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>O92956_LOOPS
13-23, 36-54, 98-219, 230-255, 266-274, 282-293, 322-365, 385-402, 413-438, 446-455, 463-471, 493-589, 596-604, 614-675, 716-739, 751-767, 787-828, 835-884, 916-954, 967-999, 1019-1034, 1041-1064, 1088-1108, 1119-1134, 1144-1177, 1203-1213, 1225-1232, 1255-1298, 1316-1356, 1393-1408, 1421-1431, 1453-1463, 1479-1516, 1526-1579, 1586-1603
meavikviss acKTYCGKTS PSKkeigaml sllqkEGLLM SPSDLYSPGS WDPItaalsq ramvlgksge lktwglvlga lkaareeqvt seqakfwLGL GGGRVSPPGP ECIEKPATER RIDKGEEVGE TTVQRDAKMA PEETATPKTV GTSCYHCGTA IGCNCATASA PPPPYVGSGL YPSLAGVGEQ QGQGGDTPRG AEQPRAEPGH AGLAPGPALt dwarireelA STGPPVVAMP VVIKTEGPAW TPLEPklitr ladtvRTKGL RSPItmaeve aLMSSPLLPH DVTnlmrvil gpapyalwmd awgvqlqtvi aAATRDPRHP ANGQGRGERT NLDRLKGLAD GMVGNPQGQA ALLRPgelva itasalqafr evarLAEPAG PWADITQGPS ESfvdfanrl ikAVEGSDLP PSARAPVIID CFRQKSQPdi qqlirAAPST LTTPGeiiky vlDRQKIAPL Tdqgiaaams saiqplvmav vnRERDGQTG SGGRARRLCY TCGSPGHYQA QCPKKRKSGN SRERCQLCDG MGHNAKQCRR RDSNQGQRPG RGLSSGPWPV SEQPAVSLAM TMEHKDRPLv rviltNTGSH PVKQrsvyit allDSGADIT IISEEDWPTD WPVVDTANPQ IHGIGGGIPM RKSRDMIELG VINRDGSLER PLLLFpavam vrgsilgrdc lqglglrltn lvgratvltv alhlaIPLKW KPDHTPVWID QWPLPEGKLv altqlvekel QLGHIEPSLS CWNTPVFvir kasgsyrllh dlravnAKLV PFGAVQQGAP VLSALPRGWP LMVLDLKDCF FSIPLAEQdr eafaFTLPSV NNQAPARRFQ WKVLPQGMTC SPTICQLVVG QVLEPLRLKH PSLRmlhymd dlllaasshd gleaageevi ntlerAGFTI SPDKIQREPG VQYLGYKLGS TYVAPVGLVA EPRIatlwdv qklvgsLQWL RPALGIPPRL MGPFYEQLRG SDPNEAREWn ldmkmawrei vqlsttaaLE RWDPALPLEG AVVRceqgai GVLGQGLSTH PRPCLWLFST QPTKaftawl evltllitkl rasavrtFGK EVDILLLPAC FREDLPLPeg illalrgfAG KIRSSDTPSI FDIArplhvs lkvRVTDHPV PGPTVFTDAS SSTHKGVVVW REGPRWEike iadlgasvqq learavamal llWPTTPTNV VTDsafvakm llkmGQEGVP STaaafiled alsqrsamaa vlhvRSHSEV PGFFTEGNDV ADSQATFQAY PLREAKDLHT TLHIGPRAls kacnismqqa revvqTCPHC NSAPALEAGV NPRGLGPLQI WQTDFTLEPR MAPRSWlavt vdtassaivv tqhgrvtsva aqhhwataia vlGRPKAIKT DNGSCFTSks trewlarwgi AHTTGIPGNS Qgqamveran rllkdkirvl aeGDGFMKRI PASkqgella kamyalnhFE RGENTKTPVQ KHWRPTVLTE GPPVKIRIET GEWEKGwnvl vwgrgYAAVK NRDTDKVIWV PSRKVKPDIT QKDEVTKKDE ASPLFAGSSD WIPWGDEQEg lqeeaASNKQ EGPGEDTLAA NES
>O92956_HOTLOOPS
10-23, 97-150, 231-241, 246-257, 324-341, 414-423, 445-454, 495-505, 513-532, 539-570, 595-605, 641-653, 753-764, 917-929, 1152-1168, 1390-1405, 1423-1433, 1451-1463, 1480-1519, 1528-1573, 1585-1603
meavikvisS ACKTYCGKTS PSKkeigaml sllqkegllm spsdlyspgs wdpitaalsq ramvlgksge lktwglvlga lkaareeqvt seqakfWLGL GGGRVSPPGP ECIEKPATER RIDKGEEVGE TTVQRDAKMA PEETATPKTV gtscyhcgta igcncatasa ppppyvgsgl ypslagvgeq qgqggdtprg aeqpraepgh aglapgpalt dwarireela STGPPVVAMP VviktEGPAW TPLEPKLitr ladtvrtkgl rspitmaeve almsspllph dvtnlmrvil gpapyalwmd awgvqlqtvi aaaTRDPRHP ANGQGRGERT Nldrlkglad gmvgnpqgqa allrpgelva itasalqafr evarlaepag pwaditqgps esfvdfanrl ikaVEGSDLP PSArapviid cfrqksqpdi qqliRAAPST LTTPgeiiky vldrqkiapl tdqgiaaams saiqplvmav vnreRDGQTG SGGRArrlcy tcGSPGHYQA QCPKKRKSGN SRercqlcDG MGHNAKQCRR RDSNQGQRPG RGLSSGPWPV seqpavslam tmehkdrplv rvilTNTGSH PVKQRsvyit alldsgadit iiseedwptd wpvvdtanpq IHGIGGGIPM RKSrdmielg vinrdgsler plllfpavam vrgsilgrdc lqglglrltn lvgratvltv alhlaiplkw kpdhtpvwid qwplpegklv altqlvekel qlGHIEPSLS CWNTpvfvir kasgsyrllh dlravnaklv pfgavqqgap vlsalprgwp lmvldlkdcf fsiplaeqdr eafaftlpsv nnqaparrfq wkvlpqgmtc spticqlvvg qvleplrlkh pslrmlhymd dlllaasshd gleaageevi ntleraGFTI SPDKIQREPg vqylgyklgs tyvapvglva epriatlwdv qklvgslqwl rpalgipprl mgpfyeqlrg sdpnearewn ldmkmawrei vqlsttaale rwdpalpleg avvrceqgai gvlgqglsth prpclwlfst qptkaftawl evltllitkl rasavrtfgk evdilllpac fredlplpeg illalrgfag kirssdtpsi fdiarplhvs lkvrvtdhpv pGPTVFTDAS SSTHKGVVvw regprweike iadlgasvqq learavamal llwpttptnv vtdsafvakm llkmgqegvp staaafiled alsqrsamaa vlhvrshsev pgfftegndv adsqatfqay plreakdlht tlhigprals kacnismqqa revvqtcphc nsapaleagv nprglgplqi wqtdftlepr maprswlavt vdtassaivv tqhgrvtsva aqhhwataiA VLGRPKAIKT DNGSCftsks trewlarwgi ahTTGIPGNS QGQamveran rllkdkirvl AEGDGFMKRI PASkqgella kamyalnhfE RGENTKTPVQ KHWRPTVLTE GPPVKIRIET GEWEKGWNVl vwgrgyaAVK NRDTDKVIWV PSRKVKPDIT QKDEVTKKDE ASPLFAGSSD WIPwgdeqeg lqeeAASNKQ EGPGEDTLAA NES
>O92956_REM465
188-210, 495-503, 517-533, 544-568, 1580-1603
meavikviss acktycgkts pskkeigaml sllqkegllm spsdlyspgs wdpitaalsq ramvlgksge lktwglvlga lkaareeqvt seqakfwlgl gggrvsppgp eciekpater ridkgeevge ttvqrdakma peetatpktv gtscyhcgta igcncatasa ppppyvgsgl ypslagvGEQ QGQGGDTPRG AEQPRAEPGH aglapgpalt dwarireela stgppvvamp vviktegpaw tplepklitr ladtvrtkgl rspitmaeve almsspllph dvtnlmrvil gpapyalwmd awgvqlqtvi aaatrdprhp angqgrgert nldrlkglad gmvgnpqgqa allrpgelva itasalqafr evarlaepag pwaditqgps esfvdfanrl ikavegsdlp psarapviid cfrqksqpdi qqliraapst lttpgeiiky vldrqkiapl tdqgiaaams saiqplvmav vnreRDGQTG SGGrarrlcy tcgspgHYQA QCPKKRKSGN SRErcqlcdg mghNAKQCRR RDSNQGQRPG RGLSSGPWpv seqpavslam tmehkdrplv rviltntgsh pvkqrsvyit alldsgadit iiseedwptd wpvvdtanpq ihgigggipm rksrdmielg vinrdgsler plllfpavam vrgsilgrdc lqglglrltn lvgratvltv alhlaiplkw kpdhtpvwid qwplpegklv altqlvekel qlghiepsls cwntpvfvir kasgsyrllh dlravnaklv pfgavqqgap vlsalprgwp lmvldlkdcf fsiplaeqdr eafaftlpsv nnqaparrfq wkvlpqgmtc spticqlvvg qvleplrlkh pslrmlhymd dlllaasshd gleaageevi ntleragfti spdkiqrepg vqylgyklgs tyvapvglva epriatlwdv qklvgslqwl rpalgipprl mgpfyeqlrg sdpnearewn ldmkmawrei vqlsttaale rwdpalpleg avvrceqgai gvlgqglsth prpclwlfst qptkaftawl evltllitkl rasavrtfgk evdilllpac fredlplpeg illalrgfag kirssdtpsi fdiarplhvs lkvrvtdhpv pgptvftdas ssthkgvvvw regprweike iadlgasvqq learavamal llwpttptnv vtdsafvakm llkmgqegvp staaafiled alsqrsamaa vlhvrshsev pgfftegndv adsqatfqay plreakdlht tlhigprals kacnismqqa revvqtcphc nsapaleagv nprglgplqi wqtdftlepr maprswlavt vdtassaivv tqhgrvtsva aqhhwataia vlgrpkaikt dngscftsks trewlarwgi ahttgipgns qgqamveran rllkdkirvl aegdgfmkri paskqgella kamyalnhfe rgentktpvq khwrptvlte gppvkiriet gewekgwnvl vwgrgyaavk nrdtdkviwv psrkvkpdit qkdevtkkde asplfagssd wipwgdeqeG LQEEAASNKQ EGPGEDTLAA NES
| JOB-ID | O92956_045858ZukMkn8AAQEAADCSHLcAAAAL |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | O92956 |
| Description | sp|O92956|POL_RSVSB Gag-Pol polyprotein OS=Rous sarcoma virus subgroup B (strain Schmidt-Ruppin) OX=269447 GN=gag-pol PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1603 |
| Download predictions | smoothed scores raw scores |