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>P03308_LOOPS
26-52, 62-77, 90-100, 113-145, 155-193, 200-220, 232-269, 301-337, 354-380, 413-463, 490-577, 605-623, 628-685, 695-702, 708-756, 766-775, 807-848, 856-891, 907-917, 926-938, 945-959, 978-988, 1065-1079, 1149-1171, 1198-1224, 1238-1261, 1268-1279, 1287-1350, 1360-1369, 1388-1400, 1415-1432, 1523-1636, 1644-1671, 1684-1696, 1706-1717, 1755-1774, 1780-1787, 1792-1801, 1809-1839, 1851-1870, 1881-1914, 1921-1931, 1951-1959, 1966-2004, 2027-2049, 2065-2112, 2125-2134, 2146-2164, 2186-2240, 2245-2266, 2292-2320
mnttncfial vhaireiraf flsraTGKME FTLYNGERKT FYSRPNNHDN CWlntilqlf rYVDEPFFDW VYNSPENltl aaikqleelT GLELHEGGPP alviwnikhl lqTGIGTASR PSEVCMVDGT DMCLADFHAG IFLKGqehav facvTSNGWY AIDDEDFYPW TPDPSDVLVF VPYDQEPLNG GWKanvqrkL KGAGQSSPAT GSQNQSGNTG siinnyymqq yQNSMDTQLG DNAISGGSNE GSTDTTSTHT TNTQNNDWFs klassaftgl fgalladkkt eettlledri LTTRNGHTTS TTQSSVGVTY GYSTEEDHVA GPNTSGLetr vvqaerffkk flfDWTTDKP FGHLEKLELP TDHHGVFGHL vdsyaymrng wdvevsavgn qfnggcllva mvPEWKEFDK REKYQLTLFP HQFISPRTNM TAHITVPYLG VNRYDQYKKH KPWtlvimvv spltvsntaa tqikvyaniA PTYVHVAGEL PSKEGIFPVA CSDGYGGLVT TDPKTADPVY GKVYNPPRTN YPGRFTNLLD VAEACPTFLC FDDGKPYVVT RTDDTRLlak fdvslaakhm sntylsgiaq yytqYSGTIN LHFMFTGSTD SKArymvAYI PPGVETPPET PEGAAHCIHA EWDTGLNSKF TFSIPYVSAA DYAYTASDTA ETTNVqgwvc iyqiTHGKAE GDtlvvsASA GKDFELRLPI DPRSQTTATG ESADPVTTTV ENYGGETQVQ RRHHTDvsfi mdrfvKIKSL NPTHVidlmq thqhglvgal lraatyyfsd leivvrHDGN LTWVPNGAPE AALSNTGNPT AYNKAPFTRL ALPYTAPHrv latvyNGTNK YSASGSGVRG DSGSLAPRVA RQLPASFNYG Aikaetihel lvrmkrAELY CPRPLLAiev ssqdrHKQKI IAPGKQLLnf dllkLAGDVE SNPGPFFFAd vrsnfsklvd tinqmqeDMS TKHGPDFNrl vsafeelatg vkairtglde akpwyklikl lsrlscmaav aarskdpvlv aimladtgle ildstfvvkk isdsLSSLFH VPAPVFSFGa pvllaglvkv assffrstpe dleraekqlk ardindifai lkngewlvkl ilairdwika wiaseekfVT TTDLVPGILE KQRDLNDPSK Ykeakewldn arqaclksgn vhianlcKVV APAPSKSRPE PVVVCLRGKS GQGKsflanv laqaistHFT GRTDSVWYCP PDPDHFDGYN QqtvvvmDDL GQNPDGKDFk yfaqmvSTTG FIPPMASLED KGKPFNSKVI IATTNLYSGF TPRTMVCPDA LNRRFHFDID VSAKDGYKIN nkldiikalE DTHTNPVAMf qydcallngm avemkrmQQD MFKPQPPLQN vyqlvqevie rvelHEKVSS HPIFKQISIP SQksvlyfli ekgqheaaie ffegmvhdsi keelrpliqq tsfvkrafkr lkenfeival cltllanivi miretrkrqk mvddavneyi ekANITTDDT TLDEAEKNPL ETSGASTVGF RERTLTGQRA CNDVNSEPAR PAEEQPQAEG PYTGPLERQR PLKVRAKLPQ QEGPYAGPLE RQKPLKVKAK APVVKEGPYE GPVKKPvalk vkaKNLIVTE SGAPPTDLQK MVMGNTKPVE Lildgktvai ccaTGVFGTA YLVPRHlfae kydkiMLDGR AMTDSDYrvf efeikvkgqd mlsdaalmvl hrgnrvrdit khfrDTARMK KGTPVVGVVN NADVgrlifS GEALTYKdiv vCMDGDTMPG LfaykaatKA GYCGGAVLAK DGADTFIVGT HSAGGNGVGy cscvsrsmll RMKAHVDPEP HHEGLIVDTR dveervhvmr KTKLAPTVAH GVFNPEFGPA ALSNKDPRLN EGVVldevif SKHKGDTKMS Aedkalfrrc aadyasrlhs VLGTANAPLs iyeaiKGVDG LDAMESDTAP GLPWAFQGKR RGALIDFENG TVGPeveaal klmekreykf acqtflKDEI RPMEKVRAGK TRIVDVLPVe hilytrmmig rfcaQMHSNN GPQIGSAVGC NPDVDWQRFG THFAQYRNVW DVDYSAFDAN HCsdamnimf eevfRTDFGF HPNAewilkt lvnteHAYEN KRITVEGGMP SGCSatsiin tilnniyvly alrrhYEGVE LDTYTMISYG DDIVVASDYD LDFEALKPHF KSLGQTITPA DKSDKGFVLG hsitDVTFLK RHFHIDYGTG FYKPVMaskt leailsfarr gtiqekltsv aGLAVHSGPD EYRRLFEPFQ GLFEIPSYRS lylrwvnavc gda
>P03308_HOTLOOPS
204-218, 298-319, 325-335, 431-440, 559-568, 716-756, 861-873, 1005-1013, 1148-1169, 1200-1210, 1314-1322, 1339-1348, 1416-1431, 1522-1553, 1564-1589, 1598-1639, 1644-1662, 1753-1772, 1831-1838, 1856-1872, 1882-1893, 1920-1932, 2025-2048, 2313-2322
mnttncfial vhaireiraf flsratgkme ftlyngerkt fysrpnnhdn cwlntilqlf ryvdepffdw vynspenltl aaikqleelt glelheggpp alviwnikhl lqtgigtasr psevcmvdgt dmcladfhag iflkgqehav facvtsngwy aiddedfypw tpdpsdvlvf vpydqeplng gwkanvqrkl kgaGQSSPAT GSQNQSGNtg siinnyymqq yqnsmdtqlg dnaisggsne gstdttstht tntqnndwfs klassaftgl fgalladkkt eettlleDRI LTTRNGHTTS TTQSSVGVTy gystEEDHVA GPNTSgletr vvqaerffkk flfdwttdkp fghleklelp tdhhgvfghl vdsyaymrng wdvevsavgn qfnggcllva mvpewkefdk rekyqltlfp HQFISPRTNM tahitvpylg vnrydqykkh kpwtlvimvv spltvsntaa tqikvyania ptyvhvagel pskegifpva csdgygglvt tdpktadpvy gkvynpprtn ypgrftnlld vaeacptfLC FDDGKPYVvt rtddtrllak fdvslaakhm sntylsgiaq yytqysgtin lhfmftgstd skarymvayi ppgvetppet pegaahciha ewdtglnskf tfsipyvsaa dyaytasdta ettnvqgwvc iyqithgkae gdtlvvsasa gkdfeLRLPI DPRSQTTATG ESADPVTTTV ENYGGETQVQ RRHHTDvsfi mdrfvkiksl npthvidlmq thqhglvgal lraatyyfsd leivvrhdgn ltwvpngape aalsntgnpt aynkapftrl alpytaphrv latvyngtnk YSASGSGVRG DSGslaprva rqlpasfnyg aikaetihel lvrmkraely cprpllaiev ssqdrhkqki iapgkqllnf dllklagdve snpgpfffad vrsnfsklvd tinqmqedms tkhgpdfnrl vsafeelatg vkaiRTGLDE AKPwyklikl lsrlscmaav aarskdpvlv aimladtgle ildstfvvkk isdslsslfh vpapvfsfga pvllaglvkv assffrstpe dleraekqlk ardindifai lkngewlvkl ilairdwika wiaseekFVT TTDLVPGILE KQRDLNDPSk ykeakewldn arqaclksgn vhianlckvV APAPSKSRPE pvvvclrgks gqgksflanv laqaisthft grtdsvwycp pdpdhfdgyn qqtvvvmddl gqnpdgkdfk yfaqmvsttg fippmasled kgkpfnskvi iatTNLYSGF TPrtmvcpda lnrrfhfdID VSAKDGYKin nkldiikale dthtnpvamf qydcallngm avemkrmqqd mfkpqpplqn vyqlvqevie rvelhEKVSS HPIFKQISIP Sqksvlyfli ekgqheaaie ffegmvhdsi keelrpliqq tsfvkrafkr lkenfeival cltllanivi miretrkrqk mvddavneyi eKANITTDDT TLDEAEKNPL ETSGASTVGF RERtltgqra cndVNSEPAR PAEEQPQAEG PYTGPLERQr plkvrakLPQ QEGPYAGPLE RQKPLKVKAK APVVKEGPYE GPVKKPVALk vkaKNLIVTE SGAPPTDLQK MVmgntkpve lildgktvai ccatgvfgta ylvprhlfae kydkimldgr amtdsdyrvf efeikvkgqd mlsdaalmvl hrgnrvrdit khFRDTARMK KGTPVVGVVN NAdvgrlifs gealtykdiv vcmdgdtmpg lfaykaatka gycggavlak dgadtfivgt HSAGGNGVgy cscvsrsmll rmkahVDPEP HHEGLIVDTR DVeervhvmr kTKLAPTVAH GVFnpefgpa alsnkdprln egvvldeviF SKHKGDTKMS AEdkalfrrc aadyasrlhs vlgtanapls iyeaikgvdg ldamesdtap glpwafqgkr rgalidfeng tvgpeveaal klmekreykf acqtFLKDEI RPMEKVRAGK TRIVDVLPve hilytrmmig rfcaqmhsnn gpqigsavgc npdvdwqrfg thfaqyrnvw dvdysafdan hcsdamnimf eevfrtdfgf hpnaewilkt lvntehayen kritveggmp sgcsatsiin tilnniyvly alrrhyegve ldtytmisyg ddivvasdyd ldfealkphf kslgqtitpa dksdkgfvlg hsitdvtflk rhfhidygtg fykpvmaskt leailsfarr gtiqekltsv aglavhsgpd eyrrlfepfq glFEIPSYRS LYlrwvnavc gda
>P03308_REM465
199-216, 247-260, 725-732, 863-874, 1203-1211, 1566-1580
mnttncfial vhaireiraf flsratgkme ftlyngerkt fysrpnnhdn cwlntilqlf ryvdepffdw vynspenltl aaikqleelt glelheggpp alviwnikhl lqtgigtasr psevcmvdgt dmcladfhag iflkgqehav facvtsngwy aiddedfypw tpdpsdvlvf vpydqeplng gwkanvqrKL KGAGQSSPAT GSQNQSgntg siinnyymqq yqnsmdtqlg dnaisgGSNE GSTDTTSTHT tntqnndwfs klassaftgl fgalladkkt eettlledri lttrnghtts ttqssvgvty gysteedhva gpntsgletr vvqaerffkk flfdwttdkp fghleklelp tdhhgvfghl vdsyaymrng wdvevsavgn qfnggcllva mvpewkefdk rekyqltlfp hqfisprtnm tahitvpylg vnrydqykkh kpwtlvimvv spltvsntaa tqikvyania ptyvhvagel pskegifpva csdgygglvt tdpktadpvy gkvynpprtn ypgrftnlld vaeacptflc fddgkpyvvt rtddtrllak fdvslaakhm sntylsgiaq yytqysgtin lhfmftgstd skarymvayi ppgvetppet pegaahciha ewdtglnskf tfsipyvsaa dyaytasdta ettnvqgwvc iyqithgkae gdtlvvsasa gkdfelrlpi dprsQTTATG ESadpvtttv enyggetqvq rrhhtdvsfi mdrfvkiksl npthvidlmq thqhglvgal lraatyyfsd leivvrhdgn ltwvpngape aalsntgnpt aynkapftrl alpytaphrv latvyngtnk ysASGSGVRG DSGSlaprva rqlpasfnyg aikaetihel lvrmkraely cprpllaiev ssqdrhkqki iapgkqllnf dllklagdve snpgpfffad vrsnfsklvd tinqmqedms tkhgpdfnrl vsafeelatg vkairtglde akpwyklikl lsrlscmaav aarskdpvlv aimladtgle ildstfvvkk isdslsslfh vpapvfsfga pvllaglvkv assffrstpe dleraekqlk ardindifai lkngewlvkl ilairdwika wiaseekfvt ttdlvpgile kqrdlndpsk ykeakewldn arqaclksgn vhianlckvv apAPSKSRPE Pvvvclrgks gqgksflanv laqaisthft grtdsvwycp pdpdhfdgyn qqtvvvmddl gqnpdgkdfk yfaqmvsttg fippmasled kgkpfnskvi iattnlysgf tprtmvcpda lnrrfhfdid vsakdgykin nkldiikale dthtnpvamf qydcallngm avemkrmqqd mfkpqpplqn vyqlvqevie rvelhekvss hpifkqisip sqksvlyfli ekgqheaaie ffegmvhdsi keelrpliqq tsfvkrafkr lkenfeival cltllanivi miretrkrqk mvddavneyi ekanittddt tldeaeknpl etsgastvgf rertltgqra cndvnSEPAR PAEEQPQAEG pytgplerqr plkvraklpq qegpyagple rqkplkvkak apvvkegpye gpvkkpvalk vkaknlivte sgapptdlqk mvmgntkpve lildgktvai ccatgvfgta ylvprhlfae kydkimldgr amtdsdyrvf efeikvkgqd mlsdaalmvl hrgnrvrdit khfrdtarmk kgtpvvgvvn nadvgrlifs gealtykdiv vcmdgdtmpg lfaykaatka gycggavlak dgadtfivgt hsaggngvgy cscvsrsmll rmkahvdpep hheglivdtr dveervhvmr ktklaptvah gvfnpefgpa alsnkdprln egvvldevif skhkgdtkms aedkalfrrc aadyasrlhs vlgtanapls iyeaikgvdg ldamesdtap glpwafqgkr rgalidfeng tvgpeveaal klmekreykf acqtflkdei rpmekvragk trivdvlpve hilytrmmig rfcaqmhsnn gpqigsavgc npdvdwqrfg thfaqyrnvw dvdysafdan hcsdamnimf eevfrtdfgf hpnaewilkt lvntehayen kritveggmp sgcsatsiin tilnniyvly alrrhyegve ldtytmisyg ddivvasdyd ldfealkphf kslgqtitpa dksdkgfvlg hsitdvtflk rhfhidygtg fykpvmaskt leailsfarr gtiqekltsv aglavhsgpd eyrrlfepfq glfeipsyrs lylrwvnavc gda
| JOB-ID | P03308_055955Z7q5W38AAQEAAFgZeYgAAABB |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03308 |
| Description | sp|P03308|POLG_FMDVA Genome polyprotein OS=Foot-and-mouth disease virus (isolate Bovine/United Kingdom/A12Valle119/1932 serotype A) OX=12114 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 2333 |
| Download predictions | smoothed scores raw scores |