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>P04601_LOOPS
1-14, 22-30, 37-47, 61-80, 93-102, 117-178, 199-206
MGGKWSKSSV IGWPtvrerm rRAEPAADRV gaasrdLEKH GAITSSNtaa tnaacawlea QEEEEVGFPV TPQVPLRPMT ykaavdlshf lkEKGGLEGL IHsqrrqdil dlwiyhTQGY FPDWQNYTPG PGVRYPLTFG WCYKLVPVEP DKIEEANKGE NTSLLHPVSL HGMDDPERev lewrfdsrla fhhvarelHP EYFKNC
>P04601_HOTLOOPS
1-49, 196-206
MGGKWSKSSV IGWPTVRERM RRAEPAADRV GAASRDLEKH GAITSSNTAa tnaacawlea qeeeevgfpv tpqvplrpmt ykaavdlshf lkekgglegl ihsqrrqdil dlwiyhtqgy fpdwqnytpg pgvrypltfg wcyklvpvep dkieeankge ntsllhpvsl hgmddperev lewrfdsrla fhhvaRELHP EYFKNC
>P04601_REM465
1-8, 20-36
MGGKWSKSsv igwptvrerM RRAEPAADRV GAASRDlekh gaitssntaa tnaacawlea qeeeevgfpv tpqvplrpmt ykaavdlshf lkekgglegl ihsqrrqdil dlwiyhtqgy fpdwqnytpg pgvrypltfg wcyklvpvep dkieeankge ntsllhpvsl hgmddperev lewrfdsrla fhhvarelhp eyfknc
| JOB-ID | P04601_050219ZukNW38AAQEAADCSHSYAAAAU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P04601 |
| Description | sp|P04601|NEF_HV1H2 Protein Nef OS=Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) OX=11706 GN=nef PE=1 SV=5 |
| Title/ID | none |
| Sequence length | 206 |
| Download predictions | smoothed scores raw scores |