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>P05878_LOOPS
1-11, 42-63, 69-83, 113-163, 181-217, 228-266, 273-280, 294-321, 359-410, 425-442, 447-477, 486-501, 525-534, 591-617, 708-749
MRVKGSGRNY Qhlwrwgtml lgilmicsaa eqlwvtvyyg vPVWKEATTT LFCASDAKAY DTEvhniwAT HACVPTDPNP QEVvlgnvte nfnmwknnmv eqmhediisl wdQSLKPCVK LTPLCVTLNC TNLRNDTSTN ATNTTSSNRG KMEGGEMTNC SFNittsirs kvqkeyalfy KLDVVPIDNT SYTLINCNTS VITQACPKVS FEPIPIHyca rwfailnCNN KKFNGTGPCT NVSTVQCTHG IRPVVSTHLL LNGSLAeeev vlRSENFTDN aktiivqlke aveINCTRPN NNTTRSIHIG PGRAFYATGD Iigdirqahc nisrakwnnt lkqiviklrd qfenktiiFN RSSGGDPEIV MHSFNCGGEF FYCNSTQLFS STWNGTEGSN NTGGNDTITL pcrikeiinm wqevGKAMYA PPIKGQVKCS SNitglLLTR DGGNSKNGSK NENTEIFRPG GGDMRDNwrs elykyKVVKI EPLGVAPTKA Krrvvqrekr avgtigamfl gflgAAGSTM GATSmtltvq arlllsgivq qqnnllraie aqqhllqltv wgikqlqarv laverylrdq QLLGIWGCSG KLICTTTVPW NTSWSNKsld kiwgnmtwme wereidnyts liytlieesq nqqekneqel leldkwaslw nwfnitnwlw yikifimivg glvglrivft vlsivnrVRQ GYSPLSFQTR LPSQRGPDRP EGIEEEGGER DRDRSGRLVd gflaiiwvdr slclfsyhrl rdlllivtri vellgrrgwe alkywwnllq ywsqelrnsa vsfvnataia vaegtdrvie llqrafrail hiptrirqgl eralq
>P05878_HOTLOOPS
1-12, 72-80, 130-157, 291-311, 359-368, 450-476, 487-505, 606-617, 710-748, 838-846
MRVKGSGRNY QHlwrwgtml lgilmicsaa eqlwvtvyyg vpvwkeattt lfcasdakay dtevhniwat hACVPTDPNP qevvlgnvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtlnC TNLRNDTSTN ATNTTSSNRG KMEGGEMtnc sfnittsirs kvqkeyalfy kldvvpidnt sytlincnts vitqacpkvs fepipihyca rwfailncnn kkfngtgpct nvstvqcthg irpvvsthll lngslaeeev vlrsenftdn aktiivqlke AVEINCTRPN NNTTRSIHIG Pgrafyatgd iigdirqahc nisrakwnnt lkqiviklrd qfenktiiFN RSSGGDPEiv mhsfncggef fycnstqlfs stwngtegsn ntggndtitl pcrikeiinm wqevgkamya ppikgqvkcs snitgllltR DGGNSKNGSK NENTEIFRPG GGDMRDnwrs elykykVVKI EPLGVAPTKA KRRVVqrekr avgtigamfl gflgaagstm gatsmtltvq arlllsgivq qqnnllraie aqqhllqltv wgikqlqarv laverylrdq qllgiwgcsg klictTTVPW NTSWSNKsld kiwgnmtwme wereidnyts liytlieesq nqqekneqel leldkwaslw nwfnitnwlw yikifimivg glvglrivft vlsivnrvrQ GYSPLSFQTR LPSQRGPDRP EGIEEEGGER DRDRSGRLvd gflaiiwvdr slclfsyhrl rdlllivtri vellgrrgwe alkywwnllq ywsqelrnsa vsfvnataia vaegtdrvie llqrafrAIL HIPTRIrqgl eralq
>P05878_REM465
1-8, 498-508, 650-657, 720-743
MRVKGSGRny qhlwrwgtml lgilmicsaa eqlwvtvyyg vpvwkeattt lfcasdakay dtevhniwat hacvptdpnp qevvlgnvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtlnc tnlrndtstn atnttssnrg kmeggemtnc sfnittsirs kvqkeyalfy kldvvpidnt sytlincnts vitqacpkvs fepipihyca rwfailncnn kkfngtgpct nvstvqcthg irpvvsthll lngslaeeev vlrsenftdn aktiivqlke aveinctrpn nnttrsihig pgrafyatgd iigdirqahc nisrakwnnt lkqiviklrd qfenktiifn rssggdpeiv mhsfncggef fycnstqlfs stwngtegsn ntggndtitl pcrikeiinm wqevgkamya ppikgqvkcs snitgllltr dggnskngsk nenteifrpg ggdmrdnwrs elykykvvki eplgvapTKA KRRVVQREkr avgtigamfl gflgaagstm gatsmtltvq arlllsgivq qqnnllraie aqqhllqltv wgikqlqarv laverylrdq qllgiwgcsg klictttvpw ntswsnksld kiwgnmtwme wereidnyts liytlieesQ NQQEKNEqel leldkwaslw nwfnitnwlw yikifimivg glvglrivft vlsivnrvrq gysplsfqtR LPSQRGPDRP EGIEEEGGER DRDrsgrlvd gflaiiwvdr slclfsyhrl rdlllivtri vellgrrgwe alkywwnllq ywsqelrnsa vsfvnataia vaegtdrvie llqrafrail hiptrirqgl eralq
| JOB-ID | P05878_045357ZukLZX8AAQEAADCTjqEAAABE |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P05878 |
| Description | sp|P05878|ENV_HV1SC Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 group M subtype B (isolate SC) OX=11702 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 855 |
| Download predictions | smoothed scores raw scores |