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>P03315_LOOPS
1-37, 56-91, 96-109, 121-154, 162-227, 237-244, 255-269, 280-298, 307-315, 326-335, 340-364, 386-403, 416-445, 460-491, 500-639, 649-687, 727-754, 814-843, 852-935, 964-992, 997-1026, 1034-1055, 1062-1112, 1119-1130, 1136-1149, 1170-1177, 1187-1219
MNYIPTQTFY GRRWRPRPAA RPWPLQATPV APVVPDFqaq qmqqlisavn altmrQNAIA PARPPKPKKK KTTKPKPKTQ PKKINGKTQQ QkkkdKQADK KKKKPGKREr mcmkiendci FEVKHEGKVT GYACLVGDKV MKPAHVKGVI DNADlaklaf kKSSKYDLEC AQIPVHMRSD ASKYTHEKPE GHYNWHHGAV QYSGGRFTIP TGAGKPGDSG RPIFDNKgrv vaivlgGANE GSRTalsvvt wnkdMVTRVT PEGSEEWSAp litamcvlaN ATFPCFQPPC VPCCYENNae atlrmlEDNV DRPGYydllq aaltcRNGTR HRRSVsqhfN VYKATRPYIA YCADCGAGHS CHSPvaieav rseatdgmlk iqfsaQIGID KSDNHDYTKI RYAdghaien avrssLKVAT SGDCFVHGTM GHFILAKCPP GEFLQvsiqd trnavracrI QYHHDPQPVG REKFTIRPHY GKEIPCTTYQ QttaetveeI DMHMPPDTPD RTLLSQQSGN VKITVGGKKV KYNCTCGTGN VGTTNSDMTI NTCLIEQCHV SVTDHKKWQF NSPFVPRADE PARKGKVHIP FPLDNITCRV PMAREPTVIH GKREVTLHLH PDHPTLFSYR TLGEDPQYHe ewvtaaveRT IPVPVDGMEY HWGNNDPVRL WSQLTTEGKP HGWPHQIvqy yyglypaatv savvgmslla lisifascym lvaarsKCLT PYALTPGAAV PWTLGILCCA PRAHaasvae tmaylwdqnq alfwlefaap vaciliityc lrnvlcccks lsflvllslg ataRAYEHST VMPNVVGFPY KAHIERPGYS PLTlqmqvve tSLEPTLNLE YITCEYKTVV PSPYVKCCGA SECSTKEKPD YQCKVYTGVY PFMWGGAYCF CDSENTQLSE AYVDRSDVCR HDHASaykah taslkakvrv mygnvnqtvd vyvNGDHAVT IGGTQFIFGP LSSAWTPFDN KIvvykDEVF NQDFPPYGSG QPGRFGDIQS RTVESNdlya ntaLKLARPS PGMVHVPYTQ TPSGFkywlk eKGTALNTKA PFGCQIKTNP VRAMNCAVGN IPVSMNLPDS AFTRIVEAPT IIdltctvAT CTHSSDFGGV ltltyKTNKN GDCSVHSHSn vatlqeatak vktagkvtlH FSTASASpsf vvslcsARAT CSASCEPPKD HIVPYAASHS NVVFPDMSGt alswvqkisg glgafaigai lvlvvvtcig lrr
>P03315_HOTLOOPS
1-23, 58-113, 236-253, 326-342, 385-394, 461-473, 480-490, 523-534, 539-548, 576-600, 880-893, 1035-1044
MNYIPTQTFY GRRWRPRPAA RPWplqatpv apvvpdfqaq qmqqlisavn altmrqnAIA PARPPKPKKK KTTKPKPKTQ PKKINGKTQQ QKKKDKQADK KKKKPGKRER MCMkiendci fevkhegkvt gyaclvgdkv mkpahvkgvi dnadlaklaf kksskydlec aqipvhmrsd askythekpe ghynwhhgav qysggrftip tgagkpgdsg rpifdnkgrv vaivlGGANE GSRTALSVVT WNKdmvtrvt pegseewsap litamcvlan atfpcfqppc vpccyennae atlrmlednv drpgyydllq aaltcRNGTR HRRSVSQHFN VYkatrpyia ycadcgaghs chspvaieav rseatdgmlk iqfsAQIGID KSDNhdytki ryadghaien avrsslkvat sgdcfvhgtm ghfilakcpp geflqvsiqd trnavracri QYHHDPQPVG REKftirphY GKEIPCTTYQ qttaetveei dmhmppdtpd rtllsqqsgn vkITVGGKKV KYNCtcgtGN VGTTNSDMti ntclieqchv svtdhkkwqf nspfvPRADE PARKGKVHIP FPLDNITCRV pmareptvih gkrevtlhlh pdhptlfsyr tlgedpqyhe ewvtaavert ipvpvdgmey hwgnndpvrl wsqlttegkp hgwphqivqy yyglypaatv savvgmslla lisifascym lvaarskclt pyaltpgaav pwtlgilcca prahaasvae tmaylwdqnq alfwlefaap vaciliityc lrnvlcccks lsflvllslg atarayehst vmpnvvgfpy kahierpgys pltlqmqvve tsleptlnle yitceyktvv pspyvkccgA SECSTKEKPD YQCkvytgvy pfmwggaycf cdsentqlse ayvdrsdvcr hdhasaykah taslkakvrv mygnvnqtvd vyvngdhavt iggtqfifgp lssawtpfdn kivvykdevf nqdfppygsg qpgrfgdiqs rtvesndlya ntalKLARPS PGMVhvpytq tpsgfkywlk ekgtalntka pfgcqiktnp vramncavgn ipvsmnlpds aftriveapt iidltctvat cthssdfggv ltltyktnkn gdcsvhshsn vatlqeatak vktagkvtlh fstasaspsf vvslcsarat csasceppkd hivpyaashs nvvfpdmsgt alswvqkisg glgafaigai lvlvvvtcig lrr
>P03315_REM465
61-108
mnyiptqtfy grrwrprpaa rpwplqatpv apvvpdfqaq qmqqlisavn altmrqnaia PARPPKPKKK KTTKPKPKTQ PKKINGKTQQ QKKKDKQADK KKKKPGKRer mcmkiendci fevkhegkvt gyaclvgdkv mkpahvkgvi dnadlaklaf kksskydlec aqipvhmrsd askythekpe ghynwhhgav qysggrftip tgagkpgdsg rpifdnkgrv vaivlggane gsrtalsvvt wnkdmvtrvt pegseewsap litamcvlan atfpcfqppc vpccyennae atlrmlednv drpgyydllq aaltcrngtr hrrsvsqhfn vykatrpyia ycadcgaghs chspvaieav rseatdgmlk iqfsaqigid ksdnhdytki ryadghaien avrsslkvat sgdcfvhgtm ghfilakcpp geflqvsiqd trnavracri qyhhdpqpvg rekftirphy gkeipcttyq qttaetveei dmhmppdtpd rtllsqqsgn vkitvggkkv kynctcgtgn vgttnsdmti ntclieqchv svtdhkkwqf nspfvprade parkgkvhip fpldnitcrv pmareptvih gkrevtlhlh pdhptlfsyr tlgedpqyhe ewvtaavert ipvpvdgmey hwgnndpvrl wsqlttegkp hgwphqivqy yyglypaatv savvgmslla lisifascym lvaarskclt pyaltpgaav pwtlgilcca prahaasvae tmaylwdqnq alfwlefaap vaciliityc lrnvlcccks lsflvllslg atarayehst vmpnvvgfpy kahierpgys pltlqmqvve tsleptlnle yitceyktvv pspyvkccga secstkekpd yqckvytgvy pfmwggaycf cdsentqlse ayvdrsdvcr hdhasaykah taslkakvrv mygnvnqtvd vyvngdhavt iggtqfifgp lssawtpfdn kivvykdevf nqdfppygsg qpgrfgdiqs rtvesndlya ntalklarps pgmvhvpytq tpsgfkywlk ekgtalntka pfgcqiktnp vramncavgn ipvsmnlpds aftriveapt iidltctvat cthssdfggv ltltyktnkn gdcsvhshsn vatlqeatak vktagkvtlh fstasaspsf vvslcsarat csasceppkd hivpyaashs nvvfpdmsgt alswvqkisg glgafaigai lvlvvvtcig lrr
| JOB-ID | P03315_071804ZuktK38AAQEAADCSJlAAAAAO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03315 |
| Description | sp|P03315|POLS_SFV Structural polyprotein OS=Semliki forest virus OX=11033 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1253 |
| Download predictions | smoothed scores raw scores |