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>P11193_LOOPS
10-82, 88-101, 109-135, 147-163, 169-242, 303-344, 374-402, 409-462, 471-486, 521-530, 570-579, 624-632, 645-678, 693-717, 726-734
masliyrqlL TNSYSVDLHD EIEQIGSEKT QNVTINPSPF AQTRYAPVNW GHGEINDSTT VEPILDGPYQ PTTFTPPNDY WIlinsnTNG VVYESTNNSD FwtavvaiEP HVNPVDRQYT IFGESKQFNV SNDSNkwkfl emfrssSQNE FYNRRTLTSD TRFvgilkYG GRVWTFHGET PRATTDSSST ANLNNISITI HSEFYIIPRS QESKCNEYIN NGLPPIQNTR NVVPLPLSSR SIqykraqvn ediivsktsl wkemqynrdi iirfkfgnsi vkmgglgykw seisykaany qyNYLRDGEQ VTAHTTCSVN GVNNFSYNGG SLPTDFGISR YEVIkensyv yvdywddska frnmvyvrsl aanLNSVKCT GGSYNFSIPV GAWPVMNGGA VSlhfagvTL STQFTDFVSL NSLRFRFSLT VDEPPFSILR TRTVNLYGLP AANPNNGNEY YEisgrfsli YLVPTNDDYQ TPIMNSvtvr qdlerqltdl reefnslsqe iamaqlidla LLPLDMFSMF sgikstidlt ksmatsvmkk frksklatsi semtnslsdA ASSASRNVSi rsnlsaisnw tnvsndvsnv tnslndistq tstiskkfrl kemITQTEGM SFddisaavl ktkiDMSTQI GKNTLPDIVT EASEKFIPKR SYRILKDDev meintegkff ayKINTFDEV PFDVNKFAEL VTDSPVIsai idfktLKNLN DNYGitrtea lnliksnpnm lrnfinqnnp iirnrieqli lqckl
>P11193_HOTLOOPS
10-18, 26-38, 120-132, 146-164, 178-192, 222-231, 428-438, 600-618, 625-633, 646-679
masliyrqlL TNSYSVDLhd eieqiGSEKT QNVTINPSpf aqtryapvnw ghgeindstt vepildgpyq pttftppndy wilinsntng vvyestnnsd fwtavvaiep hvnpvdrqyT IFGESKQFNV SNdsnkwkfl emfrsSSQNE FYNRRTLTSD TRFVgilkyg grvwtfhGET PRATTDSSST ANlnnisiti hsefyiiprs qeskcneyin nGLPPIQNTR Nvvplplssr siqykraqvn ediivsktsl wkemqynrdi iirfkfgnsi vkmgglgykw seisykaany qynylrdgeq vtahttcsvn gvnnfsyngg slptdfgisr yevikensyv yvdywddska frnmvyvrsl aanlnsvkct ggsynfsipv gawpvmngga vslhfagvtl stqftdfvsl nslrfrfSLT VDEPPFSIlr trtvnlyglp aanpnngney yeisgrfsli ylvptnddyq tpimnsvtvr qdlerqltdl reefnslsqe iamaqlidla llpldmfsmf sgikstidlt ksmatsvmkk frksklatsi semtnslsda assasrnvsi rsnlsaisnw tnvsndvsnV TNSLNDISTQ TSTISKKFrl kemiTQTEGM SFDdisaavl ktkidMSTQI GKNTLPDIVT EASEKFIPKR SYRILKDDEv meintegkff aykintfdev pfdvnkfael vtdspvisai idfktlknln dnygitrtea lnliksnpnm lrnfinqnnp iirnrieqli lqckl
>P11193_REM465
181-189, 565-578
masliyrqll tnsysvdlhd eieqigsekt qnvtinpspf aqtryapvnw ghgeindstt vepildgpyq pttftppndy wilinsntng vvyestnnsd fwtavvaiep hvnpvdrqyt ifgeskqfnv sndsnkwkfl emfrsssqne fynrrtltsd trfvgilkyg grvwtfhget PRATTDSSSt anlnnisiti hsefyiiprs qeskcneyin nglppiqntr nvvplplssr siqykraqvn ediivsktsl wkemqynrdi iirfkfgnsi vkmgglgykw seisykaany qynylrdgeq vtahttcsvn gvnnfsyngg slptdfgisr yevikensyv yvdywddska frnmvyvrsl aanlnsvkct ggsynfsipv gawpvmngga vslhfagvtl stqftdfvsl nslrfrfslt vdeppfsilr trtvnlyglp aanpnngney yeisgrfsli ylvptnddyq tpimnsvtvr qdlerqltdl reefnslsqe iamaqlidla llpldmfsmf sgikstidlt ksmatsvmkk frksklatsi semtNSLSDA ASSASRNVsi rsnlsaisnw tnvsndvsnv tnslndistq tstiskkfrl kemitqtegm sfddisaavl ktkidmstqi gkntlpdivt easekfipkr syrilkddev meintegkff aykintfdev pfdvnkfael vtdspvisai idfktlknln dnygitrtea lnliksnpnm lrnfinqnnp iirnrieqli lqckl
| JOB-ID | P11193_203041ZzkA8X8AAQEAACQmobYAAABN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P11193 |
| Description | sp|P11193|VP4_ROTHW Outer capsid protein VP4 OS=Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8]) OX=10962 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 775 |
| Download predictions | smoothed scores raw scores |