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>P12871_LOOPS
7-29, 48-114, 119-151, 162-174, 195-210, 216-266, 272-286, 312-332, 370-384
mvskaaRRRR AAPRQQQRQQ SNRASNQPRr rrarrtrrqq rmaatnnMLK MSAPGLDFLK CAFASPDFST DPGKGIPDKF QGLVLPKKHC LTQSITFTPG KQTMLLVAPI PGIAclkaEA NVGASFSGVP LASVEFPGFD QLFGTSATDT Aanvtafrya sMAAGVYPTS NLMQfagsiq vykiplkqvl nsysQTVATV PPTNLAQNTI aidglEALDA LPNNNYSGSF IEGCYSQSVC NEPEFEFHPI MEGYASVPPA NVTNAQasmf tNLTFSGARY TGLGDMdaia ilvttptgav ntavlkvwac vEYRPNPNST LYEFARESPA NDeyalaayr kiardipiav ackdnatfwe rvrsilksgL NFASTIPGPV GVAAtgikgi ietigslwv
>P12871_HOTLOOPS
1-38, 43-53
MVSKAARRRR AAPRQQQRQQ SNRASNQPRR RRARRTRRqq rmAATNNMLK MSApgldflk cafaspdfst dpgkgipdkf qglvlpkkhc ltqsitftpg kqtmllvapi pgiaclkaea nvgasfsgvp lasvefpgfd qlfgtsatdt aanvtafrya smaagvypts nlmqfagsiq vykiplkqvl nsysqtvatv pptnlaqnti aidglealda lpnnnysgsf iegcysqsvc nepefefhpi megyasvppa nvtnaqasmf tnltfsgary tglgdmdaia ilvttptgav ntavlkvwac veyrpnpnst lyefarespa ndeyalaayr kiardipiav ackdnatfwe rvrsilksgl nfastipgpv gvaatgikgi ietigslwv
>P12871_REM465
1-40
MVSKAARRRR AAPRQQQRQQ SNRASNQPRR RRARRTRRQQ rmaatnnmlk msapgldflk cafaspdfst dpgkgipdkf qglvlpkkhc ltqsitftpg kqtmllvapi pgiaclkaea nvgasfsgvp lasvefpgfd qlfgtsatdt aanvtafrya smaagvypts nlmqfagsiq vykiplkqvl nsysqtvatv pptnlaqnti aidglealda lpnnnysgsf iegcysqsvc nepefefhpi megyasvppa nvtnaqasmf tnltfsgary tglgdmdaia ilvttptgav ntavlkvwac veyrpnpnst lyefarespa ndeyalaayr kiardipiav ackdnatfwe rvrsilksgl nfastipgpv gvaatgikgi ietigslwv
| JOB-ID | P12871_085213ZulDPX8AAQEAADCTmr4AAABI |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P12871 |
| Description | sp|P12871|CAPSD_NODAM Capsid protein alpha OS=Nodamura virus (strain Mag115) OX=914672 GN=alpha PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 399 |
| Download predictions | smoothed scores raw scores |