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>P11225_LOOPS
11-20, 26-51, 67-103, 110-146, 155-203, 209-225, 234-266, 293-351, 369-421, 427-456, 468-503, 524-567, 573-694, 738-779, 788-811, 817-861, 1012-1083, 1091-1110, 1121-1132, 1165-1174, 1199-1223
mlfvfilllp SCLGYIGDFR ciqtvNYNGN NASAPSISTE AVDVSKGRGT Yyvldrvyln atllltGYYP VDGSNYRNLA LTGTNTLSLT WFKPPFLSEF NDGifakvqN LKTNTPTGAT SYFPTIVIGS LFGNTSYTVV LEPYNNiima svctYTICQL PYTPCKPNTN GNRVIGFWHT DVKPPICLLK RNFTFNVNAP WLYfhfyqQG GTFYAYYADK PSATTflfsv yigDILTQYF VLPFICTPTA GSTLAPLYWV TPLLKRqylf nfnekgvits avdcassyis eiKCKTQSLL PSTGVYDLSG YTVQPVGVVY RRVPNLPDCK IEEWLTAKSV PSPLNWERRT Fqncnfnlss llryvqaeSL SCNNIDASKV YGMCFGSVSV DKFAIPRSRQ IDLQIGNSGF LQTANYKIDT AatscqLYYS LPKNNVTINN YNPSSWNRRY GFKVNDrcqi fanillnGIN SGTTCSTDLQ LPNTEVATGV CVRYDLYGIT GQGvfkevka dyynswqall ydvNGNLNGF RDLTTNKTYT IRSCYSGRVS AAYHKEAPEP ALLYRNIncs yvFTNNISRE ENPLNYFDSY LGCVVNADNR TDEALPNCNL RMGAGLCVDY SKSRRARRSV STGYRLTTFE PYMPMLVNDS VQSVGGLYEM QIPTNFTIGH HEEFIQIRAP KVTIDCAAFV CGDNaacrqq lveygsfcdn vnailnevnn lldnmqlqva salmqgvTIS SRLPDGISGP IDDINFSPLL GCIGSTCAED GNGPSAIRGr saiedllFDK VKLSDVGFVE AYNNCTGGQE VrdllcVQSF NGIKVLPPVL SESQISGYTA GATAAAMFPP WTAAAGVPFS Lnvqyringl gvtmnvlsen qkmiasafnn algaiqegfd atnsalgkiq svvnanaeal nnllnqlsnr fgaisaslqe iltrldavea kaqidrling rltalnayis kqlsdstlik fsaaqaiekv necvksqttr infcgngnhi lSLVQNAPYG LCFIHFSYVP TSFKTANVSP GLCISGDRGL APKAGYFVQD NGEWKFTGSN YYYPEPITDK NSVamiscav NYTKAPEVFL NNSIPNLPDF keeldkwfkn QTSIAPDLSL DFeklnvtfl dltyemnriq daikklnesy inlkEVGTYE MYVKwpwyvw lliglagvav cvllfficCC TGCGSCCFRK CGSCCDEYGG HQDsivihni sahed
>P11225_HOTLOOPS
27-38, 327-345, 611-645, 1123-1132
mlfvfilllp sclgyigdfr ciqtvnYNGN NASAPSISte avdvskgrgt yyvldrvyln atllltgyyp vdgsnyrnla ltgtntlslt wfkppflsef ndgifakvqn lktntptgat syfptivigs lfgntsytvv lepynniima svctyticql pytpckpntn gnrvigfwht dvkppicllk rnftfnvnap wlyfhfyqqg gtfyayyadk psattflfsv yigdiltqyf vlpfictpta gstlaplywv tpllkrqylf nfnekgvits avdcassyis eikcktqsll pstgvydlsg ytvqpvgvvy rrvpnlPDCK IEEWLTAKSV PSPLNwerrt fqncnfnlss llryvqaesl scnnidaskv ygmcfgsvsv dkfaiprsrq idlqignsgf lqtanykidt aatscqlyys lpknnvtinn ynpsswnrry gfkvndrcqi fanillngin sgttcstdlq lpntevatgv cvrydlygit gqgvfkevka dyynswqall ydvngnlngf rdlttnktyt irscysgrvs aayhkeapep allyrnincs yvftnnisre enplnyfdsy lgcvvnadnr tdealpncnl RMGAGLCVDY SKSRRARRSV STGYRLTTFE PYMPMlvnds vqsvgglyem qiptnftigh heefiqirap kvtidcaafv cgdnaacrqq lveygsfcdn vnailnevnn lldnmqlqva salmqgvtis srlpdgisgp iddinfspll gcigstcaed gngpsairgr saiedllfdk vklsdvgfve aynnctggqe vrdllcvqsf ngikvlppvl sesqisgyta gataaamfpp wtaaagvpfs lnvqyringl gvtmnvlsen qkmiasafnn algaiqegfd atnsalgkiq svvnanaeal nnllnqlsnr fgaisaslqe iltrldavea kaqidrling rltalnayis kqlsdstlik fsaaqaiekv necvksqttr infcgngnhi lslvqnapyg lcfihfsyvp tsfktanvsp glcisgdrgl apkagyfvqd ngewkftgsn yyypepitdk nsvamiscav nytkapevfl nnsipnlpdf keeldkwfkn qtSIAPDLSL DFeklnvtfl dltyemnriq daikklnesy inlkevgtye myvkwpwyvw lliglagvav cvllfficcc tgcgsccfrk cgsccdeygg hqdsivihni sahed
>P11225_REM465
623-631
mlfvfilllp sclgyigdfr ciqtvnyngn nasapsiste avdvskgrgt yyvldrvyln atllltgyyp vdgsnyrnla ltgtntlslt wfkppflsef ndgifakvqn lktntptgat syfptivigs lfgntsytvv lepynniima svctyticql pytpckpntn gnrvigfwht dvkppicllk rnftfnvnap wlyfhfyqqg gtfyayyadk psattflfsv yigdiltqyf vlpfictpta gstlaplywv tpllkrqylf nfnekgvits avdcassyis eikcktqsll pstgvydlsg ytvqpvgvvy rrvpnlpdck ieewltaksv psplnwerrt fqncnfnlss llryvqaesl scnnidaskv ygmcfgsvsv dkfaiprsrq idlqignsgf lqtanykidt aatscqlyys lpknnvtinn ynpsswnrry gfkvndrcqi fanillngin sgttcstdlq lpntevatgv cvrydlygit gqgvfkevka dyynswqall ydvngnlngf rdlttnktyt irscysgrvs aayhkeapep allyrnincs yvftnnisre enplnyfdsy lgcvvnadnr tdealpncnl rmgaglcvdy skSRRARRSV Stgyrlttfe pympmlvnds vqsvgglyem qiptnftigh heefiqirap kvtidcaafv cgdnaacrqq lveygsfcdn vnailnevnn lldnmqlqva salmqgvtis srlpdgisgp iddinfspll gcigstcaed gngpsairgr saiedllfdk vklsdvgfve aynnctggqe vrdllcvqsf ngikvlppvl sesqisgyta gataaamfpp wtaaagvpfs lnvqyringl gvtmnvlsen qkmiasafnn algaiqegfd atnsalgkiq svvnanaeal nnllnqlsnr fgaisaslqe iltrldavea kaqidrling rltalnayis kqlsdstlik fsaaqaiekv necvksqttr infcgngnhi lslvqnapyg lcfihfsyvp tsfktanvsp glcisgdrgl apkagyfvqd ngewkftgsn yyypepitdk nsvamiscav nytkapevfl nnsipnlpdf keeldkwfkn qtsiapdlsl dfeklnvtfl dltyemnriq daikklnesy inlkevgtye myvkwpwyvw lliglagvav cvllfficcc tgcgsccfrk cgsccdeygg hqdsivihni sahed
| JOB-ID | P11225_050005ZukM1X8AAQEAADCSHNoAAAAO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P11225 |
| Description | sp|P11225|SPIKE_CVMJH Spike glycoprotein OS=Murine coronavirus (strain JHM) OX=11144 GN=S PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1235 |
| Download predictions | smoothed scores raw scores |