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>P05893_LOOPS
1-29, 65-77, 111-152, 164-193, 210-242, 252-262, 277-294, 336-343, 351-358, 372-466
MGARNAVLSG KKADELEKIR LRPGGKKKYm lkhvvwaane ldrfglaesl lenkegcqki lsvlAPLVPT GSENLKSlyn tvcviwciha eekvkhteea kqivqrhlvv ETGTAETMPK TSRPTAPSSG RGGNYPVQQI GGNYVHLPLS PRtlnawvkl ieeKKFGAEV VPGFQALSEG CTPYDINQML NCVgdhqaam qiirdiineE AADWDLQHPQ PAPQQGQLRE PSGSDIAGTT SSvdeqiqwm yRQQNPIPVG NIyrrwiqlr lqkcvrMYNP INILDVKQRP KEPFqsyvdr fykslraeqt daavknwmtq tlliqnanpd cklvlKGLGV NPTleemlta CQGVGGPGqk arlmaealke aLRPVPTPFA AAQQRGPRKP IKCWNCGKEG HSARQCRAPR RQRCWKCGKM DHVMAKCPDR QAGFLGLGPW GKKPRNFPMA QVHQGLTPTA PPEDPAvdll knymqlgkqq resrekpyke vtedllhlns lfggdq
>P05893_HOTLOOPS
1-30, 111-133, 254-261, 281-293, 378-391, 399-412, 479-489, 494-506
MGARNAVLSG KKADELEKIR LRPGGKKKYM lkhvvwaane ldrfglaesl lenkegcqki lsvlaplvpt gsenlkslyn tvcviwciha eekvkhteea kqivqrhlvv ETGTAETMPK TSRPTAPSSG RGGnypvqqi ggnyvhlpls prtlnawvkl ieekkfgaev vpgfqalseg ctpydinqml ncvgdhqaam qiirdiinee aadwdlqhpq papqqgqlre psgsdiagtt ssvdeqiqwm yrqQNPIPVG Niyrrwiqlr lqkcvrmynp INILDVKQRP KEPfqsyvdr fykslraeqt daavknwmtq tlliqnanpd cklvlkglgv nptleemlta cqgvggpgqk arlmaealke alrpvptPFA AAQQRGPRKP IkcwncgkEG HSARQCRAPR RQrcwkcgkm dhvmakcpdr qagflglgpw gkkprnfpma qvhqgltpta ppedpavdll knymqlgkQQ RESREKPYKe vteDLLHLNS LFGGDQ
>P05893_REM465
1-10, 114-131, 220-240, 380-388, 398-411, 477-489
MGARNAVLSG kkadelekir lrpggkkkym lkhvvwaane ldrfglaesl lenkegcqki lsvlaplvpt gsenlkslyn tvcviwciha eekvkhteea kqivqrhlvv etgTAETMPK TSRPTAPSSG Rggnypvqqi ggnyvhlpls prtlnawvkl ieekkfgaev vpgfqalseg ctpydinqml ncvgdhqaam qiirdiinee aadwdlqhpQ PAPQQGQLRE PSGSDIAGTT ssvdeqiqwm yrqqnpipvg niyrrwiqlr lqkcvrmynp inildvkqrp kepfqsyvdr fykslraeqt daavknwmtq tlliqnanpd cklvlkglgv nptleemlta cqgvggpgqk arlmaealke alrpvptpfA AAQQRGPRkp ikcwncgKEG HSARQCRAPR Rqrcwkcgkm dhvmakcpdr qagflglgpw gkkprnfpma qvhqgltpta ppedpavdll knymqlGKQQ RESREKPYKe vtedllhlns lfggdq
| JOB-ID | P05893_054230ZukWxn8AAQEAADCTlMsAAABC |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P05893 |
| Description | sp|P05893|GAG_SIVMK Gag polyprotein OS=Simian immunodeficiency virus (isolate K6W) OX=11735 GN=gag PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 506 |
| Download predictions | smoothed scores raw scores |