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>P05877_LOOPS
42-83, 113-164, 188-198, 203-285, 297-326, 364-415, 431-479, 491-503, 526-533, 590-618, 710-749
mrvkgirrny qhwwgwgtml lgllmicsat eklwvtvyyg vPVWKEATTT LFCASDAKAY DTEVHNVWAT QACVPTDPNP QEVelvnvte nfnmwknnmv eqmhediisl wdQSLKPCVK LTPLCVTLNC TDLRNTTNTN NSTANNNSNS EGTIKGGEMK NCSFnittsi rdkmqkeyal lykldivSID NDSTSYRLis cnTSVITQAC PKISFEPIPI HYCAPAGFAI LKCNDKKFSG KGSCKNVSTV QCTHGIRPVV STQLLLNGSL AEEEVVIRSE NFTDNaktii vhlnesVQIN CTRPNYNKRK RIHIGPGRAF YTTKNIigti rqahcnisra kwndtlrqiv sklkeqfknk tivFNQSSGG DPEIVMHSFN CGGEFFYCNT SPLFNSTWNG NNTWNNTTGS NNNITlqcki kqiinmwqev GKAMYAPPIE GQIRCSSNIT GLLLTRDGGK DTDTNDTEIF RPGGGDMRDn wrselykykv VTIEPLGVAP TKAkrrvvqr ekraaigalf lgflgAAGST MGAasvtltv qarlllsgiv qqqnnllrai eaqqhmlqlt vwgikqlqar vlaverylkD QQLLGFWGCS GKLICTTTVP WNASWSNKsl ddiwnnmtwm qwereidnyt sliyslleks qtqqekneqe lleldkwasl wnwfditnwl wyikifimiv gglvglrivf avlsivnrvR QGYSPLSLQT RPPVPRGPDR PEGIEEEGGE RDRDTSGRLv hgflaiiwvd lrslflfsyh hrdllliaar ivellgrrgw evlkywwnll qywsqelkss avsllnatai avaegtdrvi evlqragrai lhiptrirqg lerall
>P05877_HOTLOOPS
1-14, 72-81, 134-160, 249-266, 293-320, 354-372, 454-481, 491-508, 711-748, 837-856
MRVKGIRRNY QHWWgwgtml lgllmicsat eklwvtvyyg vpvwkeattt lfcasdakay dtevhnvwat qACVPTDPNP Qevelvnvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtlnc tdlRNTTNTN NSTANNNSNS EGTIKGGEMK ncsfnittsi rdkmqkeyal lykldivsid ndstsyrlis cntsvitqac pkisfepipi hycapagfai lkcndkkfsg kgscknvsTV QCTHGIRPVV STQLLLngsl aeeevvirse nftdnaktii vhLNESVQIN CTRPNYNKRK RIHIGPGRAF yttkniigti rqahcnisra kwndtlrqiv sklKEQFKNK TIVFNQSSGG DPeivmhsfn cggeffycnt splfnstwng nntwnnttgs nnnitlqcki kqiinmwqev gkamyappie gqircssnit gllLTRDGGK DTDTNDTEIF RPGGGDMRDN Wrselykykv VTIEPLGVAP TKAKRRVVqr ekraaigalf lgflgaagst mgaasvtltv qarlllsgiv qqqnnllrai eaqqhmlqlt vwgikqlqar vlaverylkd qqllgfwgcs gklictttvp wnaswsnksl ddiwnnmtwm qwereidnyt sliyslleks qtqqekneqe lleldkwasl wnwfditnwl wyikifimiv gglvglrivf avlsivnrvr QGYSPLSLQT RPPVPRGPDR PEGIEEEGGE RDRDTSGRlv hgflaiiwvd lrslflfsyh hrdllliaar ivellgrrgw evlkywwnll qywsqelkss avsllnatai avaegtdrvi evlqraGRAI LHIPTRIRQG LERALL
>P05877_REM465
500-508, 649-658, 721-744
mrvkgirrny qhwwgwgtml lgllmicsat eklwvtvyyg vpvwkeattt lfcasdakay dtevhnvwat qacvptdpnp qevelvnvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtlnc tdlrnttntn nstannnsns egtikggemk ncsfnittsi rdkmqkeyal lykldivsid ndstsyrlis cntsvitqac pkisfepipi hycapagfai lkcndkkfsg kgscknvstv qcthgirpvv stqlllngsl aeeevvirse nftdnaktii vhlnesvqin ctrpnynkrk rihigpgraf yttkniigti rqahcnisra kwndtlrqiv sklkeqfknk tivfnqssgg dpeivmhsfn cggeffycnt splfnstwng nntwnnttgs nnnitlqcki kqiinmwqev gkamyappie gqircssnit gllltrdggk dtdtndteif rpgggdmrdn wrselykykv vtieplgvaP TKAKRRVVqr ekraaigalf lgflgaagst mgaasvtltv qarlllsgiv qqqnnllrai eaqqhmlqlt vwgikqlqar vlaverylkd qqllgfwgcs gklictttvp wnaswsnksl ddiwnnmtwm qwereidnyt sliyslleKS QTQQEKNEqe lleldkwasl wnwfditnwl wyikifimiv gglvglrivf avlsivnrvr qgysplslqt RPPVPRGPDR PEGIEEEGGE RDRDtsgrlv hgflaiiwvd lrslflfsyh hrdllliaar ivellgrrgw evlkywwnll qywsqelkss avsllnatai avaegtdrvi evlqragrai lhiptrirqg lerall
| JOB-ID | P05877_112854Zt7b9n8AAQEAABReAIMAAAAU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P05877 |
| Description | sp|P05877|ENV_HV1MN Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 group M subtype B (isolate MN) OX=11696 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 856 |
| Download predictions | smoothed scores raw scores |