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>P03089_LOOPS
1-19, 26-99, 120-141, 159-178, 188-229, 237-253, 262-271, 285-294, 302-320, 327-341
MAPTKRKGER KDPVQVPKLl irggvEVLEV KTGVDSITEV ECFLTPEMGD PDEHLRGFSK SISISDTFES DSPNRDMLPC YSVARIPLPN LNEDLTCGNi lmweavtlkt evigvtslmN VHSNGQATHD NGAGKPVQGT Sfhffsvgge alelqgvlFN YRTKYPDGTI FPKNATVQsq vmntehkAYL DKNKAYPVEC WVPDPTRNEN TRYFGTLTGG ENVPPVLHIt ntattvLLDE FGVGPLCKGD NLYlsavdvc gMFTNRSGSQ Qwrglsryfk vqlrKRRVKN PYPIsflltd lINRRTPRVD GQPMYGMDAQ veevrvFEGT EELPGDPDMM Ryvdkygqlq tkml
>P03089_HOTLOOPS
1-37, 66-76, 217-225, 264-275, 283-311, 330-342
MAPTKRKGER KDPVQVPKLL IRGGVEVLEV KTGVDSItev ecfltpemgd pdehlrgfsk sisisDTFES DSPNRDmlpc ysvariplpn lnedltcgni lmweavtlkt evigvtslmn vhsngqathd ngagkpvqgt sfhffsvgge alelqgvlfn yrtkypdgti fpknatvqsq vmntehkayl dknkaypvec wvpdptrnen tryfgtLTGG ENVPPvlhit ntattvllde fgvgplckgd nlylsavdvc gmfTNRSGSQ QWRGLsryfk vqLRKRRVKN PYPISFLLTD LINRRTPRVD Gqpmygmdaq veevrvfegT EELPGDPDMM RYvdkygqlq tkml
>P03089_REM465
1-12
MAPTKRKGER KDpvqvpkll irggvevlev ktgvdsitev ecfltpemgd pdehlrgfsk sisisdtfes dspnrdmlpc ysvariplpn lnedltcgni lmweavtlkt evigvtslmn vhsngqathd ngagkpvqgt sfhffsvgge alelqgvlfn yrtkypdgti fpknatvqsq vmntehkayl dknkaypvec wvpdptrnen tryfgtltgg envppvlhit ntattvllde fgvgplckgd nlylsavdvc gmftnrsgsq qwrglsryfk vqlrkrrvkn pypisflltd linrrtprvd gqpmygmdaq veevrvfegt eelpgdpdmm ryvdkygqlq tkml
| JOB-ID | P03089_140047Zt7-j38AAQEAABReA@cAAAAN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03089 |
| Description | sp|P03089|VP1_POVJC Major capsid protein VP1 OS=JC polyomavirus OX=10632 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 354 |
| Download predictions | smoothed scores raw scores |