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>P03362_LOOPS
1-20, 32-43, 55-63, 70-79, 91-147, 157-166, 212-238, 253-264, 285-300, 317-326, 332-473, 482-534, 540-549, 560-600, 616-672, 683-727, 741-751, 757-766, 780-796, 802-824, 837-849, 857-871, 915-937, 965-998, 1009-1045, 1053-1069, 1110-1122, 1140-1150, 1161-1191, 1200-1239, 1278-1294, 1306-1325, 1336-1347, 1368-1409, 1422-1462
MGQIFSRSAS PIPRPPRGLA ahhwlnflqa aYRLEPGPSS YDFhqlkkfl kialETPARI CPInysllaS LLPKGYPGRv neilhiliqt QAQIPSRPAP PPPSSPTHDP PDSDPQIPPP YVEPTAPQVL PVMHPHGAPP NHRPWQMkdl qaikqeVSQA APGSPQfmqt irlavqqfdp takdlqdllq ylcsslvasl hhqqldslis eAETRGITGY NPLAGPLRVQ ANNPQQQGlr reyqqlwlaa faALPGSAKD PSWAsilqgl eepyhafver lniaLDNGLP EGTPKDPILR slaysnanke cqkllqARGH TNSPLGdmlr aCQTWTPKDK TKVLVVQPKK PPPNQPCFRC GKAGHWSRDC TQPRPPPGPC PLCQDPTHWK RDCPRLKPTI PEPEPEEDAL LLDLPADIPH PKNLHRGGGL TSPPTLQQVL PNQDPASILP VIPLDPARRP VIKAQVDTQT SHPktieall dTGADMTVLP IALFSSNTPL KNTSVLGAGG QTQDHFKLTS LPVLIRLPFR TTPIvltscL VDTKNNWAIi grdalqqcqG VLYLPEAKRP PVILPIQAPA VLGLEHLPRP PQISQFPLNP erlqalqhlv rkaleAGHIE PYTGPGNNPV FPVKKANGTW RFIHDLRATN SLTIDLSSSS PGPPDLSSLP TTlahlqtid lrDAFFQIPL PKQFQPYFAF TVPQQCNYGP GTRYAWKVLP QGFKNSPtlf emqlahilqp IRQAFPQCTI LqymddILLA SPSHEDllll seatmasliS HGLPVSENKT QQTPGTikfl gQIISPNHLT YDAVPTVPIR SRWAlpelqa llgeiqWVSK GTPTLRQPLh slycalQRHT DPRDQIYLNP Sqvqslvqlr qalsqncrsr lvqtlpllga imltltgttt vvfqSKEQWP LVWLHAPLPH TSQCPWGqll asavllldky tlqsygllcq tihhNISTQT FNQFIQTSDH PSVPILLHHS HRFKNLGAqt gelwntflKT AAPLAPVKAL MPVFTLSPVI INTAPCLFSD GSTSRaayil wdKQILSQRS FPLPPPHKSa qraellgllh glssarswrc lnifldskyl yhylrtlalG TFQGRSSQAP FQallprlls rkvvylhhvR SHTNLPDPIS rlnaltdall ITPVLQLSPA ELHSFTHCGQ TALTLQGATT TeasnilrsC HACRGGNPQH QMPRGHIRRG LLPNHIWQGD ITHFKYKNTl yrlhvwvdtf sgaisatqkr ketsseaiss llqaiahLGK PSYINTDNGP AYISqdflnm ctslaIRHTT HVPYNPTSSG LVERSngilk tllykYFTDK PDLPMDNals ialwtinhln vltnchkTRW QLHHSPRLQP IPETRSLSNK QTHWYYFKLP GLNSRQWKGp qealqeaaga aLIPVSASSA QWIPWRLLKR AACPRPVGGP ADPKEKDLQH HG
>P03362_HOTLOOPS
1-15, 220-229, 317-324, 344-356, 464-473, 620-630, 1141-1150, 1311-1325, 1374-1390, 1444-1462
MGQIFSRSAS PIPRPprgla ahhwlnflqa ayrlepgpss ydfhqlkkfl kialetpari cpinysllas llpkgypgrv neilhiliqt qaqipsrpap pppsspthdp pdsdpqippp yveptapqvl pvmhphgapp nhrpwqmkdl qaikqevsqa apgspqfmqt irlavqqfdp takdlqdllq ylcsslvasl hhqqldslis eaetrgitgY NPLAGPLRVq annpqqqglr reyqqlwlaa faalpgsakd pswasilqgl eepyhafver lnialdnglp egtpkdpilr slaysnanke cqkllqARGH TNSPlgdmlr acqtwtpkdk tkvLVVQPKK PPPNQPcfrc gkaghwsrdc tqprpppgpc plcqdpthwk rdcprlkpti pepepeedal lldlpadiph pknlhrgggl tspptlqqvl pnqdpasilp vipldparrp vikAQVDTQT SHPktieall dtgadmtvlp ialfssntpl kntsvlgagg qtqdhfklts lpvlirlpfr ttpivltscl vdtknnwaii grdalqqcqg vlylpeakrp pvilpiqapa vlglehlprp pqisqfplnp erlqalqhlv rkaleaghiE PYTGPGNNPV fpvkkangtw rfihdlratn sltidlssss pgppdlsslp ttlahlqtid lrdaffqipl pkqfqpyfaf tvpqqcnygp gtryawkvlp qgfknsptlf emqlahilqp irqafpqcti lqymddilla spshedllll seatmaslis hglpvsenkt qqtpgtikfl gqiispnhlt ydavptvpir srwalpelqa llgeiqwvsk gtptlrqplh slycalqrht dprdqiylnp sqvqslvqlr qalsqncrsr lvqtlpllga imltltgttt vvfqskeqwp lvwlhaplph tsqcpwgqll asavllldky tlqsygllcq tihhnistqt fnqfiqtsdh psvpillhhs hrfknlgaqt gelwntflkt aaplapvkal mpvftlspvi intapclfsd gstsraayil wdkqilsqrs fplppphksa qraellgllh glssarswrc lnifldskyl yhylrtlalg tfqgrssqap fqallprlls rkvvylhhvr SHTNLPDPIS rlnaltdall itpvlqlspa elhsfthcgq taltlqgatt teasnilrsc hacrggnpqh qmprghirrg llpnhiwqgd ithfkykntl yrlhvwvdtf sgaisatqkr ketsseaiss llqaiahlgk psyintdngp ayisqdflnm ctslairhtt HVPYNPTSSG LVERSngilk tllykyftdk pdlpmdnals ialwtinhln vltnchktrw qlhHSPRLQP IPETRSLSNK qthwyyfklp glnsrqwkgp qealqeaaga alipvsassa qwipwrllkr aacPRPVGGP ADPKEKDLQH HG
>P03362_REM465
93-114, 156-164, 656-666, 1255-1267, 1408-1418, 1447-1462
mgqifsrsas piprpprgla ahhwlnflqa ayrlepgpss ydfhqlkkfl kialetpari cpinysllas llpkgypgrv neilhiliqt qaQIPSRPAP PPPSSPTHDP PDSDpqippp yveptapqvl pvmhphgapp nhrpwqmkdl qaikqEVSQA APGSpqfmqt irlavqqfdp takdlqdllq ylcsslvasl hhqqldslis eaetrgitgy nplagplrvq annpqqqglr reyqqlwlaa faalpgsakd pswasilqgl eepyhafver lnialdnglp egtpkdpilr slaysnanke cqkllqargh tnsplgdmlr acqtwtpkdk tkvlvvqpkk pppnqpcfrc gkaghwsrdc tqprpppgpc plcqdpthwk rdcprlkpti pepepeedal lldlpadiph pknlhrgggl tspptlqqvl pnqdpasilp vipldparrp vikaqvdtqt shpktieall dtgadmtvlp ialfssntpl kntsvlgagg qtqdhfklts lpvlirlpfr ttpivltscl vdtknnwaii grdalqqcqg vlylpeakrp pvilpiqapa vlglehlprp pqisqfplnp erlqalqhlv rkaleaghie pytgpgnnpv fpvkkangtw rfihdlratn sltidLSSSS PGPPDLsslp ttlahlqtid lrdaffqipl pkqfqpyfaf tvpqqcnygp gtryawkvlp qgfknsptlf emqlahilqp irqafpqcti lqymddilla spshedllll seatmaslis hglpvsenkt qqtpgtikfl gqiispnhlt ydavptvpir srwalpelqa llgeiqwvsk gtptlrqplh slycalqrht dprdqiylnp sqvqslvqlr qalsqncrsr lvqtlpllga imltltgttt vvfqskeqwp lvwlhaplph tsqcpwgqll asavllldky tlqsygllcq tihhnistqt fnqfiqtsdh psvpillhhs hrfknlgaqt gelwntflkt aaplapvkal mpvftlspvi intapclfsd gstsraayil wdkqilsqrs fplppphksa qraellgllh glssarswrc lnifldskyl yhylrtlalg tfqgrssqap fqallprlls rkvvylhhvr shtnlpdpis rlnaltdall itpvlqlspa elhsfthcgq taltlqgatt teasnilrsc hacrggnpqh qmprghirrg llpnhiwqgd ithfkykntl yrlhvwvdtf sgaiSATQKR KETSSEAiss llqaiahlgk psyintdngp ayisqdflnm ctslairhtt hvpynptssg lversngilk tllykyftdk pdlpmdnals ialwtinhln vltnchktrw qlhhsprlqp ipetrslsnk qthwyyfklp glnsrqwKGP QEALQEAAga alipvsassa qwipwrllkr aacprpVGGP ADPKEKDLQH HG
| JOB-ID | P03362_232609Zvc-EX8AAQEAAALBec0AAAAK |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03362 |
| Description | sp|P03362|POL_HTL1A Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) OX=11926 GN=gag-pro-pol PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 1462 |
| Download predictions | smoothed scores raw scores |