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>P12482_LOOPS
1-12, 37-110, 125-135, 147-171, 177-220, 229-240
MGGAISKKQY KRggnlrerl lqargetygr lwegleEGYS QSLGASGKGL SSLSCEPQKY SEGQYMNTPW RNPATERAKL GYRQQNMDDV DDEDDDLIGV SVHPRVPLRA mtyklaidms hfikEKGGLE GIYYNerrhr ildmylEKEE GIIPDWQNYT SGPGIRYPMH YgwlwkLVPV DVSDEAQEDE THCLVHPAQT YQWDDPWGEV LAWKFDPELA ysykafikYP EEFGSKSGLS eeevkrrlta rgllkmadkk ets
>P12482_HOTLOOPS
1-18, 61-72, 98-108, 232-243, 248-263
MGGAISKKQY KRGGNLRErl lqargetygr lwegleegys qslgasgkgl sslscepqky SEGQYMNTPW RNpaterakl gyrqqnmddv ddedddlIGV SVHPRVPLra mtyklaidms hfikekggle giyynerrhr ildmylekee giipdwqnyt sgpgirypmh ygwlwklvpv dvsdeaqede thclvhpaqt yqwddpwgev lawkfdpela ysykafikyp eEFGSKSGLS EEEvkrrLTA RGLLKMADKK ETS
>P12482_REM465
1-8, 43-54, 256-263
MGGAISKKqy krggnlrerl lqargetygr lwegleegys qsLGASGKGL SSLScepqky segqymntpw rnpaterakl gyrqqnmddv ddedddligv svhprvplra mtyklaidms hfikekggle giyynerrhr ildmylekee giipdwqnyt sgpgirypmh ygwlwklvpv dvsdeaqede thclvhpaqt yqwddpwgev lawkfdpela ysykafikyp eefgsksgls eeevkrrlta rgllkMADKK ETS
| JOB-ID | P12482_142101Zt8ETX8AAQEAABRfIPYAAABN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P12482 |
| Description | sp|P12482|NEF_SIVS4 Protein Nef OS=Simian immunodeficiency virus (isolate F236/smH4) OX=11737 GN=nef PE=1 SV=4 |
| Title/ID | none |
| Sequence length | 263 |
| Download predictions | smoothed scores raw scores |