk tenwiirnpg yaflaailgw MLGSNNGQrv vftillllva PAYSFNCLGM GNRDFVEGAS GAtwvdlvle gDSCLTIMAN DKPTLDvrmi nieasqlaev rsycYHASVT DISTVARCPT TGEAHNEKGA DSSYVCKQGF TDRGWGNGCG LFGKGSIDTC AKFSCTSKAI GRTIQPENIK YEvgifvhGT TTSENHGNYS AQVGASQAAK FTVTPNAPST TLKLGDYGEV TLDCEPRSGL NTEafyvmtv gsksllvhre wFHDLALPWT SPSSTAwrnr ellmefeeah atkqsvvalg sqegslhqal agaivveyss SVKLTSGHLK CrlkmdklaL KGTTYGMCTE KFSFAKNPAD TGHGtvvieL SYSGSDGPCK IPIVSVASLN DMTPVGRLVT VNpfvatssa nskVLVEMEP PFGDSYIVVG RGDKQINHHW HKAGSTLGka fsttlkgaqr laaLGDTAWD FGSIGGVfns igkavhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nVHADTGCAI DITRKEMRCG SGIFVHNdve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdL SVVVNKPVGR YRSAPKRLSm tqekfemgwk awgksiLFAP ELANSTFVVD GPETKECPDE HRAWNSMQIE DFGfgitstr vwlkireEST DECDGAIIGT avkghvavhs dlsywiesry ndtwklerav FGEIKSCTWP ETHTLWGDGV EESELIIPHT IAGPKSKHNR REGYKTQNQG PWDENGIVLD FDYCPGTKVT ITEDCGKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFRTE NGCWYGMEIR PVRHDETTlv rsqvDAFNGE MVDPFQlgll vmflatqevl rkrwtarlti pavlgallvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasvdlqig vhgilnaaai awmivraiTF PTTSSVTMPv lalltpgmra lyldtyriil lvigicsllq erkktmakkk gavllglalT STGWFSPTTi aaglMVCNPN KKRGWPATef lsavglmfai vggLAELDIE SMSipfmlag lmavsyvvsg katdmwldra adiswemdaa ITGSSRRLDV KLDDDGDFHL IDDPGVPwkv wvlrmsciGL AALTPWAIVp aafgywltlK TTKRGGVFWD TPSPKPCSKG DTTTGvyrim argilgtyqa gvgvmyenvf htlwhttrGA AIMSGEGKLT PYWGSVKEDR IAYGGPWRFD RKWNGTDDVq vivvePGKAA VNIQTKPGVF RTPLGEVGAV SLDYPRGTSG SPILDSNGDI IGLYGNGVEL GDGSYVsaiv QGDRQEEPVP EAYTPNMLKK rqmtvLDLHP GSGKTRKilp qiikdaiqqr lrtavlaptr vvaaemaeal rGLPVRYQTS AVQREHQGNE Ivdvmchatl THRLMSPNRV PNYNLFVMDE AHFTDPASIA argyiatkve lgeaaaifMT ATPPGTTDPF PDSNAPIHDL QDEIPDRAWS Sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrKSYDTEYP KCKNGDWDfv ittdisEMGA NFGASRVIDC RKSVKPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQVGDEYHYG GATSEDDSNL AHwteakiml DNIHMPNGLV AQLYGPEREK AFTMDGEYRL Rgeekknfle llrtadlpvw laykvasNGI QYTDRKWCFD GPRTNAILED NTeveivtrm GERKILKPRW LDArvyadhq alkwfkdfaa gkrsaisfie vlgRMPEHFM GKtrealdtm ylvataergg kahrmaleel pdaletvtli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwAA EVPGTKIagt llialllmvv LIPEPEKQKS QTDnqlavfl icvltvvgvv aaneygmlek tkadlkSMFG GKTQASGLTG LPSMALDLRP ATAWALYGGS TVVltpllkh litseyvtts lasiNSQAGS LFVLPRGVPF TDLDLtvglv flgcwgqitl ttfltamvlv tlhygymlpg wqaealraaq rrtaagimkn avvdGMVATD VPELEKTTPL Mqkkigqvll iggsvAAFLV NPNVTTVrea gvlvtaatlt lWDNGASAAW NSTTATGLCH VMRGSYLAGg siawtliKNA DKPSLKRGRP GGRTLgeqwk eklnamsree ffkyrreaii evdrtearra rRENNIVGGH PVSRGsaklr wlvekGFVSP IGKVIDLGCG RGGWsyyaat lkrvqevrGY TKGGAGHEEP MLMQSYGwnl vsLKSGVDVF YKPSEPSDTL FCDIGESSPS PEVEEqrtlr vlemtsDWLH RGPREFCIkv lcpympkvie kmevlqrrfG GGLVRLPLSR NSNHEMywvs gaagnvvhav nmtsqvllgR MDRTVWRGPK YEEDVNLGSG TRAVGKGEVH Snqekikkri qklkeefaTT WHKDPEHPYR TWTYHGSYEV KATGSASslv ngvvklmskp wdaianvttM AMTDTTPFGQ QRVFKEKVDT KAPEPPAGVr evlnettnwl wahlSREKRP RLCTkeefik kvnsnaalga vfaeqnqwst aREAVNDPRF WemvdeerEN HLRGEChtci YNMMGKREKK PGEFGKAKGS raiwfmwlga rylefealGF LNEDHWLSRE NSGGGVEGSG VQklgyilrd iaGKQGGKMY ADDTAGWDTR ITRTdlenea kvlelldgeh rklaraiiel tyrhkvvkVM RPAAEGKTvm dvisREDQRG SGqvvtyaln tftniavqlv rlmeAEGVIG PQHLEQLPRK NKiavrtwlf engeervtrm AISGDDCVVK PLDdrfatal hflnamskvr kdiQEWKPSH GWHDWQQVPF CSNHfqeivm KDGRSIVDPC RGQDELIGRA RISPGAGWNV KDtaclakay aqmwlllyfh rrdlrlmana icsAVPVDWV PTGRTSWSIH SKGEWMTTed mlqvwnrvwi eeNEWMMDKT PIASWTDVPY VGKREDIWCG SLIGTRSRat waeniyaain qvravigken yvdymtslrr yedvltqedr vi
>O90417_HOTLOOPS
1-26, 90-112, 150-163, 206-241, 374-384, 419-430, 465-478, 515-524, 574-584, 604-612, 875-902, 1040-1067, 1080-1119, 1128-1137, 1505-1524, 1608-1623, 1673-1690, 1894-1906, 1921-1930, 1936-1972, 2073-2100, 2517-2539, 2558-2587, 2672-2687, 2695-2704, 2778-2806, 2818-2830, 2889-2903, 2912-2923, 2943-2952, 3099-3122, 3159-3173, 3267-3279, 3315-3339, 3418-3432
MTKKPGGPGK NRAINMLKRG LPRVFPlvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgT LIDAVNKRGR KQNKRGGNEG PImwlaslav viacagamkl snfqgkllmt inntdiadvI VIPTSKGENR CWVraidvgy mcedtityec pkltmgndpe dvdcwcdnqe vyvqyGRCTR TRHSKRSKRS VSVQTHGESS LVNKKEAWLD Stkatrylmk tenwiirnpg yaflaailgw mlgsnngqrv vftillllva paysfnclgm gnrdfvegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt tgeAHNEKGA DSSYvckqgf tdrgwgngcg lfgkgsidtc akfsctskAI GRTIQPENIK yevgifvhgt ttsenhgnys aqvgasqaak ftvtPNAPST TLKLGDYGev tldceprsgl nteafyvmtv gsksllvhre wfhdLALPWT SPSStawrnr ellmefeeah atkqsvvalg sqegslhqal agaivveyss svkLTSGHLK CRLKmdklal kgttygmcte kfsFAKNPAD TGhgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg rgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igkavhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkENAVDL SVVVNKPVGR YRSAPKRLSM TQekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgeiksctwp ethtlwgdgv eeseliiphT IAGPKSKHNR REGYKTQNQG PWDENGIvld fdycpgtkvT ITEDCGKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFRTe ngcwygmEIR PVRHDETtlv rsqvdafnge mvdpfqlgll vmflatqevl rkrwtarlti pavlgallvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasvdlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigicsllq erkktmakkk gavllglalt stgwfsptti aaglmvcnpn kkrgwpatef lsavglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwldra adiswemdaa itgssrrldv kldddgdfhl iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrGGVFWD TPSPKPCSKG DTTTgvyrim argilgtyqa gvgvmyenvf htlwhttrga aimsgegklt pywgsvkedr iayggpwrfd rkwngtddvq vivvepgKAA VNIQTKPGVF RTPlgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv qgDRQEEPVP EAYTPNMLKK rqmtvldlhp gsgktrkilp qiikdaiqqr lrtavlaptr vvaaemaeal rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdeipdraws sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrkSYDTEYP KCKNGDwdfv ittdisemga NFGASRVIDC rksvkPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gpRTNAILED NTEVEIVTRM GERKILKPRW ldarvyadhq alkwfkdfaa gkrsaisfie vlgrmpehfm gktrealdtm ylvataergg kahrmaleel pdaletvtli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqks qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfg gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqitl ttfltamvlv tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelekttpl mqkkigqvll iggsvaaflv npnvttvrea gvlvtaatlt lwdngasaaw nsttatglch vmrgsylagg siawtlIKNA DKPSLKRGRP GGRTLGEQWk eklnamsree ffkyrreAII EVDRTEARRA RRENNIVGGH PVSRGSAklr wlvekgfvsp igkvidlgcg rggwsyyaat lkrvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fCDIGESSPS PEVEEQRtlr vlemTSDWLH RGPRefcikv lcpympkvie kmevlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrGPK YEEDVNLGSG TRAVGKGEVH SNQEKIkkri qklkeefATT WHKDPEHPYR twtyhgsyev katgsasslv ngvvklmskp wdaianvttm amtdttpfgq qrvfkekvDT KAPEPPAGVR EVLnettnwl wAHLSREKRP RLCtkeefik kvnsnaalga vfAEQNQWST AReavndprf wemvdeeren hlrgechtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsre nsgggvegsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rklaraiiEL TYRHKVVKVM RPAAEGKTVM DVisredqrg sgqvvtyaln tftniavqlv rlmeaegvIG PQHLEQLPRK NKIavrtwlf engeervtrm aisgddcvvk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivdpc rgqdelIGRA RISPGAGWNv kdtaclakay aqmwlllyfh rrdlrlmana icsaVPVDWV PTGRTSWSIH SKGEWMTTEd mlqvwnrvwi eenewmmdkt piaswtdvpy vgkrediwcg sligtrsrat waeniyaain qvravigken yvdymtsLRR YEDVLTQEDR VI
>O90417_REM465
1-8, 210-232, 1044-1058, 1957-1965, 2677-2685, 2795-2805, 3030-3037
MTKKPGGPgk nrainmlkrg lprvfplvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgt lidavnkrgr kqnkrggneg pimwlaslav viacagamkl snfqgkllmt inntdiadvi viptskgenr cwvraidvgy mcedtityec pkltmgndpe dvdcwcdnqe vyvqygrctR TRHSKRSKRS VSVQTHGESS LVnkkeawld stkatrylmk tenwiirnpg yaflaailgw mlgsnngqrv vftillllva paysfnclgm gnrdfvegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt tgeahnekga dssyvckqgf tdrgwgngcg lfgkgsidtc akfsctskai grtiqpenik yevgifvhgt ttsenhgnys aqvgasqaak ftvtpnapst tlklgdygev tldceprsgl nteafyvmtv gsksllvhre wfhdlalpwt spsstawrnr ellmefeeah atkqsvvalg sqegslhqal agaivveyss svkltsghlk crlkmdklal kgttygmcte kfsfaknpad tghgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg rgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igkavhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdl svvvnkpvgr yrsapkrlsm tqekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgeiksctwp ethtlwgdgv eeseliipht iagPKSKHNR REGYKTQNqg pwdengivld fdycpgtkvt itedcgkrgp svrtttdsgk litdwccrsc slpplrfrte ngcwygmeir pvrhdettlv rsqvdafnge mvdpfqlgll vmflatqevl rkrwtarlti pavlgallvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasvdlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigicsllq erkktmakkk gavllglalt stgwfsptti aaglmvcnpn kkrgwpatef lsavglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwldra adiswemdaa itgssrrldv kldddgdfhl iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrggvfwd tpspkpcskg dtttgvyrim argilgtyqa gvgvmyenvf htlwhttrga aimsgegklt pywgsvkedr iayggpwrfd rkwngtddvq vivvepgkaa vniqtkpgvf rtplgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv qgdrqeepvp eaytpnmlkk rqmtvldlhp gsgktrkilp qiikdaiqqr lrtavlaptr vvaaemaeal rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdeipdraws sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrksydteyp kckngdwdfv ittdisemga nfgasrvidc rksvkptile egegrvilgn pspitsASAA QRRGRvgrnp nqvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gprtnailed nteveivtrm gerkilkprw ldarvyadhq alkwfkdfaa gkrsaisfie vlgrmpehfm gktrealdtm ylvataergg kahrmaleel pdaletvtli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqks qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfg gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqitl ttfltamvlv tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelekttpl mqkkigqvll iggsvaaflv npnvttvrea gvlvtaatlt lwdngasaaw nsttatglch vmrgsylagg siawtlikna dkpslkrgrp ggrtlgeqwk eklnamsree ffkyrreaii evdrtearra rrennivggh pvsrgsaklr wlvekgfvsp igkvidlgcg rggwsyyaat lkrvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fcdigeSSPS PEVEEqrtlr vlemtsdwlh rgprefcikv lcpympkvie kmevlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrgpk yeedvnlgsg travGKGEVH SNQEKikkri qklkeefatt whkdpehpyr twtyhgsyev katgsasslv ngvvklmskp wdaianvttm amtdttpfgq qrvfkekvdt kapeppagvr evlnettnwl wahlsrekrp rlctkeefik kvnsnaalga vfaeqnqwst areavndprf wemvdeeren hlrgechtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsrE NSGGGVEgsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rklaraiiel tyrhkvvkvm rpaaegktvm dvisredqrg sgqvvtyaln tftniavqlv rlmeaegvig pqhleqlprk nkiavrtwlf engeervtrm aisgddcvvk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivdpc rgqdeligra rispgagwnv kdtaclakay aqmwlllyfh rrdlrlmana icsavpvdwv ptgrtswsih skgewmtted mlqvwnrvwi eenewmmdkt piaswtdvpy vgkrediwcg sligtrsrat waeniyaain qvravigken yvdymtslrr yedvltqedr vi
| JOB-ID | O90417_213953Z@sLqX8AAQEAACPT9-kAAABM |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | O90417 |
| Description | tr|O90417|O90417_9FLAV Genome polyprotein OS=Japanese encephalitis virus OX=11072 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3432 |
| Download predictions | smoothed scores raw scores |