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>P11224_LOOPS
10-20, 26-39, 67-102, 110-124, 156-201, 208-225, 241-265, 271-279, 286-315, 325-354, 372-464, 474-544, 557-575, 582-592, 613-656, 662-783, 827-868, 877-900, 906-950, 1101-1200, 1210-1220, 1254-1263, 1288-1312
mlfvfilflP SCLGYIGDFR ciqlvNSNGA NVSAPSISTe tvevsqglgt yyvldrvyln atllltGYYP VDGSKFRNLA LRGTNSVSLS WFQPPYLNQF NDgifakvqN LKTSTPSGAT AYFPtivigs lfgytsytvv iepyngvima svcqyTICQL PYTDCKPNTN GNKLIGFWHT DVKPPICVLK RNFTLNVNAD AfyfhfyQHG GTFYAYYADK PSATTflfsv yigdiltqyy VLPFICNPTA GSTFAPRYWV TPLVKrqylf NFNQKGVITs avdcaSSYTS EIKCKTQSML PSTGVYELSG YTVQPvgvvy rrvaNLPACN IEEWLTARSV PSPLNWERKT FQNCnfnlss llryvqaesl fCNNIDASKV YGRCFGSISV DKFAVPRSRQ VDLQLGNSGF LQTANYKIDT AATSCQLHYT LPKNNVTINN HNPSSWNRRY GFNDAGVFGK NQHDvvyaqq cftVRSSYCP CAQPDIVSPC TTQTKPKSAF VNVGDHCEGL GVLEDNCGNA DPHKGCICAN NSFIGWSHDT CLVNdrcqif anillnGINS GTTCSTDLQL PNTEVvtgic vKYDLYGITG QGvfkevkad yynswqtlly dvNGNLNGFR DLTTNKTYTI RSCYSGRVSA AFHKDAPEPA LLYRNIncsy vFSNNISREE NPLNYFDSYL GCVVNADNRT DEALPNCDLR MGAGLCVDYS KSRRAHRSVS TGYRLTTFEP YTPMLVNDSV QSVDGLYEMQ IPTNFTIGHH EEFIQTRSPK VTIDCAAFVC GDNtacrqql veygsfcvnv nailnevnnl ldnmqlqvas almqgvTISS RLPDGISGPI DDINFSPLLG CIGSTCAEDG NGPSAIRGrs aiedllFDKV KLSDVGFVEA YNNCTGGQEV rdllcVQSFN GIKVLPPVLS ESQISGYTTG ATAAAMFPPW SAAAGVPFSL svqyringlg vtmnvlsenq kmiasafnna lgaiqdgfda tnsalgkiqs vvnanaealn nllnqlsnrf gaisaslqei ltrleaveak aqidrlingr ltalnayisk qlsdstlikv saaqaiekvn ecvksqttri nfcgngnhil SLVQNAPYGL YFIHFSYVPI SFTTANVSPG LCISGDRGLA PKAGYFVQDD GEWKFTGSSY YYPEPITDKN SVIMSSCAVN YTKAPEVFLN TSIPNPPDFK eeldkwfknQ TSIAPDLSLD feklnvtlld ltyemnriqd aikklnesyi nlkEVGTYEM YVKwpwyvwl liglagvavc vllfficCCT GCGSCCFKKC GNCCDEYGGH QDsivihnis shed
>P11224_HOTLOOPS
705-735, 1212-1221
mlfvfilflp sclgyigdfr ciqlvnsnga nvsapsiste tvevsqglgt yyvldrvyln atllltgyyp vdgskfrnla lrgtnsvsls wfqppylnqf ndgifakvqn lktstpsgat ayfptivigs lfgytsytvv iepyngvima svcqyticql pytdckpntn gnkligfwht dvkppicvlk rnftlnvnad afyfhfyqhg gtfyayyadk psattflfsv yigdiltqyy vlpficnpta gstfaprywv tplvkrqylf nfnqkgvits avdcassyts eikcktqsml pstgvyelsg ytvqpvgvvy rrvanlpacn ieewltarsv psplnwerkt fqncnfnlss llryvqaesl fcnnidaskv ygrcfgsisv dkfavprsrq vdlqlgnsgf lqtanykidt aatscqlhyt lpknnvtinn hnpsswnrry gfndagvfgk nqhdvvyaqq cftvrssycp caqpdivspc ttqtkpksaf vnvgdhcegl gvledncgna dphkgcican nsfigwshdt clvndrcqif anillngins gttcstdlql pntevvtgic vkydlygitg qgvfkevkad yynswqtlly dvngnlngfr dlttnktyti rscysgrvsa afhkdapepa llyrnincsy vfsnnisree nplnyfdsyl gcvvnadnrt dealpncdlr mgagLCVDYS KSRRAHRSVS TGYRLTTFEP YTPMLvndsv qsvdglyemq iptnftighh eefiqtrspk vtidcaafvc gdntacrqql veygsfcvnv nailnevnnl ldnmqlqvas almqgvtiss rlpdgisgpi ddinfspllg cigstcaedg ngpsairgrs aiedllfdkv klsdvgfvea ynnctggqev rdllcvqsfn gikvlppvls esqisgyttg ataaamfppw saaagvpfsl svqyringlg vtmnvlsenq kmiasafnna lgaiqdgfda tnsalgkiqs vvnanaealn nllnqlsnrf gaisaslqei ltrleaveak aqidrlingr ltalnayisk qlsdstlikv saaqaiekvn ecvksqttri nfcgngnhil slvqnapygl yfihfsyvpi sfttanvspg lcisgdrgla pkagyfvqdd gewkftgssy yypepitdkn svimsscavn ytkapevfln tsipnppdfk eeldkwfknq tSIAPDLSLD Feklnvtlld ltyemnriqd aikklnesyi nlkevgtyem yvkwpwyvwl liglagvavc vllfficcct gcgsccfkkc gnccdeyggh qdsivihnis shed
>P11224_REM465
712-720
mlfvfilflp sclgyigdfr ciqlvnsnga nvsapsiste tvevsqglgt yyvldrvyln atllltgyyp vdgskfrnla lrgtnsvsls wfqppylnqf ndgifakvqn lktstpsgat ayfptivigs lfgytsytvv iepyngvima svcqyticql pytdckpntn gnkligfwht dvkppicvlk rnftlnvnad afyfhfyqhg gtfyayyadk psattflfsv yigdiltqyy vlpficnpta gstfaprywv tplvkrqylf nfnqkgvits avdcassyts eikcktqsml pstgvyelsg ytvqpvgvvy rrvanlpacn ieewltarsv psplnwerkt fqncnfnlss llryvqaesl fcnnidaskv ygrcfgsisv dkfavprsrq vdlqlgnsgf lqtanykidt aatscqlhyt lpknnvtinn hnpsswnrry gfndagvfgk nqhdvvyaqq cftvrssycp caqpdivspc ttqtkpksaf vnvgdhcegl gvledncgna dphkgcican nsfigwshdt clvndrcqif anillngins gttcstdlql pntevvtgic vkydlygitg qgvfkevkad yynswqtlly dvngnlngfr dlttnktyti rscysgrvsa afhkdapepa llyrnincsy vfsnnisree nplnyfdsyl gcvvnadnrt dealpncdlr mgaglcvdys kSRRAHRSVS tgyrlttfep ytpmlvndsv qsvdglyemq iptnftighh eefiqtrspk vtidcaafvc gdntacrqql veygsfcvnv nailnevnnl ldnmqlqvas almqgvtiss rlpdgisgpi ddinfspllg cigstcaedg ngpsairgrs aiedllfdkv klsdvgfvea ynnctggqev rdllcvqsfn gikvlppvls esqisgyttg ataaamfppw saaagvpfsl svqyringlg vtmnvlsenq kmiasafnna lgaiqdgfda tnsalgkiqs vvnanaealn nllnqlsnrf gaisaslqei ltrleaveak aqidrlingr ltalnayisk qlsdstlikv saaqaiekvn ecvksqttri nfcgngnhil slvqnapygl yfihfsyvpi sfttanvspg lcisgdrgla pkagyfvqdd gewkftgssy yypepitdkn svimsscavn ytkapevfln tsipnppdfk eeldkwfknq tsiapdlsld feklnvtlld ltyemnriqd aikklnesyi nlkevgtyem yvkwpwyvwl liglagvavc vllfficcct gcgsccfkkc gnccdeyggh qdsivihnis shed
| JOB-ID | P11224_172015Zum6T38AAQEAADCTt4oAAABX |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P11224 |
| Description | sp|P11224|SPIKE_CVMA5 Spike glycoprotein OS=Murine coronavirus (strain A59) OX=11142 GN=S PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1324 |
| Download predictions | smoothed scores raw scores |