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>P13899_LOOPS
1-21, 29-95, 101-131, 160-174, 180-199, 226-243, 253-270, 276-368, 379-417, 422-454, 461-490, 540-555, 567-597, 605-621, 626-773, 790-876, 887-928, 940-984, 994-1023, 1046-1073, 1086-1093, 1110-1118, 1137-1144, 1153-1162, 1172-1201, 1223-1232, 1291-1303, 1311-1318, 1330-1351, 1358-1369, 1378-1444, 1449-1480, 1513-1522, 1586-1601, 1627-1637, 1646-1662, 1688-1712, 1717-1744, 1758-1816, 1836-1889, 1897-1910, 1937-1982, 2012-2026, 2034-2083, 2157-2183, 2189-2218, 2227-2237, 2265-2288
MACKHGYPDV CPICTAVDVT PgfeylllAD GEWFPTDLLC VDLDDDVFWP SNSSNQSETM EWTDLPLVRD IVMEPQGNAS SSDKSNSQSS GNEGViinnf YSNQYQNSID LSASGGNAGD APQNNGQLSN Ilggaanafa tmapllldqn teemenlsdR VASDKAGNSA TNTQstvgrL CGYGEAHHGE HPASCADTAt dkvlaaeryy tidlaswttt qeafsHIRIP LPHVLAGEDG GVFgatlrrh ylCKTGWRVQ VQCNASQFHA gsllvFMAPE FYTGKGTKTG DMEPTDPFTM DTTWRAPQGA PTGYRYDSRT GFFAMNHQNQ WQWTVYPHQI LNLRTNTTVD LEVPYVNIAP TSSWTQHAnw tlvvavfsPL QYASGSSSDV QITASIQPVN PVFNGLRHET VIAQSPIavt vREHKGCFYS TNPDTTVPIY GKTISTPNDY MCGEfsdlle LCKLPTFLGN PNSNNKRYPY FSATNSVPTT slvdyqvals cscmcnsmla avarnfnqyr gslnflfvft gaamvkgkfL IAYTPPGAGK PTTRDqamqa tyaiwdLGLN SSFVFTAPFI SPTHYRQTSY TSATIASvdg wvtvWQLTPL TYPSGAPVNS DiltlVSAGD DFTLRMPISP TKWAPQGSDN AEKGKVSNDD ASVDFVAEPV KLPENQTRVA FFYDRAVPIG MLRPGQNIES TFVYQENDLR LNCLLLTPLP SFCPDSTSGP VKTKAPVQWR WVRSGGTTNF PLMTKQDYAF LCFSPFTYYK CDLevtvsal gtdtvasvlR WAPTGAPADV TDQLIGYTPS LGETRNPHMW LVGAGNTQIS FVVPYNSPLS VLPAAWFNGW SDFGNTKDFG VAPNADFGRL WIQGNTsasv rirykkMKVF CPRPTLFFPW PVSTRSKINA DNPVPILELE NPAAFYRIdl fitfidefiT FDYKVHGRPV LTFRIPGFGL TPAGRMLVCM GEKPAHGPFT SSRSlyhvif tatCSSFSFS IYKGRYRSWK KPIHDELVDR GYTtfgeffr avrayhadyy kqrliHDVEM NPGPVQSVFQ PQGAVLTKSL APQagiqnll lrllgIDGDC SEVskaitvv tdlfaawerA KTTLVSPEfw sklilkttkf iaasvlYLHN PDFTttvcls lmTGVDLLTN DSvfdwlknk lSSFFRTPPP VCPNVLQPQG PLREANEGFT Fakniewamk tiqsivnwlt swFKQEEDHP QSkldkflme fpdhcrnimd mrngrkayce ctasfkyfde lynlavtckr iplaslcekf KNRHDHSVTR PEPvvvvlrg AAGQGKSVts qiiaqsvskM AFGRQSVYSM PPDSEYFDGY EnqfsviMDD LGQNPDGEDf tvfcqmvSST NFLPNMAHLE RKGTPFTSSF IVATTNLPKF RPVTVAHYPA VDRRITFDFT VTAGPHCTTS NGMLdiekAF DEIPGSKPQL ACFSADCPLL HKRGVMFTCN rtkavynlqq vvkmvndtit rktenvkkmn slVAQSPPDW EHfeniltcl rqnnaalqdq ldelqeafaq arersdflsd wlkvsaiifa giaslsavik laskfKESIW PSPVRVELSE Geqaayagra raqkqalqvl diqgggKVLA QAGNPVMdfe lfcakNMVAP ITFYYPDKAE VTqsclllra hlfvvnrhva etewtafKLK DVRHERDTVV TRSVNRSGAE TDltfiKVTK GPLFKDNVNK FCSNKDDFPA RNDAvtgimn tglafvySGN FLIGNQPVNT TTGACFNHCL HYRAQTRRGW CGSAVICNVN GKKAVYGMHS AGGGGLaaat iitrelieaa eksmlALEPQ GAIVDISTGS VVHVPRKTKL RRTVAHDVFQ PKFEPAVLSR YDPRTDKDVd vvafskHTTN MESLPPVFDI vcdeyanrvf tilgkdngll tveqavLGLP GMDPMEKDTS PGLPYTQQGL RRTDLLNFNT AKMTPQLDYA HSklvlgvyd dvvyqsflkd eirplekihe aKTRIVDVPP FAHCIWgrql lgrFASKFQT KPGLELGSAI GTDPDVDWTP YAAELSGFNY VYDVDYSNFD ASHstamfec liknffteqn gfdrriaeyl rslavsrhay edrrvlirgg llsgcaatsm lntimnnvii raalylTYSN FEFDDIKVLS YGDDLLIGTN YQIdfnlvKE RLAPFGYKIT PANKTTTFPL TSHLQDVTfl krrfvrFNSY LFRPQMDavn lkamvsyckp gtlkeklmsi allaVHSGPD IYDEIFLPFR NVGIVVPTys smlyrwlslf r
>P13899_HOTLOOPS
1-12, 51-62, 78-91, 160-174, 299-310, 427-439, 639-653, 668-679, 722-741, 793-803, 895-914, 1110-1121, 1173-1182, 1292-1302, 1404-1413, 1681-1727, 1841-1855, 1860-1885, 1896-1907, 1922-1929, 2010-2020, 2045-2056, 2201-2218, 2231-2239
MACKHGYPDV CPictavdvt pgfeylllad gewfptdllc vdldddvfwp SNSSNQSETM EWtdlplvrd ivmepqgNAS SSDKSNSQSS Gnegviinnf ysnqyqnsid lsasggnagd apqnngqlsn ilggaanafa tmapllldqn teemenlsdR VASDKAGNSA TNTQstvgrl cgygeahhge hpascadtat dkvlaaeryy tidlaswttt qeafshirip lphvlagedg gvfgatlrrh ylcktgwrvq vqcnasqfha gsllvfmape fytgkgtktg dmeptdpfTM DTTWRAPQGA ptgyrydsrt gffamnhqnq wqwtvyphqi lnlrtnttvd levpyvniap tsswtqhanw tlvvavfspl qyasgsssdv qitasiqpvn pvfnglrhet viaqspiavt vrehkgCFYS TNPDTTVPIy gktistpndy mcgefsdlle lcklptflgn pnsnnkrypy fsatnsvptt slvdyqvals cscmcnsmla avarnfnqyr gslnflfvft gaamvkgkfl iaytppgagk pttrdqamqa tyaiwdlgln ssfvftapfi spthyrqtsy tsatiasvdg wvtvwqltpl typsgapvns diltlvsagd dftlrmpiSP TKWAPQGSDN AEKgkvsndd asvdfvaEPV KLPENQTRVa ffydravpig mlrpgqnies tfvyqendlr lncllltplp sFCPDSTSGP VKTKAPVQWR Wvrsggttnf plmtkqdyaf lcfspftyyk cdlevtvsal gtdtvasvlr waPTGAPADV TDQligytps lgetrnphmw lvgagntqis fvvpynspls vlpaawfngw sdfgntkdfg vapnadfgrl wiqgntsasv rirykkmkvf cprpTLFFPW PVSTRSKINA DNPVpilele npaafyridl fitfidefit fdykvhgrpv ltfripgfgl tpagrmlvcm gekpahgpft ssrslyhvif tatcssfsfs iykgryrswk kpihdelvdr gyttfgeffr avrayhadyy kqrlihdvem npgpvqsvfq pqgavltksl apqagiqnll lrllgidgdc sevskaitvv tdlfaawerA KTTLVSPEFW Sklilkttkf iaasvlylhn pdftttvcls lmtgvdlltn dsvfdwlknk lsSFFRTPPP VCpnvlqpqg plreanegft fakniewamk tiqsivnwlt swfkqeedhp qskldkflme fpdhcrnimd mrngrkayce ctasfkyfde lynlavtckr iplaslcekf kNRHDHSVTR PEpvvvvlrg aagqgksvts qiiaqsvskm afgrqsvysm ppdseyfdgy enqfsvimdd lgqnpdgedf tvfcqmvsst nflpnmahle rkgtpftssf ivaTTNLPKF RPVtvahypa vdrritfdft vtagphctts ngmldiekaf deipgskpql acfsadcpll hkrgvmftcn rtkavynlqq vvkmvndtit rktenvkkmn slvaqsppdw ehfeniltcl rqnnaalqdq ldelqeafaq arersdflsd wlkvsaiifa giaslsavik laskfkesiw pspvrvelse geqaayagra raqkqalqvl diqgggkvla qagnpvmdfe lfcaknmvap itfyypdkae vtqsclllra hlfvvnrhva ETEWTAFKLK DVRHERDTVV TRSVNRSGAE TDLTFIKVTK GPLFKDNvnk fcsnkddfpa rndavtgimn tglafvysgn flignqpvnt ttgacfnhcl hyraqtrrgw cgsavicnvn gkkavygmhs agggglaaat iitrelieaa eksmlalepq GAIVDISTGS VVHVPrktkL RRTVAHDVFQ PKFEPAVLSR YDPRTdkdvd vvafsKHTTN MESLPPVfdi vcdeyanrvf tILGKDNGLl tveqavlglp gmdpmekdts pglpytqqgl rrtdllnfnt akmtpqldya hsklvlgvyd dvvyqsflkd eirplekihE AKTRIVDVPP fahciwgrql lgrfaskfqt kpglELGSAI GTDPDVdwtp yaaelsgfny vydvdysnfd ashstamfec liknffteqn gfdrriaeyl rslavsrhay edrrvlirgg llsgcaatsm lntimnnvii raalyltysn fefddikvls ygddlligtn yqidfnlvke rlapfgykit PANKTTTFPL TSHLQDVTfl krrfvrfnsy LFRPQMDAVn lkamvsyckp gtlkeklmsi allavhsgpd iydeiflpfr nvgivvptys smlyrwlslf r
>P13899_REM465
77-91, 644-657, 726-734
mackhgypdv cpictavdvt pgfeylllad gewfptdllc vdldddvfwp snssnqsetm ewtdlplvrd ivmepqGNAS SSDKSNSQSS Gnegviinnf ysnqyqnsid lsasggnagd apqnngqlsn ilggaanafa tmapllldqn teemenlsdr vasdkagnsa tntqstvgrl cgygeahhge hpascadtat dkvlaaeryy tidlaswttt qeafshirip lphvlagedg gvfgatlrrh ylcktgwrvq vqcnasqfha gsllvfmape fytgkgtktg dmeptdpftm dttwrapqga ptgyrydsrt gffamnhqnq wqwtvyphqi lnlrtnttvd levpyvniap tsswtqhanw tlvvavfspl qyasgsssdv qitasiqpvn pvfnglrhet viaqspiavt vrehkgcfys tnpdttvpiy gktistpndy mcgefsdlle lcklptflgn pnsnnkrypy fsatnsvptt slvdyqvals cscmcnsmla avarnfnqyr gslnflfvft gaamvkgkfl iaytppgagk pttrdqamqa tyaiwdlgln ssfvftapfi spthyrqtsy tsatiasvdg wvtvwqltpl typsgapvns diltlvsagd dftlrmpisp tkwAPQGSDN AEKGKVSndd asvdfvaepv klpenqtrva ffydravpig mlrpgqnies tfvyqendlr lncllltplp sfcpdSTSGP VKTKapvqwr wvrsggttnf plmtkqdyaf lcfspftyyk cdlevtvsal gtdtvasvlr waptgapadv tdqligytps lgetrnphmw lvgagntqis fvvpynspls vlpaawfngw sdfgntkdfg vapnadfgrl wiqgntsasv rirykkmkvf cprptlffpw pvstrskina dnpvpilele npaafyridl fitfidefit fdykvhgrpv ltfripgfgl tpagrmlvcm gekpahgpft ssrslyhvif tatcssfsfs iykgryrswk kpihdelvdr gyttfgeffr avrayhadyy kqrlihdvem npgpvqsvfq pqgavltksl apqagiqnll lrllgidgdc sevskaitvv tdlfaawera kttlvspefw sklilkttkf iaasvlylhn pdftttvcls lmtgvdlltn dsvfdwlknk lssffrtppp vcpnvlqpqg plreanegft fakniewamk tiqsivnwlt swfkqeedhp qskldkflme fpdhcrnimd mrngrkayce ctasfkyfde lynlavtckr iplaslcekf knrhdhsvtr pepvvvvlrg aagqgksvts qiiaqsvskm afgrqsvysm ppdseyfdgy enqfsvimdd lgqnpdgedf tvfcqmvsst nflpnmahle rkgtpftssf ivattnlpkf rpvtvahypa vdrritfdft vtagphctts ngmldiekaf deipgskpql acfsadcpll hkrgvmftcn rtkavynlqq vvkmvndtit rktenvkkmn slvaqsppdw ehfeniltcl rqnnaalqdq ldelqeafaq arersdflsd wlkvsaiifa giaslsavik laskfkesiw pspvrvelse geqaayagra raqkqalqvl diqgggkvla qagnpvmdfe lfcaknmvap itfyypdkae vtqsclllra hlfvvnrhva etewtafklk dvrherdtvv trsvnrsgae tdltfikvtk gplfkdnvnk fcsnkddfpa rndavtgimn tglafvysgn flignqpvnt ttgacfnhcl hyraqtrrgw cgsavicnvn gkkavygmhs agggglaaat iitrelieaa eksmlalepq gaivdistgs vvhvprktkl rrtvahdvfq pkfepavlsr ydprtdkdvd vvafskhttn meslppvfdi vcdeyanrvf tilgkdngll tveqavlglp gmdpmekdts pglpytqqgl rrtdllnfnt akmtpqldya hsklvlgvyd dvvyqsflkd eirplekihe aktrivdvpp fahciwgrql lgrfaskfqt kpglelgsai gtdpdvdwtp yaaelsgfny vydvdysnfd ashstamfec liknffteqn gfdrriaeyl rslavsrhay edrrvlirgg llsgcaatsm lntimnnvii raalyltysn fefddikvls ygddlligtn yqidfnlvke rlapfgykit panktttfpl tshlqdvtfl krrfvrfnsy lfrpqmdavn lkamvsyckp gtlkeklmsi allavhsgpd iydeiflpfr nvgivvptys smlyrwlslf r
| JOB-ID | P13899_134134Zt77Dn8AAQEAABRfH-YAAABG |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P13899 |
| Description | sp|P13899|POLG_TMEVD Genome polyprotein OS=Theiler's murine encephalomyelitis virus (strain DA) OX=12126 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 2301 |
| Download predictions | smoothed scores raw scores |