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>P08563_LOOPS
1-8, 29-129, 134-167, 173-280, 298-481, 487-521, 574-663, 671-718, 729-738, 756-784, 794-1012
MASTTPITme dlqkaleaqs ralraglaAG ASQSRRPRPP RQRDSSTSGD DSGRDSGGPR RRRGNRGRGQ RKDWSRAPPP PEERQESRSQ TPAPKPSRAP PQQPQPPRMQ TGRGGSAPRP ELGPPTNPFq aavARGLRPP LHDPDTEAPT EACVTSWLWS EGEGAVFyrv dlHFTNLGTP PLDEDGRWDP ALMYNPCGPE PPAHVVRAYN QPAGDVRGVW GKGERTYAEQ DFRVGGTRWH RLLRMPVRGL DGDTAPLPPH TTERIETRSA RHPWRIRFGA pqaflaglll aavavgtARA GLQPRADMAA PPMPPQPPRA HGQHYGHHHH QLPFLGHDGH HGGTLRVGQH HRNASDVLPG HWLQGGWGCY NLSDWHQGTH VCHTKHMDFW CVEHDRPPPA TPTSLTTAAN STTAATPATA PPPCHAGLND SCGGFLSGCG PMRLRHGADT RCGRLICGLS TTAQYPPTRF GCAMRWGLPP WelvvlTARP EDGWTCRGVP AHPGTRCPEL VSPMGRATCS Pasalwlata nalsldhafa afvllvpwvl ifmvcrracr rrgaaaalta vvlQGYNPPA YGEEAFTYLC TAPGCATQTP VPVRLAGVRF ESKIVDGGCF APWDLEATGA CICEIPTDVS CEGLGAWVPT APCARIWNGT QRActfwavn AYSSGGYAQL ASYFNPGGSY YKQYHPTACE VEPAFGHSDA ACWGFPTDtv msvfalasYV QHPHKTVRvk fhtetrtvwq lsvagVSCNV TTEHPFCNTP HGQLEVQVPP DPGDlveyim nytGNQQSRW GLGSPNCHGP DWASPVCQRH SPDCSRLVGA TPERPRLRLV DADDPLLRTA PGPGEVWVTP VIGSQARKCG LHIRAGPYGH ATVEMPEWIH AHTTSDPWHP PGPLGLKFKT VRPVALPRAL APPRNVRVTG CYQCGTPALV EGLAPGGGNC HLTVNGEDVG AFPPGKFVTA ALLNTPPPYQ VSCGGESDRA SARVIDPAAQ SFTGVVYGTH TTavsetrqt waewaaahww qltlgaical llagllacca kclyylrgai apr
>P08563_HOTLOOPS
1-8, 27-108, 227-241, 247-273, 826-860, 917-928
MASTTPITme dlqkaleaqs ralragLAAG ASQSRRPRPP RQRDSSTSGD DSGRDSGGPR RRRGNRGRGQ RKDWSRAPPP PEERQESRSQ TPAPKPSRAP PQQPQPPRmq tgrggsaprp elgpptnpfq aavarglrpp lhdpdteapt eacvtswlws egegavfyrv dlhftnlgtp pldedgrwdp almynpcgpe ppahvvrayn qpagdvrgvw gkgertYAEQ DFRVGGTRWH RllrmpVRGL DGDTAPLPPH TTERIETRSA RHPwrirfga pqaflaglll aavavgtara glqpradmaa ppmppqppra hgqhyghhhh qlpflghdgh hggtlrvgqh hrnasdvlpg hwlqggwgcy nlsdwhqgth vchtkhmdfw cvehdrpppa tptslttaan sttaatpata pppchaglnd scggflsgcg pmrlrhgadt rcgrlicgls ttaqypptrf gcamrwglpp welvvltarp edgwtcrgvp ahpgtrcpel vspmgratcs pasalwlata nalsldhafa afvllvpwvl ifmvcrracr rrgaaaalta vvlqgynppa ygeeaftylc tapgcatqtp vpvrlagvrf eskivdggcf apwdleatga ciceiptdvs ceglgawvpt apcariwngt qractfwavn ayssggyaql asyfnpggsy ykqyhptace vepafghsda acwgfptdtv msvfalasyv qhphktvrvk fhtetrtvwq lsvagvscnv ttehpfcntp hgqlevqvpp dpgdlveyim nytgnqqsrw glgspnchgp dwaspvcqrh spdcsRLVGA TPERPRLRLV DADDPLLRTA PGPGEVWVTP vigsqarkcg lhiragpygh atvempewih ahttsdpwhp pgplglkfkt vrpvalPRAL APPRNVRVtg cyqcgtpalv eglapgggnc hltvngedvg afppgkfvta allntpppyq vscggesdra sarvidpaaq sftgvvygth ttavsetrqt waewaaahww qltlgaical llagllacca kclyylrgai apr
>P08563_REM465
1-8, 23-119, 313-328, 400-419
MASTTPITme dlqkaleaqs raLRAGLAAG ASQSRRPRPP RQRDSSTSGD DSGRDSGGPR RRRGNRGRGQ RKDWSRAPPP PEERQESRSQ TPAPKPSRAP PQQPQPPRMQ TGRGGSAPRp elgpptnpfq aavarglrpp lhdpdteapt eacvtswlws egegavfyrv dlhftnlgtp pldedgrwdp almynpcgpe ppahvvrayn qpagdvrgvw gkgertyaeq dfrvggtrwh rllrmpvrgl dgdtaplpph tterietrsa rhpwrirfga pqaflaglll aavavgtara glqpradmaa ppMPPQPPRA HGQHYGHHhh qlpflghdgh hggtlrvgqh hrnasdvlpg hwlqggwgcy nlsdwhqgth vchtkhmdfw cvehdrpppA TPTSLTTAAN STTAATPATa pppchaglnd scggflsgcg pmrlrhgadt rcgrlicgls ttaqypptrf gcamrwglpp welvvltarp edgwtcrgvp ahpgtrcpel vspmgratcs pasalwlata nalsldhafa afvllvpwvl ifmvcrracr rrgaaaalta vvlqgynppa ygeeaftylc tapgcatqtp vpvrlagvrf eskivdggcf apwdleatga ciceiptdvs ceglgawvpt apcariwngt qractfwavn ayssggyaql asyfnpggsy ykqyhptace vepafghsda acwgfptdtv msvfalasyv qhphktvrvk fhtetrtvwq lsvagvscnv ttehpfcntp hgqlevqvpp dpgdlveyim nytgnqqsrw glgspnchgp dwaspvcqrh spdcsrlvga tperprlrlv daddpllrta pgpgevwvtp vigsqarkcg lhiragpygh atvempewih ahttsdpwhp pgplglkfkt vrpvalpral apprnvrvtg cyqcgtpalv eglapgggnc hltvngedvg afppgkfvta allntpppyq vscggesdra sarvidpaaq sftgvvygth ttavsetrqt waewaaahww qltlgaical llagllacca kclyylrgai apr
| JOB-ID | P08563_060352Z7q6SH8AAQEAAFgY0xYAAAAU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P08563 |
| Description | sp|P08563|POLS_RUBVM Structural polyprotein OS=Rubella virus (strain M33) OX=11043 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1063 |
| Download predictions | smoothed scores raw scores |