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>P03300_LOOPS
1-27, 33-56, 62-93, 103-129, 155-278, 292-381, 388-402, 413-439, 472-489, 497-532, 538-549, 596-656, 666-681, 703-710, 721-730, 737-778, 783-815, 824-833, 839-888, 930-998, 1004-1013, 1040-1048, 1102-1126, 1189-1200, 1212-1219, 1242-1263, 1276-1297, 1302-1314, 1322-1340, 1346-1360, 1397-1412, 1417-1427, 1440-1447, 1455-1476, 1541-1568, 1583-1620, 1627-1634, 1644-1696, 1703-1717, 1723-1732, 1749-1778, 1783-1801, 1847-1874, 1895-1902, 1946-1972, 1980-1991, 2004-2040, 2060-2086, 2092-2114, 2127-2159, 2187-2197
MGAQVSSQKV GAHENSNRAY GGSTINYtti nyYRDSASNA ASKQDFSQDP SKFTEPikdv lIKTAPMLNS PNIEACGYSD RVLQLTLGNS TITtqeaans vvAYGRWPEY LRDSEANPVD QPTEPDVAAc rfytldtvsw tkesrgwwwk lpdaLRDMGL FGQNMYYHYL GRSGYTVHVQ CNASKFHQGA LGVFAVPEMC LAGDSNTTTM HTSYQNANPG EKGGTFTGTF TPDNNQTSPA RRFCPVDYLL GNGTLLGNAF VFPHQIINLR TNNCATLVlp yvnslsidsm vKHNNWGIAI LPLAPLNFAS ESSPEIPITL TIAPMCCEFN GLRNITLPRL QGLPVMNTPG SNQYLTADNF QSPCALPEFD VTPPIDIPGE VknmmelAEI DTMIPFDLSA TKkntmemyr vrLSDKPHTD DPILCLSLSP ASDPRLSHTm lgeilnyyth wagslkftfl fcgfmmatgk lLVSYAPPGA DPPKKRKEAm lgthviWDIG LQSSCTMVVP WISNTTYRQT IDDSFTEGGY ISvfyqtRIV VPLSTPREMd ilgfvsacnd fsvrllrdtt hieqkalaqg lgqmlesmid ntvreTVGAA TSRDALPNTE ASGPTHSKEI PALTAVETGA TNPLVPSDTV QTRHVVQHRS RSESSIesff argacVTIMT VDNPASTTNK Dklfavwkit ykdtvqlrrk leFFTYSRFD meltfvvtan FTETNNGHAL nqvyqiMYVP PGAPVPEKWD DYTWQTSSNP SIFYTYGTAP ARISVPYVgi snAYSHFYDG FSKVPLKDQS AALGDSLYGA ASLNDfgila vrvVNDHNPT KVTskirvYL KPKHIRVWCP RPPRAVAYYG PGVDYKDGTL TPLSTKDLTT YGFGHQNKav ytagykicny hlatqddlqn avnvmwsrdl lvtesraqgT DSIARCNCNA GVYYCESRRK YYPVSFVGPT FQYMEANNYY PARYQSHMLI GHGFASPGDC GGILRCHHgv igiITAGGEG LVAfsdirdl yayeeeameq gitnyieslG AAFGSGFTqq isdkiteltn mvtstitekl lknlikiiss lviitrnyed tttvlatlal lGCDASPWQW LRKKACDVLE IPYVIKqgds wlkkfteacn aakglewvsn kiskfidwlk ekiipqardk lefvtklrql emlenqisTI HQSCPSQEHQ eilfnnvrwl sIQSKRFAPl yaveakriqk lehtinnyiq fKSKHRIEPV CLLVHGSPGT GKSvatnlia raiaeRENTS TYSLPPDPSH FDGYKQQgvv iMDDLNQNPD GADMklfcqm vSTVEFIPPM ASLEEKGILF tsnyvLASTN SSRISPPTVA hsdalarrfa fdmdiqvmne ysrdgklnma matemcKNCH QPANFKRCCP LVcgkaIQLM DKSSRVRysi dqittmiinE RNRRSNIgnc mealFQGPLQ YKDLKIDIKT SPPPECindl lqavdsqevr dycekkgwiv nitsqvqter ninramtilq avttfaavag vvyvmyklfa GHQGAYTGLP NKKPNVPTIR TAKVQGPGfd yavamakrni vtATTSKGEF TMLGVHDNVA ILPTHASPGE SIVIDGKEVE ildakaLEDQ AGTNleitii tlkRNEKFRD IRPHIPTQIT ETNDGVLIVN TSKYPNMYVP VGAVTEQGYL NLGGRQtart lmYNFPTRAG QCGGVITctg kvIGMHVGGN GShgfaaalk rsyftqsqGE IQWMRPSKEV GYPIINAPSK TKLEPSAFhy vfEGVKEPAV LTKNDPRLKT Dfeeaifsky vgnkitevde ymkeavdhya gqlmsldint eqmcleDAMY GTDGLEALDL STSAGYPYVA MGKKkrdiln kqtrdtkemq klldTYGINL PLvtyvkdel rsktkveqgk srlieassln dsvamrmafg nlyaaFHKNP GVITGSAVGC DPDLFWSKIP VLmeeklfaF DYTGYDASLS Pawfealkmv lekIGFGDRV DYIDYLNHSH HLYKNKTYCV KGGMPSGCSG tsifnsminn liirtlllkT YKGIDLDHLK MIAYGDDVIA SYPHEVdasl lAQSGKDYGL TMTPADKSAT FETVtwenvt flkrffRADE KYPFLIHPVM PMKEIHESIR WTKDPRNTQd hvrslcllaw hngeeeynkf lakirsVPIG RALLLPEyst lyrrwldsf
>P03300_HOTLOOPS
1-24, 137-147, 599-619, 631-659, 669-685, 824-853, 926-936, 1277-1289, 1349-1358, 1418-1428, 1436-1445, 1546-1555, 1626-1666, 1785-1814, 1891-1905, 1910-1932, 2105-2115, 2185-2209
MGAQVSSQKV GAHENSNRAY GGSTinytti nyyrdsasna askqdfsqdp skftepikdv liktapmlns pnieacgysd rvlqltlgns tittqeaans vvaygrwpey lrdseanpvd qptepdvaac rfytldTVSW TKESRGWwwk lpdalrdmgl fgqnmyyhyl grsgytvhvq cnaskfhqga lgvfavpemc lagdsntttm htsyqnanpg ekggtftgtf tpdnnqtspa rrfcpvdyll gngtllgnaf vfphqiinlr tnncatlvlp yvnslsidsm vkhnnwgiai lplaplnfas esspeipitl tiapmccefn glrnitlprl qglpvmntpg snqyltadnf qspcalpefd vtppidipge vknmmelaei dtmipfdlsa tkkntmemyr vrlsdkphtd dpilclslsp asdprlshtm lgeilnyyth wagslkftfl fcgfmmatgk llvsyappga dppkkrkeam lgthviwdig lqssctmvvp wisnttyrqt iddsfteggy isvfyqtriv vplstpremd ilgfvsacnd fsvrllrdtt hieqkalaqg lgqmlesmid ntvretvgAA TSRDALPNTE ASGPTHSKEi paltavetga TNPLVPSDTV QTRHVVQHRS RSESSIESFf argacvtiMT VDNPASTTNK DKLFAvwkit ykdtvqlrrk lefftysrfd meltfvvtan ftetnnghal nqvyqimyvp pgapvpekwd dytwqtssnp sifytygtap arisvpyvgi snayshfydg fskvplkdqs aalgdslyga aslndfgila vrvVNDHNPT KVTSKIRVYL KPKHIRVWCP RPPravayyg pgvdykdgtl tplstkdltt ygfghqnkav ytagykicny hlatqddlqn avnvmwsrdl lvtesRAQGT DSIARCncna gvyycesrrk yypvsfvgpt fqymeannyy paryqshmli ghgfaspgdc ggilrchhgv igiitaggeg lvafsdirdl yayeeeameq gitnyieslg aafgsgftqq isdkiteltn mvtstitekl lknlikiiss lviitrnyed tttvlatlal lgcdaspwqw lrkkacdvle ipyvikqgds wlkkfteacn aakglewvsn kiskfidwlk ekiipqardk lefvtklrql emlenqisti hqscpsqehq eilfnnvrwl siqskrfapl yaveakriqk lehtinnyiq fkskhriepv cllvhgspgt gksvatnlia raiaerENTS TYSLPPDPSh fdgykqqgvv imddlnqnpd gadmklfcqm vstvefippm asleekgilf tsnyvlasTN SSRISPPTva hsdalarrfa fdmdiqvmne ysrdgklnma matemcknch qpanfkrccp lvcgkaiQLM DKSSRVRYsi dqittMIINE RNRRSnignc mealfqgplq ykdlkidikt spppecindl lqavdsqevr dycekkgwiv nitsqvqter ninramtilq avttfaavag vvyvmyklfa ghqgaYTGLP NKKPNvptir takvqgpgfd yavamakrni vtattskgef tmlgvhdnva ilpthaspge sividgkeve ildakALEDQ AGTNLEITII TLKRNEKFRD IRPHIPTQIT ETNDGVlivn tskypnmyvp vgavteqgyl nlggrqtart lmynfptrag qcggvitctg kvigmhvggn gshgfaaalk rsyftqsqge iqwmrpskev gypiinapsk tklepsafhy vfegVKEPAV LTKNDPRLKT DFEEAIFSKY VGNKitevde ymkeavdhya gqlmsldint eqmcledamy gtdglealdl stsagypyva mgkkkrdiln kqtrdtkemq KLLDTYGINL PLVTYvkdeL RSKTKVEQGK SRLIEASSLN DSvamrmafg nlyaafhknp gvitgsavgc dpdlfwskip vlmeeklfaf dytgydasls pawfealkmv lekigfgdrv dyidylnhsh hlyknktycv kggmpsgcsg tsifnsminn liirtlllkt ykgidldhlk miaygddvia syphevdasl laqsgkdygl tmtpADKSAT FETVTwenvt flkrffrade kypflihpvm pmkeihesir wtkdprntqd hvrslcllaw hngeeeynkf lakiRSVPIG RALLLPEYST LYRRWLDSF
>P03300_REM465
1-14, 38-50, 609-616, 640-655
MGAQVSSQKV GAHEnsnray ggstinytti nyyrdsaSNA ASKQDFSQDP skftepikdv liktapmlns pnieacgysd rvlqltlgns tittqeaans vvaygrwpey lrdseanpvd qptepdvaac rfytldtvsw tkesrgwwwk lpdalrdmgl fgqnmyyhyl grsgytvhvq cnaskfhqga lgvfavpemc lagdsntttm htsyqnanpg ekggtftgtf tpdnnqtspa rrfcpvdyll gngtllgnaf vfphqiinlr tnncatlvlp yvnslsidsm vkhnnwgiai lplaplnfas esspeipitl tiapmccefn glrnitlprl qglpvmntpg snqyltadnf qspcalpefd vtppidipge vknmmelaei dtmipfdlsa tkkntmemyr vrlsdkphtd dpilclslsp asdprlshtm lgeilnyyth wagslkftfl fcgfmmatgk llvsyappga dppkkrkeam lgthviwdig lqssctmvvp wisnttyrqt iddsfteggy isvfyqtriv vplstpremd ilgfvsacnd fsvrllrdtt hieqkalaqg lgqmlesmid ntvretvgaa tsrdalpnTE ASGPTHskei paltavetga tnplvpsdtV QTRHVVQHRS RSESSiesff argacvtimt vdnpasttnk dklfavwkit ykdtvqlrrk lefftysrfd meltfvvtan ftetnnghal nqvyqimyvp pgapvpekwd dytwqtssnp sifytygtap arisvpyvgi snayshfydg fskvplkdqs aalgdslyga aslndfgila vrvvndhnpt kvtskirvyl kpkhirvwcp rppravayyg pgvdykdgtl tplstkdltt ygfghqnkav ytagykicny hlatqddlqn avnvmwsrdl lvtesraqgt dsiarcncna gvyycesrrk yypvsfvgpt fqymeannyy paryqshmli ghgfaspgdc ggilrchhgv igiitaggeg lvafsdirdl yayeeeameq gitnyieslg aafgsgftqq isdkiteltn mvtstitekl lknlikiiss lviitrnyed tttvlatlal lgcdaspwqw lrkkacdvle ipyvikqgds wlkkfteacn aakglewvsn kiskfidwlk ekiipqardk lefvtklrql emlenqisti hqscpsqehq eilfnnvrwl siqskrfapl yaveakriqk lehtinnyiq fkskhriepv cllvhgspgt gksvatnlia raiaerents tyslppdpsh fdgykqqgvv imddlnqnpd gadmklfcqm vstvefippm asleekgilf tsnyvlastn ssrispptva hsdalarrfa fdmdiqvmne ysrdgklnma matemcknch qpanfkrccp lvcgkaiqlm dkssrvrysi dqittmiine rnrrsnignc mealfqgplq ykdlkidikt spppecindl lqavdsqevr dycekkgwiv nitsqvqter ninramtilq avttfaavag vvyvmyklfa ghqgaytglp nkkpnvptir takvqgpgfd yavamakrni vtattskgef tmlgvhdnva ilpthaspge sividgkeve ildakaledq agtnleitii tlkrnekfrd irphiptqit etndgvlivn tskypnmyvp vgavteqgyl nlggrqtart lmynfptrag qcggvitctg kvigmhvggn gshgfaaalk rsyftqsqge iqwmrpskev gypiinapsk tklepsafhy vfegvkepav ltkndprlkt dfeeaifsky vgnkitevde ymkeavdhya gqlmsldint eqmcledamy gtdglealdl stsagypyva mgkkkrdiln kqtrdtkemq klldtyginl plvtyvkdel rsktkveqgk srlieassln dsvamrmafg nlyaafhknp gvitgsavgc dpdlfwskip vlmeeklfaf dytgydasls pawfealkmv lekigfgdrv dyidylnhsh hlyknktycv kggmpsgcsg tsifnsminn liirtlllkt ykgidldhlk miaygddvia syphevdasl laqsgkdygl tmtpadksat fetvtwenvt flkrffrade kypflihpvm pmkeihesir wtkdprntqd hvrslcllaw hngeeeynkf lakirsvpig ralllpeyst lyrrwldsf
| JOB-ID | P03300_134803Zt78k38AAQEAABReA7kAAAAS |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03300 |
| Description | sp|P03300|POLG_POL1M Genome polyprotein OS=Poliovirus type 1 (strain Mahoney) OX=12081 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 2209 |
| Download predictions | smoothed scores raw scores |