Download PostScript file
>P05896_LOOPS
1-29, 65-77, 111-152, 176-192, 210-240, 253-261, 276-295, 305-315, 336-344, 351-358, 372-472, 487-516, 521-557, 568-581, 593-624, 639-665, 676-754, 763-776, 785-792, 807-850, 864-872, 910-922, 927-945, 978-990, 1003-1017, 1025-1057, 1082-1093, 1101-1109, 1131-1142, 1157-1166, 1197-1221, 1237-1249, 1261-1277, 1291-1303, 1339-1352, 1388-1400, 1410-1417, 1424-1448
MGARNSVLSG KKADELEKIR LRPGGKKKYm lkhvvwaane ldrfglaesl lenkegcqki lsvlAPLVPT GSENLKSlyn tvcviwciha eekvkhteea kqivqrhlvm ETGTAETMPK TSRPTAPFSG RGGNYPVQQI GGNYTHLPLS PRtlnawvkl ieekkfgaev vsgfqALSEG CLPYDINQML NCvgdhqaam qiirdiineE AADWDLQHPQ QAPQQGQLRE PSGSDIAGTT stveeqiqwm yrQQNPIPVG Niyrrwiqlg lqkcvRMYNP TNILDVKQGP KEPFQsyvdr fyksLRAEQT DPAVKnwmtq tlliqnanpd cklvlKGLGT NPTLeemlta CQGVGGPGqk arlmaealke aLAPAPIPFA AAQQKGPRKP IKCWNCGKEG HSARQCRAPR RQGCWKCGKM DHVMAKCPNR QAGFFRPWPL GKEAPQFPHG SSASGADANC SPRRTSCGSA KElhalgqaa erkqreALQG GDRGFAAPQF SLWRRPVVTA HIEGQPvevl LDTGADDSIV TGIELGPHYT PKIVGGIGGF INTKEYKnve ievlgkrIKG TIMTGDTPIN Ifgrnlltal gmSLNLPIAK VEPVKSPLKP GKDGPKLKQW PLSKekival reicekmeKD GQLEEAPPTN PYNTPTFAIK KKDKNkwrml idfreLNRVT QDFTEVQLGI PHPAGLAKRK RITVLDIGDA YFSIPLDEEF RQYTAFTLPS VNNAEPGKRY IYKVLPQGWK GSPAifqytm rhVLEPFRKA NPDVTLvqym ddilIASDRT DLehdrvvlq lkellnSIGF SSPEEKFQKD PPFQWMGYEL WPTKWKLQKI ELPQRETWTV ndiqklvgvl nwaAQIYPGI KTkhlcrlir gkmtlteevq wtemaeaeye enkiilsqeQ EGCYYQESKP LEatviKSQD NQWSYKIHQE DKILKvgkfa kiknthtngv rllahviqki gkeaiviWGQ VPKFHLPVEK dvweqwwtdy wqVTWIPEWD FISTPPLvrl vfnlVKDPIE GEETYYVDGS CSKQSKEGKA GYITDRGkdk vkvleqttnq qaeleaflma lTDSGPKANI IVDsqyvmgi ITGCPTESEs rlvnqiieem ikkteiyvaw VPAHKGIGGN QEidhlvsqg irqvlfLEKI EPAQEEhsky hsnikelvfk fglprlvakq ivdtcdKCHQ KGEAIHGQVN SDLGTWQMDC Thlegkiviv avhvasGFIE AEVIPQETGr qtalfllkla SRWPITHLHT DNGANFAsqe vkmvawwagi EHTFGVPYNP QSQgvveamn hhlknqidri reqansveti vlmavhcmNF KRRGGIGDMT PAerlinmit teqeiqfqqs knskfknfrv yyregrdQLW KGPGELLWKG egavilkvgT DIKVVPRrka kiiKDYGGGK EMDSSSHMED TGEAREVA
>P05896_HOTLOOPS
1-30, 111-130, 281-291, 379-389, 400-412, 533-543, 567-578, 601-624, 639-665, 678-702, 727-737, 807-822, 1034-1058, 1241-1249, 1366-1376, 1407-1448
MGARNSVLSG KKADELEKIR LRPGGKKKYM lkhvvwaane ldrfglaesl lenkegcqki lsvlaplvpt gsenlkslyn tvcviwciha eekvkhteea kqivqrhlvm ETGTAETMPK TSRPTAPFSG rggnypvqqi ggnythlpls prtlnawvkl ieekkfgaev vsgfqalseg clpydinqml ncvgdhqaam qiirdiinee aadwdlqhpq qapqqgqlre psgsdiagtt stveeqiqwm yrqqnpipvg niyrrwiqlg lqkcvrmynp TNILDVKQGP Kepfqsyvdr fykslraeqt dpavknwmtq tlliqnanpd cklvlkglgt nptleemlta cqgvggpgqk arlmaealke alapapipFA AAQQKGPRKp ikcwncgkeG HSARQCRAPR RQgcwkcgkm dhvmakcpnr qagffrpwpl gkeapqfphg ssasgadanc sprrtscgsa kelhalgqaa erkqrealqg gdrgfaapqf slwrrpvvta hiegqpvevl ldtgaddsiv tgIELGPHYT PKIvggiggf intkeyknve ievlgkRIKG TIMTGDTPin ifgrnlltal gmslnlpiak VEPVKSPLKP GKDGPKLKQW PLSKekival reicekmeKD GQLEEAPPTN PYNTPTFAIK KKDKNkwrml idfrelnRVT QDFTEVQLGI PHPAGLAKRK RItvldigda yfsipldeef rqytafTLPS VNNAEPGkry iykvlpqgwk gspaifqytm rhvlepfrka npdvtlvqym ddiliasdrt dlehdrvvlq lkellnSIGF SSPEEKFQKD PPfqwmgyel wptkwklqki elpqretwtv ndiqklvgvl nwaaqiypgi ktkhlcrlir gkmtlteevq wtemaeaeye enkiilsqeq egcyyqeskp leatviksqd nqwsykihqe dkilkvgkfa kiknthtngv rllahviqki gkeaiviwgq vpkfhlpvek dvweqwwtdy wqvtwipewd fistpplvrl vfnlvkdpie geeTYYVDGS CSKQSKEGKA GYITDRGKdk vkvleqttnq qaeleaflma ltdsgpkani ivdsqyvmgi itgcpteses rlvnqiieem ikkteiyvaw vpahkgiggn qeidhlvsqg irqvlfleki epaqeehsky hsnikelvfk fglprlvakq ivdtcdkchq kgeaihgqvn sdlgtwqmdc thlegkiviv avhvasgfie AEVIPQETGr qtalfllkla srwpithlht dnganfasqe vkmvawwagi ehtfgvpynp qsqgvveamn hhlknqidri reqansveti vlmavhcmnf krrggigdmt paerlinmit teqeiQFQQS KNSKFKnfrv yyregrdqlw kgpgellwkg egavilKVGT DIKVVPRRKA KIIKDYGGGK EMDSSSHMED TGEAREVA
>P05896_REM465
1-10, 218-236, 382-389, 398-411, 447-466, 1426-1448
MGARNSVLSG kkadelekir lrpggkkkym lkhvvwaane ldrfglaesl lenkegcqki lsvlaplvpt gsenlkslyn tvcviwciha eekvkhteea kqivqrhlvm etgtaetmpk tsrptapfsg rggnypvqqi ggnythlpls prtlnawvkl ieekkfgaev vsgfqalseg clpydinqml ncvgdhqaam qiirdiinee aadwdlqHPQ QAPQQGQLRE PSGSDIagtt stveeqiqwm yrqqnpipvg niyrrwiqlg lqkcvrmynp tnildvkqgp kepfqsyvdr fykslraeqt dpavknwmtq tlliqnanpd cklvlkglgt nptleemlta cqgvggpgqk arlmaealke alapapipfa aAQQKGPRKp ikcwncgKEG HSARQCRAPR Rqgcwkcgkm dhvmakcpnr qagffrpwpl gkeapqFPHG SSASGADANC SPRRTScgsa kelhalgqaa erkqrealqg gdrgfaapqf slwrrpvvta hiegqpvevl ldtgaddsiv tgielgphyt pkivggiggf intkeyknve ievlgkrikg timtgdtpin ifgrnlltal gmslnlpiak vepvksplkp gkdgpklkqw plskekival reicekmekd gqleeapptn pyntptfaik kkdknkwrml idfrelnrvt qdftevqlgi phpaglakrk ritvldigda yfsipldeef rqytaftlps vnnaepgkry iykvlpqgwk gspaifqytm rhvlepfrka npdvtlvqym ddiliasdrt dlehdrvvlq lkellnsigf sspeekfqkd ppfqwmgyel wptkwklqki elpqretwtv ndiqklvgvl nwaaqiypgi ktkhlcrlir gkmtlteevq wtemaeaeye enkiilsqeq egcyyqeskp leatviksqd nqwsykihqe dkilkvgkfa kiknthtngv rllahviqki gkeaiviwgq vpkfhlpvek dvweqwwtdy wqvtwipewd fistpplvrl vfnlvkdpie geetyyvdgs cskqskegka gyitdrgkdk vkvleqttnq qaeleaflma ltdsgpkani ivdsqyvmgi itgcpteses rlvnqiieem ikkteiyvaw vpahkgiggn qeidhlvsqg irqvlfleki epaqeehsky hsnikelvfk fglprlvakq ivdtcdkchq kgeaihgqvn sdlgtwqmdc thlegkiviv avhvasgfie aevipqetgr qtalfllkla srwpithlht dnganfasqe vkmvawwagi ehtfgvpynp qsqgvveamn hhlknqidri reqansveti vlmavhcmnf krrggigdmt paerlinmit teqeiqfqqs knskfknfrv yyregrdqlw kgpgellwkg egavilkvgt dikvvprrka kiikdYGGGK EMDSSSHMED TGEAREVA
| JOB-ID | P05896_024240ZzgGoH8AAQEAAGkWaUUAAAAX |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P05896 |
| Description | sp|P05896|POL_SIVM1 Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate Mm142-83) OX=11733 GN=gag-pol PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1448 |
| Download predictions | smoothed scores raw scores |