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>P07720_LOOPS
9-20, 28-35, 51-64, 91-100, 118-140, 153-232, 278-298, 310-321, 329-337, 348-392, 405-415, 422-460, 483-491, 501-516, 522-541, 548-566, 576-604, 612-663, 698-709, 724-736, 748-756, 773-792, 804-811, 826-838, 857-891, 897-935, 948-963, 997-1121, 1128-1140, 1154-1164, 1246-1256, 1320-1342, 1353-1364, 1413-1428, 1436-1444, 1491-1539, 1549-1564, 1573-1635, 1659-1698, 1731-1751, 1759-1771, 1779-1792, 1810-1864, 1879-1900, 1906-1941, 1948-1977, 1989-2016, 2028-2037, 2047-2094, 2107-2124, 2141-2149, 2228-2241, 2282-2301, 2338-2348, 2405-2425, 2446-2518, 2524-2533, 2581-2606, 2615-2624, 2634-2668, 2682-2700, 2712-2730, 2755-2774, 2801-2814, 2838-2845, 2867-2880, 2898-2905, 2931-2942, 2999-3019, 3031-3059, 3090-3113, 3137-3150, 3168-3185, 3197-3222, 3229-3259, 3291-3316, 3328-3355, 3392-3412
magkailkGK GGGPPRRVSK etakktrQSR VQMPNglvlm rmmgilwhav AGTARSPVLK SFWKsvplkq ataalrkikk avstlmvglq RRGKRRSAVD wtgwllvvvl lgvtlaaTVR KERDGTTVIR AEGKDAATQV rvengtcvil atDMGSWCDD SLTYECVTID QGEEPVDVDC SCRNVDGVYL EYGRCGKQEG SRTRRSVLIP SHAQGDLTGR GHKWLEGDSL RThltrvegw vwknkvltla viavvwltve svvtrvavvv vllclapVYA SRCTHLENRD FVTGTQGTtr vtlvlelggC VTITAEGKPS MdvwldsiYQ ENPAKTReyc lhaklsdTKV AARCPTMGPA TLAEEHQSGT VCKRDQSDRG WGNHCGLFGK GSivtcvkas ceakKKATGH VYDANkivyt vKVEPHTGDY VAANETHSGR KTASFTVSSE RTILTMGDYG dvsllcrvas gvdlaqtvil elDKTSEHLP Tawqvhrdwf NDLALPWKHE GAQNWNnaer lVEFGAPHAV KMDVYNLGDQ TgvllksLAG VPVAHIDGTK YHLKSGhvtc evgleKLKMK GLTYTMCDKT KFTWKRIPTD SGHDtvvmev aFSGTKPCRI PVRAVAHGSP DVNVAMLMTP NPTIENNGGG FIEMQLPPGD NIIyvgelsh qwfqkgssig rvfqktrkgi erltvigEHA WDFGSTGGFl tsvgkalhtv lggAFNSLFG GVGFLPkilv gvvlawlGLN MRNPTMsmsf llagglvlam tlGVGADVGC AVDTERMELR CGeglvvwre vseWYDNYAY Ypetlgalas aiketFEEGT CGIVPQNRle mamwrssate lnlalvEGDA NLTVVVDKLD PTDYRGGIPS LLKKGKDIKV SwkswgHSMI WSVPEAPRLF MVGTEGSSEC PLERRKTGVF TVAEFgvglr tkvfldfRQE STHECDTGVM GAAvkngmav htdqslwmks vrndtgtyiv ellvtdLRNC SWPASHTIDN AEVVDSELFL PASLAGPRSW YNRIPGYSEQ VKGPWKYSPI RVTREECPGT RVTINADCDK RGASVRSTTE SGKVIPEWCC RTCTLPPVTF RTGTDCWYAM EIRPVHDQGG LvrsmvvADN GELLSEGGIP givalfvvle yviRRRPATG TTAMwggivv lallvtglvk ieslvryvva vgitfhlelg peivaltllq avfelrvgll safalrsnlt vremvtiyfl llvleLGLPS EGLGALwkwg dalamgalif ractaeektg vglllmalmt qqdlatvhyg lmlflgvasc csiwklirgH REQKGLTWIV PLAGLLGGEG SGvrlvafwe ltVHGRRRSF SEPLtvvgvm ltlasgmirh tsqealcala vasflllmlv lgtrkmqlva ewSGCVEWHP ELMNEGGEvs lrvrqDSMGN FHLTelekee rvmafwllag laasafhwsg ilgvmglwtl semlrtarrs GLVFSGQGGR ERGDRPFEVK DGVYRIFSPG LLWGQRQVGV GYGSKGVLHt mwhvtrgaAL SIDDAVAGPY WADVkedvvc ygGAWSLEEK WKGETVQVHA FPPGRAHEVH QCQPGELLLD TGRRIGAVPI DLAKGTSGSP ILNSQgvvvg lygnglktne tyvssiaqGE AEKSRPNLPP AVTGTGWTAK GQITVLDMHP GSGKTHRVlp elirqcidrr lrtlvlaptr vvlkemeral NGKRVRFHSP AVGDQQVGGS IvdvmchaTY VNRRLLPQGR QnwevaimDE AHWTDPHSIA ARghlytlak enkcalvlmT ATPPGKSEPF PESNGAISSE EKQIPDGEWR DGFDWITEYE GRTAWFVPSS AKGGiiartl iqkgksviCL NSKTFEKDYS RVRDEKPDFV vttdiSEMGA NLDVSRVIDG RTNIKPEEVD GRVELTGTRR VttasaaQRR GRVGRQEGRT DEYIYSGQCD DDDSGLVqwk eaqilldnIT TLRGPVATFY GPEQDKMPEV AGHFRLteek rkhfrhlLTH CDFTPWLawh vaanvsSVTS RNWTWEGPEE NTVDEANGDL VTFRSPNGAE RTLRPVWRDA RMFRegrdir efvayaSGRR SFGDVLSGMS GVPEllrhrc vsamdvfytl MHEEPGSRAm kmaerdapea fltvvemmvl glatlgvvwc fvvrtsisrm mlgtlvllas lallwaggvs ygnmagvali fytlltvLQP EAGKQRSSDD Nklayflltl cslaglvaan emgflektka dlstvlwseh eELRSWEEWT NIDIQPARSW Gtyvlvvslf tpyiihqlqt kiqqlvnsav atgaqamRDL GGGAPFFGva ghvmalgvvs lvgatptslv vgvglaafhl aivvsgleae ltqrahkvff samvRNPMVD GDVINPFGEG EAKPAlyerk mslvlaivlc lmsvvMNRTV PSTPRLLLWD WRQRDNCSNQ RRTPFGRCQA CGLSGVVRGS LWGFCPLGHR LWLRASGSRR GGSEGDTLgd lwkRKLNGCT KEEffayrrt gileterdka rellkrgetn mglavsrgta klawleergy ATLKGEVVDL GCGRGGWSYY AASRPAvmsv kacaIAGKGH ETPKmvtslg wnlIKFRAGM DVFSMQPHRA DTIMCDIGES NPDAVVEGer trkvillmeq wKNRNPTATC VFKALAPYRP evtealhrfq lQWGGGLVRT PFSRNSTHEM yystaitgni vnsvniqsrk llarFGDQRG PTRVPELDLG VGTRcvvlae dkvkekdvqe risalreqyg ETWHMDREHP YRTWqywaat acanrvggal ingvvklLSW PWNARedvvr mamtdttafg qqrvfkEKVD TKAQEPQPGT kvimravndw ilerlarKSK PRMCSreefi akvksnaalg awsdeqnrws SAKEAVEDPA FWqlvdeere rhlagrcahc vynmmgkrek klgefgvakg sraiwymwlg srflefeaLG FLNEDHWASR GSSGSGVEGi slnylgwhlk GLSTLEGGLF YADDTAGWDT KVTNADLEDe eqllrymege hkqlaatimq kayhakvvkV ARPSRDGGCI MDVITRRDQR GSGqvvtyal ntltnikvql irmmegEGVI EASDAHNPRL lrverwlrdh geerlgrMLV SGDDCVVRPV DDRFSgalyf lndmakTRKD IGEWDHSVGF SNWEEVPFCS HHfhelvmKD GRTLIVPCRD QDELVGRARV SPGCGRSVRe taclskaygq mwllsyfhrr dlrtlglaic SAVPVDWVPA GRTTWSIHAS GAWMTTedml dvwnrvwILD NPFMHSKEKI AEWRDVPYLP KSHDMlcssl vgrkeraewa kniwgavekv rkmigqekfk dYLSCMDRHD LHWESKLESS II
>P07720_HOTLOOPS
1-36, 86-103, 114-143, 171-181, 191-223, 279-299, 314-322, 359-369, 405-416, 431-453, 557-567, 589-603, 864-887, 917-926, 1031-1097, 1157-1166, 1354-1365, 1491-1511, 1518-1526, 1621-1634, 1658-1670, 1713-1722, 1729-1749, 1763-1770, 1813-1838, 1870-1878, 1883-1967, 2000-2009, 2054-2096, 2105-2116, 2449-2461, 2503-2548, 2555-2569, 2679-2687, 2710-2719, 2754-2773, 2778-2788, 2796-2806, 2859-2882, 2896-2904, 3089-3098, 3104-3114, 3139-3150, 3165-3179, 3240-3258, 3397-3412
MAGKAILKGK GGGPPRRVSK ETAKKTRQSR VQMPNGlvlm rmmgilwhav agtarspvlk sfwksvplkq ataalrkikk avstlMVGLQ RRGKRRSAVD WTGwllvvvl lgvTLAATVR KERDGTTVIR AEGKDAATQV RVEngtcvil atdmgswcdd sltyecvtid QGEEPVDVDC Scrnvdgvyl EYGRCGKQEG SRTRRSVLIP SHAQGDLTGR GHKwlegdsl rthltrvegw vwknkvltla viavvwltve svvtrvavvv vllclapvYA SRCTHLENRD FVTGTQGTTr vtlvlelggc vtiTAEGKPS MDvwldsiyq enpaktreyc lhaklsdtkv aarcptmgPA TLAEEHQSGt vckrdqsdrg wgnhcglfgk gsivtcvkas ceakKKATGH VYDANKivyt vkvephtgdy VAANETHSGR KTASFTVSSE RTIltmgdyg dvsllcrvas gvdlaqtvil eldktsehlp tawqvhrdwf ndlalpwkhe gaqnwnnaer lvefgaphav kmdvynlgdq tgvllkslag vpvahiDGTK YHLKSGHvtc evgleklkmk gltytmcdKT KFTWKRIPTD SGHdtvvmev afsgtkpcri pvravahgsp dvnvamlmtp nptiennggg fiemqlppgd niiyvgelsh qwfqkgssig rvfqktrkgi erltvigeha wdfgstggfl tsvgkalhtv lggafnslfg gvgflpkilv gvvlawlgln mrnptmsmsf llagglvlam tlgvgadvgc avdtermelr cgeglvvwre vsewydnyay ypetlgalas aiketfeegt cgivpqnrle mamwrssate lnlalvegda nltVVVDKLD PTDYRGGIPS LLKKGKDikv swkswghsmi wsvpeaprlf mvgtegSSEC PLERRKtgvf tvaefgvglr tkvfldfrqe sthecdtgvm gaavkngmav htdqslwmks vrndtgtyiv ellvtdlrnc swpashtidn aevvdselfl paslagprsw YNRIPGYSEQ VKGPWKYSPI RVTREECPGT RVTINADCDK RGASVRSTTE SGKVIPEWCC RTCTLPPvtf rtgtdcwyam eirpvhdqgg lvrsmvvadn gellseggip givalfvvle yvirrrPATG TTAMWGgivv lallvtglvk ieslvryvva vgitfhlelg peivaltllq avfelrvgll safalrsnlt vremvtiyfl llvlelglps eglgalwkwg dalamgalif ractaeektg vglllmalmt qqdlatvhyg lmlflgvasc csiwklirgh reqkgltwiv plagllggeg sgvrlvafwe ltvHGRRRSF SEPLTvvgvm ltlasgmirh tsqealcala vasflllmlv lgtrkmqlva ewsgcvewhp elmneggevs lrvrqdsmgn fhltelekee rvmafwllag laasafhwsg ilgvmglwtl semlrtarrs GLVFSGQGGR ERGDRPFEVK DgvyrifSPG LLWGQRqvgv gygskgvlht mwhvtrgaal siddavagpy wadvkedvvc yggawsleek wkgetvqvha fppgrahevh qcqpgellld tgrrigavpi DLAKGTSGSP ILNSqgvvvg lygnglktne tyvssiaQGE AEKSRPNLPP avtgtgwtak gqitvldmhp gsgkthrvlp elirqcidrr lrTLVLAPTR VVlkemerAL NGKRVRFHSP AVGDQQVGGs ivdvmchaty vnRRLLPQGR qnwevaimde ahwtdphsia arghlytlak enkcalvlmt atPPGKSEPF PESNGAISSE EKQIPDGEwr dgfdwiteye grtawfvpss akggiiartL IQKGKSVIcl nsKTFEKDYS RVRDEKPDFV VTTDISEMGA NLDVSRVIDG RTNIKPEEVD GRVELTGTRR VTTASAAQRR GRVGRQEGRT DEYIYSGqcd dddsglvqwk eaqilldnit tlrgpvatfY GPEQDKMPEv aghfrlteek rkhfrhllth cdftpwlawh vaanvssvts rnwTWEGPEE NTVDEANGDL VTFRSPNGAE RTLRPVWRDA RMFREGrdir efvaYASGRR SFGDVLsgms gvpellrhrc vsamdvfytl mheepgsram kmaerdapea fltvvemmvl glatlgvvwc fvvrtsisrm mlgtlvllas lallwaggvs ygnmagvali fytlltvlqp eagkqrssdd nklayflltl cslaglvaan emgflektka dlstvlwseh eelrsweewt nidiqparsw gtyvlvvslf tpyiihqlqt kiqqlvnsav atgaqamrdl gggapffgva ghvmalgvvs lvgatptslv vgvglaafhl aivvsgleae ltqrahkvff samvrnpmvd gdvinpfgeg eakpalyerk mslvlaivlc lmsvvmnrTV PSTPRLLLWD Wrqrdncsnq rrtpfgrcqa cglsgvvrgs lwgfcplghr lwLRASGSRR GGSEGDTLGD LWKRKLNGCT KEEFFAYRRT GILETERDka rellKRGETN MGLAVSRGTa klawleergy atlkgevvdl gcgrggwsyy aasrpavmsv kacaiagkgh etpkmvtslg wnlikfragm dvfsmqphra dtimcdiges npdavveger trkvillmEQ WKNRNPTatc vfkalapyrp evtealhrfQ LQWGGGLVRt pfsrnsthem yystaitgni vnsvniqsrk llaRFGDQRG PTRVPELDLG VGTrcvvLAE DKVKEKDVqe risalREQYG ETWHMDrehp yrtwqywaat acanrvggal ingvvkllsw pwnaredvvr mamtdttaFG QQRVFKEKVD TKAQEPQPGT KVimravndw ilerlARKSK PRMCsreefi akvksnaalg awsdeqnrws sakeavedpa fwqlvdeere rhlagrcahc vynmmgkrek klgefgvakg sraiwymwlg srflefealg flnedhwasr gssgsgvegi slnylgwhlk glstlegglf yaddtagwdt kvtnadlede eqllrymege hkqlaatimq kayhakvvKV ARPSRDGGci mdvITRRDQR GSGQvvtyal ntltnikvql irmmegegVI EASDAHNPRL lrverwlrdh geerLGRMLV SGDDCVVRPv ddrfsgalyf lndmaktrkd igewdhsvgf snweevpfcs hhfhelvmkd grtlivpcrD QDELVGRARV SPGCGRSVre taclskaygq mwllsyfhrr dlrtlglaic savpvdwvpa grttwsihas gawmttedml dvwnrvwild npfmhskeki aewrdvpylp kshdmlcssl vgrkeraewa kniwgavekv rkmigqekfk dylscmDRHD LHWESKLESS II
>P07720_REM465
1-30, 88-96, 363-377, 915-923, 1072-1082, 1658-1665, 1942-1957, 2867-2877, 2925-2933, 3405-3412
MAGKAILKGK GGGPPRRVSK ETAKKTRQSR vqmpnglvlm rmmgilwhav agtarspvlk sfwksvplkq ataalrkikk avstlmvGLQ RRGKRRsavd wtgwllvvvl lgvtlaatvr kerdgttvir aegkdaatqv rvengtcvil atdmgswcdd sltyecvtid qgeepvdvdc scrnvdgvyl eygrcgkqeg srtrrsvlip shaqgdltgr ghkwlegdsl rthltrvegw vwknkvltla viavvwltve svvtrvavvv vllclapvya srcthlenrd fvtgtqgttr vtlvlelggc vtitaegkps mdvwldsiyq enpaktreyc lhaklsdtkv aarcptmgpa tlAEEHQSGT VCKRDQSdrg wgnhcglfgk gsivtcvkas ceakkkatgh vydankivyt vkvephtgdy vaanethsgr ktasftvsse rtiltmgdyg dvsllcrvas gvdlaqtvil eldktsehlp tawqvhrdwf ndlalpwkhe gaqnwnnaer lvefgaphav kmdvynlgdq tgvllkslag vpvahidgtk yhlksghvtc evgleklkmk gltytmcdkt kftwkriptd sghdtvvmev afsgtkpcri pvravahgsp dvnvamlmtp nptiennggg fiemqlppgd niiyvgelsh qwfqkgssig rvfqktrkgi erltvigeha wdfgstggfl tsvgkalhtv lggafnslfg gvgflpkilv gvvlawlgln mrnptmsmsf llagglvlam tlgvgadvgc avdtermelr cgeglvvwre vsewydnyay ypetlgalas aiketfeegt cgivpqnrle mamwrssate lnlalvegda nltvvvdkld ptdyrggips llkkgkdikv swkswghsmi wsvpeaprlf mvgtEGSSEC PLErrktgvf tvaefgvglr tkvfldfrqe sthecdtgvm gaavkngmav htdqslwmks vrndtgtyiv ellvtdlrnc swpashtidn aevvdselfl paslagprsw ynripgyseq vkgpwkyspi rvtreecpgt rvtinadcdk rGASVRSTTE SGkvipewcc rtctlppvtf rtgtdcwyam eirpvhdqgg lvrsmvvadn gellseggip givalfvvle yvirrrpatg ttamwggivv lallvtglvk ieslvryvva vgitfhlelg peivaltllq avfelrvgll safalrsnlt vremvtiyfl llvlelglps eglgalwkwg dalamgalif ractaeektg vglllmalmt qqdlatvhyg lmlflgvasc csiwklirgh reqkgltwiv plagllggeg sgvrlvafwe ltvhgrrrsf sepltvvgvm ltlasgmirh tsqealcala vasflllmlv lgtrkmqlva ewsgcvewhp elmneggevs lrvrqdsmgn fhltelekee rvmafwllag laasafhwsg ilgvmglwtl semlrtarrs glvfsgqggr ergdrpfevk dgvyrifspg llwgqrqvgv gygskgvlht mwhvtrgaal siddavagpy wadvkedvvc yggawsleek wkgetvqvha fppgrahevh qcqpgellld tgrrigavpi dlakgtsgsp ilnsqgvvvg lygnglktne tyvssiaQGE AEKSRpnlpp avtgtgwtak gqitvldmhp gsgkthrvlp elirqcidrr lrtlvlaptr vvlkemeral ngkrvrfhsp avgdqqvggs ivdvmchaty vnrrllpqgr qnwevaimde ahwtdphsia arghlytlak enkcalvlmt atppgksepf pesngaisse ekqipdgewr dgfdwiteye grtawfvpss akggiiartl iqkgksvicl nsktfekdys rvrdekpdfv vttdisemga nldvsrvidg rtnikpeevd grveltgtrr vTTASAAQRR GRVGRQEgrt deyiysgqcd dddsglvqwk eaqilldnit tlrgpvatfy gpeqdkmpev aghfrlteek rkhfrhllth cdftpwlawh vaanvssvts rnwtwegpee ntvdeangdl vtfrspngae rtlrpvwrda rmfregrdir efvayasgrr sfgdvlsgms gvpellrhrc vsamdvfytl mheepgsram kmaerdapea fltvvemmvl glatlgvvwc fvvrtsisrm mlgtlvllas lallwaggvs ygnmagvali fytlltvlqp eagkqrssdd nklayflltl cslaglvaan emgflektka dlstvlwseh eelrsweewt nidiqparsw gtyvlvvslf tpyiihqlqt kiqqlvnsav atgaqamrdl gggapffgva ghvmalgvvs lvgatptslv vgvglaafhl aivvsgleae ltqrahkvff samvrnpmvd gdvinpfgeg eakpalyerk mslvlaivlc lmsvvmnrtv pstprlllwd wrqrdncsnq rrtpfgrcqa cglsgvvrgs lwgfcplghr lwlrasgsrr ggsegdtlgd lwkrklngct keeffayrrt gileterdka rellkrgetn mglavsrgta klawleergy atlkgevvdl gcgrggwsyy aasrpavmsv kacaiagkgh etpkmvtslg wnlikfragm dvfsmqphra dtimcdiges npdavveger trkvillmeq wknrnptatc vfkalapyrp evtealhrfq lqwggglvrt pfsrnsthem yystaitgni vnsvniqsrk llarfgdqrg ptrvpeldlg vgtrcvvlae dkvkekdvqe risalreqyg etwhmdrehp yrtwqywaat acanrvggal ingvvkllsw pwnaredvvr mamtdttafg qqrvfkEKVD TKAQEPQpgt kvimravndw ilerlarksk prmcsreefi akvksnaalg awsdEQNRWS SAKeavedpa fwqlvdeere rhlagrcahc vynmmgkrek klgefgvakg sraiwymwlg srflefealg flnedhwasr gssgsgvegi slnylgwhlk glstlegglf yaddtagwdt kvtnadlede eqllrymege hkqlaatimq kayhakvvkv arpsrdggci mdvitrrdqr gsgqvvtyal ntltnikvql irmmegegvi easdahnprl lrverwlrdh geerlgrmlv sgddcvvrpv ddrfsgalyf lndmaktrkd igewdhsvgf snweevpfcs hhfhelvmkd grtlivpcrd qdelvgrarv spgcgrsvre taclskaygq mwllsyfhrr dlrtlglaic savpvdwvpa grttwsihas gawmttedml dvwnrvwild npfmhskeki aewrdvpylp kshdmlcssl vgrkeraewa kniwgavekv rkmigqekfk dylscmdrhd lhweSKLESS II
| JOB-ID | P07720_071146Zukrsn8AAQEAADCTl7oAAABJ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P07720 |
| Description | sp|P07720|POLG_TBEVS Genome polyprotein OS=Tick-borne encephalitis virus Far Eastern subtype (strain Sofjin) OX=11087 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 3412 |
| Download predictions | smoothed scores raw scores |