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>P05884_LOOPS
32-66, 97-145, 153-165, 171-189, 195-220, 226-258, 269-300, 309-322, 330-351, 365-403, 412-434, 445-462, 470-481, 495-529, 617-638, 672-682, 720-765
mgclgnqlli ailllsvygi yctqyvtvfy gVPAWRNATI PLFCATKNRD TWGTTQCLPD NGDYSElaln vtesfdawen tvteqaiedv wqlfetSIKP CVKLSPLCIT MRCNKSETDR WGLTKSSTTI TTAAPTSAPV SEKIDmvnet ssCIAQNNCT GLEQEqmisc KFTMTGLKRD KTKEYNETWy stdlVCEQGN STDNESRCYM NHCNTSVIQE scdkhYWDTI RFRYCAPPGY ALLRCNDTNY SGFMPKCSkv vvssctrmME TQTSTWFGFN GTRAENRTYI YWHGRDNRTI islnkyynLT MKCRRPGNKT VLpvtimsgL VFHSQPLTDR PKQAWCWFGG Kwkdaikevk qtivKHPRYT GTNNTDKINL TAPGGGDPEV TFMWTNCRGE FLYckmnwfl nWVEDRDVTT QRPKERHRRN YVPChirqii ntwhKVGKNV YLPPREGDLT CNstvtsliA NIDWTDGNQT Sitmsaevae lyrlELGDYK LVEITPIGLA PTDVKRYTTG GTSRNKRGVf vlgflgflat agsamgaasf rltaqsrtll agivqqqqql lgvvkrqqel lrltvwgtkn lqtrvtaiek yledqaqlna wgcafrQVCH TTVPWPNASL TPDWNNDTwq ewerkvdfle enitalleea qiqqeknmye lQKLNSWDVF GNwfdlaswi kyiqygiyvv vgvillrivi yivqmlaklR QGYRPVFSSP PSYFQTHTQQ DPALPTREGK EGDGGEGGGN SSWPWqieyi hflirqlirl ltwlfsncrt llsrayqilq pilqrlsatl rrirevlrte ltylqygwsy fheavqagwr satetlagaw gdlwetlrrg grwilaiprr irqgleltll
>P05884_HOTLOOPS
115-141, 272-283, 291-299, 363-387, 416-437, 470-478, 503-528, 583-591, 623-634, 861-880
mgclgnqlli ailllsvygi yctqyvtvfy gvpawrnati plfcatknrd twgttqclpd ngdyselaln vtesfdawen tvteqaiedv wqlfetsikp cvklsplcit mrcnKSETDR WGLTKSSTTI TTAAPTSAPV Sekidmvnet ssciaqnnct gleqeqmisc kftmtglkrd ktkeynetwy stdlvceqgn stdnesrcym nhcntsviqe scdkhywdti rfrycappgy allrcndtny sgfmpkcskv vvssctrmme tQTSTWFGFN GTRaenrtyi YWHGRDNRTi islnkyynlt mkcrrpgnkt vlpvtimsgl vfhsqpltdr pkqawcwfgg kwkdaikevk qtIVKHPRYT GTNNTDKINL TAPGGGDpev tfmwtncrge flyckmnwfl nwvedRDVTT QRPKERHRRN YVPCHIRqii ntwhkvgknv ylppregdlt cnstvtsliA NIDWTDGNqt sitmsaevae lyrlelgdyk lvEITPIGLA PTDVKRYTTG GTSRNKRGvf vlgflgflat agsamgaasf rltaqsrtll agivqqqqql lgvvkrqqel lrLTVWGTKN Lqtrvtaiek yledqaqlna wgcafrqvch ttVPWPNASL TPDWnndtwq ewerkvdfle enitalleea qiqqeknmye lqklnswdvf gnwfdlaswi kyiqygiyvv vgvillrivi yivqmlaklr qgyrpvfssp psyfqthtqq dpalptregk egdggegggn sswpwqieyi hflirqlirl ltwlfsncrt llsrayqilq pilqrlsatl rrirevlrte ltylqygwsy fheavqagwr satetlagaw gdlwetlrrg GRWILAIPRR IRQGLELTLL
>P05884_REM465
418-426, 734-758
mgclgnqlli ailllsvygi yctqyvtvfy gvpawrnati plfcatknrd twgttqclpd ngdyselaln vtesfdawen tvteqaiedv wqlfetsikp cvklsplcit mrcnksetdr wgltksstti ttaaptsapv sekidmvnet ssciaqnnct gleqeqmisc kftmtglkrd ktkeynetwy stdlvceqgn stdnesrcym nhcntsviqe scdkhywdti rfrycappgy allrcndtny sgfmpkcskv vvssctrmme tqtstwfgfn gtraenrtyi ywhgrdnrti islnkyynlt mkcrrpgnkt vlpvtimsgl vfhsqpltdr pkqawcwfgg kwkdaikevk qtivkhpryt gtnntdkinl tapgggdpev tfmwtncrge flyckmnwfl nwvedrdVTT QRPKERhrrn yvpchirqii ntwhkvgknv ylppregdlt cnstvtslia nidwtdgnqt sitmsaevae lyrlelgdyk lveitpigla ptdvkryttg gtsrnkrgvf vlgflgflat agsamgaasf rltaqsrtll agivqqqqql lgvvkrqqel lrltvwgtkn lqtrvtaiek yledqaqlna wgcafrqvch ttvpwpnasl tpdwnndtwq ewerkvdfle enitalleea qiqqeknmye lqklnswdvf gnwfdlaswi kyiqygiyvv vgvillrivi yivqmlaklr qgyrpvfssp psyFQTHTQQ DPALPTREGK EGDGGEGGgn sswpwqieyi hflirqlirl ltwlfsncrt llsrayqilq pilqrlsatl rrirevlrte ltylqygwsy fheavqagwr satetlagaw gdlwetlrrg grwilaiprr irqgleltll
| JOB-ID | P05884_111231ZwpZnn8AAQEAAGAHtTMAAABT |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P05884 |
| Description | sp|P05884|ENV_SIVMK Envelope glycoprotein gp160 OS=Simian immunodeficiency virus (isolate K6W) OX=11735 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 880 |
| Download predictions | smoothed scores raw scores |