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>P12495_LOOPS
1-29, 44-56, 121-150, 163-184, 212-241, 251-261, 278-295, 350-359, 382-426, 437-501
MGARASVLSG GKLDAWEKIR LRPGGKKKYr lkhlvwasre lerFALNPGL LETSDGckqi igqlqpairt gseelrslfn tvatlycvhe rievkdtkea lekmeeeqnk sknkkaqqaa ADAGNNSQVS QNYPIVQNLQ GQMVHQAISP rtlnawvkvi eeKAFSPEVI PMFSALSEGA TPQDlntmln tvgghqaamq mlketineea aEWDRLHPVH AGPIAPGQMR EPRGSDIAGT Tstlqeqiaw MTSNPPIPVG Eiykrwiilg lnkivrmYSP VSILDIRQGP KEPFRdyvdr fyktlraeqa sqevkgwmte tllvqnanpd cktilkalgp qatleemmtA CQGVGGPSHk arvlaeamsq atnsaaavmm qRGNFKGPRK TIKCFNCGKE GHIAKNCRAP RRKGCWKCGK EGHQLKdcte rqanflGKIW PSHKGRPGNF LQSRPEPTAP PAESFGFGEE ITPSQKQEQK DKELYPSTAL KSLFGNDPLL Q
>P12495_HOTLOOPS
1-31, 283-293, 395-412, 473-501
MGARASVLSG GKLDAWEKIR LRPGGKKKYR Lkhlvwasre lerfalnpgl letsdgckqi igqlqpairt gseelrslfn tvatlycvhe rievkdtkea lekmeeeqnk sknkkaqqaa adagnnsqvs qnypivqnlq gqmvhqaisp rtlnawvkvi eekafspevi pmfsalsega tpqdlntmln tvgghqaamq mlketineea aewdrlhpvh agpiapgqmr eprgsdiagt tstlqeqiaw mtsnppipvg eiykrwiilg lnkivrmysp vsILDIRQGP KEPfrdyvdr fyktlraeqa sqevkgwmte tllvqnanpd cktilkalgp qatleemmta cqgvggpshk arvlaeamsq atnsaaavmm qrgnfkgprk tikcFNCGKE GHIAKNCRAP RRkgcwkcgk eghqlkdcte rqanflgkiw pshkgrpgnf lqsrpeptap paesfgfgee itPSQKQEQK DKELYPSTAL KSLFGNDPLL Q
>P12495_REM465
1-9, 102-127, 472-483
MGARASVLSg gkldawekir lrpggkkkyr lkhlvwasre lerfalnpgl letsdgckqi igqlqpairt gseelrslfn tvatlycvhe rievkdtkea lEKMEEEQNK SKNKKAQQAA ADAGNNSqvs qnypivqnlq gqmvhqaisp rtlnawvkvi eekafspevi pmfsalsega tpqdlntmln tvgghqaamq mlketineea aewdrlhpvh agpiapgqmr eprgsdiagt tstlqeqiaw mtsnppipvg eiykrwiilg lnkivrmysp vsildirqgp kepfrdyvdr fyktlraeqa sqevkgwmte tllvqnanpd cktilkalgp qatleemmta cqgvggpshk arvlaeamsq atnsaaavmm qrgnfkgprk tikcfncgke ghiakncrap rrkgcwkcgk eghqlkdcte rqanflgkiw pshkgrpgnf lqsrpeptap paesfgfgee iTPSQKQEQK DKElypstal kslfgndpll q
| JOB-ID | P12495_212940Zze9RH8AAQEAAGkXNEUAAABE |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P12495 |
| Description | sp|P12495|GAG_HV1Z2 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) OX=11683 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 501 |
| Download predictions | smoothed scores raw scores |