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>P12490_LOOPS
42-63, 69-82, 113-155, 173-275, 288-310, 354-410
mrakgtrkny qhlwrwgtml lgmlmicsaa eqlwvtvyyg vPVWKEATTT LFCASDAKAY DTEvhnvwAT HACVPTDPNP QEvvlqnvte nfnmwknntv eqmhediisl wdQSLKPCVK STPLCVTLNC TDLTNATYAN GSSEERGEIR NCSFNvttii rnkiqkeyal fyRLDIVPID KDNTSYTLIN CNTSVITQAC PKVSFEPIPI HYCAPAGFAI LKCNDKKFNG TGPCTNVSTV QCTHGIKPVV STQLLLNGSL AEGEVVIRSE NFTNNaktii vqlnksvEIN CTRPNNNTKK GIAIGPGRTL yarekiigdi rqahcniska kwndtlkqiv tklkeqfrnk tivFNQSSGG DPEIVMHSFN CGGEFFYCKT TQLFNSTWLF NSTWNDTERS DNNETIIIPC rikqiinsgr k
>P12490_HOTLOOPS
1-12, 138-152, 265-275, 285-307, 353-363, 397-421
MRAKGTRKNY QHlwrwgtml lgmlmicsaa eqlwvtvyyg vpvwkeattt lfcasdakay dtevhnvwat hacvptdpnp qevvlqnvte nfnmwknntv eqmhediisl wdqslkpcvk stplcvtlnc tdltnatYAN GSSEERGEIR NCsfnvttii rnkiqkeyal fyrldivpid kdntsytlin cntsvitqac pkvsfepipi hycapagfai lkcndkkfng tgpctnvstv qcthgikpvv stqlllngsl aegeVVIRSE NFTNNaktii vqlnKSVEIN CTRPNNNTKK GIAIGPGrtl yarekiigdi rqahcniska kwndtlkqiv tklkeqfrnk tiVFNQSSGG DPEivmhsfn cggeffyckt tqlfnstwlf nstwndTERS DNNETIIIPC RIKQIINSGR K
>P12490_REM465
1-9
MRAKGTRKNy qhlwrwgtml lgmlmicsaa eqlwvtvyyg vpvwkeattt lfcasdakay dtevhnvwat hacvptdpnp qevvlqnvte nfnmwknntv eqmhediisl wdqslkpcvk stplcvtlnc tdltnatyan gsseergeir ncsfnvttii rnkiqkeyal fyrldivpid kdntsytlin cntsvitqac pkvsfepipi hycapagfai lkcndkkfng tgpctnvstv qcthgikpvv stqlllngsl aegevvirse nftnnaktii vqlnksvein ctrpnnntkk giaigpgrtl yarekiigdi rqahcniska kwndtlkqiv tklkeqfrnk tivfnqssgg dpeivmhsfn cggeffyckt tqlfnstwlf nstwndters dnnetiiipc rikqiinsgr k
| JOB-ID | P12490_080205ZzhRfX8AAQEAACQmmuoAAABD |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P12490 |
| Description | sp|P12490|ENV_HV1N5 Truncated surface protein OS=Human immunodeficiency virus type 1 group M subtype B (isolate NY5) OX=11698 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 421 |
| Download predictions | smoothed scores raw scores |