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>P04580_LOOPS
1-13, 43-84, 113-148, 177-270, 293-335, 353-410, 429-447, 453-477, 486-500, 589-617, 707-743
MRAREIERNC PNLwkwgiml lgilmicsaa dnlwvtvyyg vpVWKEATTT LFCASDAKSY KTEAHNIWAT HACVPTDPNP QEIElenvte nfnmwrnnmv eqihediisl wdQSLKPCVK LTPLCVTLNC TDESDEWMGN VTGKNVTEdi rmkncsfnit tvvrdktkqv halfyrLDIV PIDNDNSTNS TNYRLINCNT SAITQACPKV SFEPIPIHYC APAGFAILKC RDKRFNGTGP CTNVSTVQCT HGIRPVVSTQ LLLNGSLAEE eiiirsenlt nnakiiivql neSVAINCTR PYKNTRQSTP IGLGQALYTT RGRTKIIGQA HCNISkedwn ktlqrvaikl gnLLNKTTII FKPSSGGDAE ITTHSFNCGG EFFYCNTSGL FNSTWNINNS EGANSTESDN klitlqcrik qiinmwqgVG KAMYAPPIEG QINCSSNitg llLTRDGGTN NSSNETFRPG GGDMRDNwrs elykyKVVKI EPLGVAPTKA krrvverekr aiglgamflg flgaagstmg aasvtltvqa rqlmsgivqq qnnllraiea qqhllqltvw gikqlqaril averylkdQQ LLGIWGCSGK LICTTTVPWN SSWSNRSlnd iwqnmtwmew ereidnytgl iyrlieesqt qqekneqell eldkwaslwn wfnitqwlwy ikifimivgg liglrivfav lslvnrVRQG YSPLSFQTLL PAPREPDRPE GIEEEGGERG RDRsirlvng fsaliwddlr nlclfsyhrl rdliliaari vellgrrgwe alkylwnllq ywsrelrnsa sslldtiaia vaegtdrvie ivrrtyravl nvptrirqgl erlll
>P04580_HOTLOOPS
1-13, 130-151, 158-168, 177-187, 245-255, 274-282, 300-313, 454-476, 486-504, 606-616, 710-745, 836-855
MRAREIERNC PNLwkwgiml lgilmicsaa dnlwvtvyyg vpvwkeattt lfcasdaksy kteahniwat hacvptdpnp qeielenvte nfnmwrnnmv eqihediisl wdqslkpcvk ltplcvtlnC TDESDEWMGN VTGKNVTEDI RmkncsfNIT TVVRDKTKqv halfyrLDIV PIDNDNStns tnyrlincnt saitqacpkv sfepipihyc apagfailkc rdkrfngtgp ctnvSTVQCT HGIRPvvstq lllngslaee eiiIRSENLT NNakiiivql nesvainctR PYKNTRQSTP IGLgqalytt rgrtkiigqa hcniskedwn ktlqrvaikl gnllnkttii fkpssggdae itthsfncgg effycntsgl fnstwninns eganstesdn klitlqcrik qiinmwqgvg kamyappieg qincssnitg lllTRDGGTN NSSNETFRPG GGDMRDnwrs elykyKVVKI EPLGVAPTKA KRRVverekr aiglgamflg flgaagstmg aasvtltvqa rqlmsgivqq qnnllraiea qqhllqltvw gikqlqaril averylkdqq llgiwgcsgk licttTVPWN SSWSNRslnd iwqnmtwmew ereidnytgl iyrlieesqt qqekneqell eldkwaslwn wfnitqwlwy ikifimivgg liglrivfav lslvnrvrqG YSPLSFQTLL PAPREPDRPE GIEEEGGERG RDRSIrlvng fsaliwddlr nlclfsyhrl rdliliaari vellgrrgwe alkylwnllq ywsrelrnsa sslldtiaia vaegtdrvie ivrrtYRAVL NVPTRIRQGL ERLLL
>P04580_REM465
1-8, 649-656, 725-739
MRAREIERnc pnlwkwgiml lgilmicsaa dnlwvtvyyg vpvwkeattt lfcasdaksy kteahniwat hacvptdpnp qeielenvte nfnmwrnnmv eqihediisl wdqslkpcvk ltplcvtlnc tdesdewmgn vtgknvtedi rmkncsfnit tvvrdktkqv halfyrldiv pidndnstns tnyrlincnt saitqacpkv sfepipihyc apagfailkc rdkrfngtgp ctnvstvqct hgirpvvstq lllngslaee eiiirsenlt nnakiiivql nesvainctr pykntrqstp iglgqalytt rgrtkiigqa hcniskedwn ktlqrvaikl gnllnkttii fkpssggdae itthsfncgg effycntsgl fnstwninns eganstesdn klitlqcrik qiinmwqgvg kamyappieg qincssnitg llltrdggtn nssnetfrpg ggdmrdnwrs elykykvvki eplgvaptka krrvverekr aiglgamflg flgaagstmg aasvtltvqa rqlmsgivqq qnnllraiea qqhllqltvw gikqlqaril averylkdqq llgiwgcsgk lictttvpwn sswsnrslnd iwqnmtwmew ereidnytgl iyrlieesQT QQEKNEqell eldkwaslwn wfnitqwlwy ikifimivgg liglrivfav lslvnrvrqg ysplsfqtll paprEPDRPE GIEEEGGERg rdrsirlvng fsaliwddlr nlclfsyhrl rdliliaari vellgrrgwe alkylwnllq ywsrelrnsa sslldtiaia vaegtdrvie ivrrtyravl nvptrirqgl erlll
| JOB-ID | P04580_111134Zt7X5X8AAQEAABRfHPwAAABL |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P04580 |
| Description | sp|P04580|ENV_HV1Z6 Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 group M subtype D (isolate Z6) OX=11708 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 855 |
| Download predictions | smoothed scores raw scores |