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>P05889_LOOPS
1-29, 43-54, 64-72, 119-149, 162-183, 211-239, 249-260, 275-294, 349-358, 368-389
MGARASVLSG GELDKWEKIR LRPGGKKKYr lkhivwasre leRFAVNPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq riekkdtkea ldkieeeqnk ckkkaqqaAA DTGNSSQVSQ NYPIVQNLQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaa EWDRLHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqigWM TNNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqat qevknwmtet llvqnanpdc ktilkalgpa atleemmtAC QGVGGPGHka rvlaeamSQV TNPTTIMMQK GNFRNQRKT
>P05889_HOTLOOPS
1-31, 120-128, 280-292, 368-389
MGARASVLSG GELDKWEKIR LRPGGKKKYR Lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq riekkdtkea ldkieeeqnk ckkkaqqaaA DTGNSSQVsq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqat qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamSQV TNPTTIMMQK GNFRNQRKT
>P05889_REM465
1-9, 107-128
MGARASVLSg geldkwekir lrpggkkkyr lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq riekkdtkea ldkieeEQNK CKKKAQQAAA DTGNSSQVsq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqat qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnpttimmqk gnfrnqrkt
| JOB-ID | P05889_210935Zt9kD38AAQEAABReC-oAAAAB |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P05889 |
| Description | sp|P05889|GAG_HV1W2 Gag polyprotein (Fragment) OS=Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22) OX=11705 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 389 |
| Download predictions | smoothed scores raw scores |