Download PostScript file
>P13900_LOOPS
1-56, 63-95, 105-129, 140-175, 180-191, 196-218, 225-234, 241-309, 316-392, 399-423, 460-478, 486-506, 513-539, 553-573, 585-632, 645-657, 692-778, 789-801, 806-866, 874-888, 895-945, 952-970, 975-997, 1012-1020, 1075-1084, 1093-1105, 1150-1157, 1163-1175, 1216-1237, 1251-1268, 1277-1288, 1294-1337, 1355-1398, 1415-1450, 1470-1480, 1516-1541, 1558-1568, 1573-1609, 1646-1691, 1698-1708, 1721-1774, 1809-1845, 1869-1878, 1918-1948, 1954-1965, 1979-2017, 2038-2062, 2071-2093, 2103-2135, 2166-2174
MGAQVSTQKT GAHETSLSAA GNSVIHYTNI NYYKDAASNS ANRQDFTQDP GKFTEPvkdi mvKSMPALNS PSAEECGYSD RVRSITLGNS TITTQecanv vvgyGVWPTY LKDEEATAED QPTQPDVATc rfytlesvmW QQSSPGWWWK FPDALSNMGL FGQNMQYHYL GRAGYtihvQ CNASKFHQGC LlvvcVPEAE MGCATLANKP DPKSLSKGei anmfESQNST GETAvqanvi NAGMGVGVGN LTIFPHQWIN LRTNNSATIV MPYINSVPMD NMFRHNNFTL MVIPFAPLSY STGATTYVPi tvtvaPMCAE YNGLRLAGKQ GLPTLSTPGS NQFLTSDDFQ SPSAMPQFDV TPEMDIPGQV NNLMEIAEVD SVVPVNNTEG KVmsieayQI PVQSNPTNGS QVFGFPLTPG ANSvlnrtll geilnyyahw sgsikltfmf cgsamatgkF LLAYSPPGAG APTTRKEAml gthviWDVGL QSSCVLCIPW ISQTHYryvv mdEYTAGGYI TCWYQTNIVV PADAQSDCKi lcfvsacndf svRMLKDTPF IKQDNFFQGP PGEvmgraia rvadTIGSGP VNSESIPALT AAETGHTSQV VPSDTMQTRH VKNYHSRSES TVenflcrsa cvfyTTYKNH DSDGDNFayw vintrqvaql rrklemftya rfdleltfvi tSTQEQPTVR GQDAPVLTHQ IMYVPPGGPV PTKVNSYSWQ TSTNPSVFWT EGSAPPRMSI PFIGIGNAYS MFYDGWARFD KQGTYGIStl nnmgtlymRH VNDGGPGPIV StvriYFKPK HVKTWVPRPP RLCQYQKAGN VNFEPTGVTE GRTDITTMKT TGAFGQQSGA VYVGNYrvvn rhlATRADWQ NCVWEDYNrd llvsTTTAHG CDTIARCDCT AGVYFCASRN KHYPVTFEGP GLVEVQESEY YPKKYqshvl lAAGFAEPGD CGGILRCQHG vigiVTVGGE GVVGFADVRD LLWLEDDame qgvrdyveql gNCFGSGFTN qiceqvtllk esligqdsil ekslkalvki vsalvivvrn hddlitvtat laliGCTTSP WRWLkqkvsq yyGIPMAERQ NSGWLkkfte mtnackgmew iaikiqkfie wlkvkilpev kekheflnrL KQLPLLEsqi atIEQSAPSQ SDQEQlfsnv qyfahycrky aplyaaeakr vfslekkmsn yiqfkSKCRI EPVCLLLHGS PGAGKSVatn ligrslaekl NSSVYSLPPD PDHFDGYKqq avvimdDLCQ NPDGKDVSlf cqmVSSVDFV PPMAALEEKG ILFTSPFVLA STNAGSVNAP TVSDSRAlvr rfhfdmniev vsmySQNGKI NMPMAVKTCD EECCPVNFKK CCPLVCGKAI QFIDRRTQvr ysldmlvtem freyNHRHSV GATLEALFQG PPVYREIKIS VAPETPPPPA vadllksvds eavreyckeK GWLIPEVDST lqiekhvnra ficlqalttf vsvagiiyii yklfaGFQGA YTGMPNQKPR VPTLRQAKVQ Gpafefavam mkrnastVKT EYGEFTMLgi ydRWAVLPRH AKPGPTILMN DQVVGVLDAK ELVDKDGTNl eltllklnrn ekfrdirgfl areevevnea vlainTSKFP NMYIPVGRVT DYGFLNLGGT PTKRMLMYNF PTRAGQCGGV LmstgkvLGI HVGGNGHQgf saallrhyfn EEQGEIEFIE SSKDAGFPVI NTPSKTKLEP SVFHHVFEGN KEPAVLRNGD PRLKanfeea ifskyignvn thvdeymmea vdhyagqlAT LDISTEPMKL EDAVYGTEGL EALDLTTSAG YPYVAlgikk rdilskktrd ltklkecmDK YGLNLPMVty vkdelrsadk vakgksrlie asslndsvam rqtfgnlYKT FHLNPGIVTG SAVGCDPDVF WSKIPVMLdg hliAFDYSGY DASLSpvwft clklllekLG YTNKETNYID YLCNSHHLYR DKHYFVRGGM PSGCSGTsif nsminniiir tlmlkvyKGI DLDQFRMIAY GDDVIASYPW PIdasllaea GKDYGLIMTP ADKGECFNEV TWTnvtflkr yfRADEQYPF LVHPVMPMKD IHESIRWTKD PKNTQdhvrs lcllawhnge heyeefirki rsvrvGRCLS LPAFstlrrk wldsf
>P13900_HOTLOOPS
1-21, 89-99, 115-126, 207-215, 602-618, 624-634, 691-702, 811-841, 850-861, 1075-1083, 1096-1105, 1322-1335, 1390-1399, 1601-1623, 1644-1655, 1757-1768, 1844-1877, 1898-1908, 2161-2185
MGAQVSTQKT GAHETSLSAA Gnsvihytni nyykdaasns anrqdftqdp gkftepvkdi mvksmpalns psaeecgysd rvrsitlgNS TITTQECANv vvgygvwpty lkdeEATAED QPTQPDvatc rfytlesvmw qqsspgwwwk fpdalsnmgl fgqnmqyhyl gragytihvq cnaskfhqgc llvvcvpeae mgcatlANKP DPKSLskgei anmfesqnst getavqanvi nagmgvgvgn ltifphqwin lrtnnsativ mpyinsvpmd nmfrhnnftl mvipfaplsy stgattyvpi tvtvapmcae ynglrlagkq glptlstpgs nqfltsddfq spsampqfdv tpemdipgqv nnlmeiaevd svvpvnnteg kvmsieayqi pvqsnptngs qvfgfpltpg ansvlnrtll geilnyyahw sgsikltfmf cgsamatgkf llaysppgag apttrkeaml gthviwdvgl qsscvlcipw isqthyryvv mdeytaggyi tcwyqtnivv padaqsdcki lcfvsacndf svrmlkdtpf ikqdnffqgp pgevmgraia rvadtigsgp vnsesipalt aAETGHTSQV VPSDTMQTrh vknYHSRSES TVENflcrsa cvfyttyknh dsdgdnfayw vintrqvaql rrklemftya rfdleltfvi TSTQEQPTVR GQdapvlthq imyvppggpv ptkvnsyswq tstnpsvfwt egsapprmsi pfigignays mfydgwarfd kqgtygistl nnmgtlymrh vndggpgpiv stvriyfkpk HVKTWVPRPP RLCQYQKAGN VNFEPTGVTE GrtdittmkT TGAFGQQSGA Vyvgnyrvvn rhlatradwq ncvwedynrd llvstttahg cdtiarcdct agvyfcasrn khypvtfegp glvevqesey ypkkyqshvl laagfaepgd cggilrcqhg vigivtvgge gvvgfadvrd llwleddame qgvrdyveql gncfgsgftn qiceqvtllk esligqdsil ekslkalvki vsalvivvrn hddlitvtat laliGCTTSP WRWlkqkvsq yygipMAERQ NSGWLkkfte mtnackgmew iaikiqkfie wlkvkilpev kekheflnrl kqlpllesqi atieqsapsq sdqeqlfsnv qyfahycrky aplyaaeakr vfslekkmsn yiqfkskcri epvclllhgs pgagksvatn ligrslaekl nssvyslppd pdhfdgykqq avvimddlcq npdgkdvslf cqmvssvdfv ppmaaleekg ilftspfvla sTNAGSVNAP TVSDSralvr rfhfdmniev vsmysqngki nmpmavktcd eeccpvnfkk ccplvcgkaI QFIDRRTQVr ysldmlvtem freynhrhsv gatlealfqg ppvyreikis vapetppppa vadllksvds eavreyckek gwlipevdst lqiekhvnra ficlqalttf vsvagiiyii yklfagfqga ytgmpnqkpr vptlrqakvq gpafefavam mkrnastvkt eygeftmlgi ydrwavlprh akpgptilmn dqvvgvldak ELVDKDGTNL ELTLLKLNRN EKFrdirgfl areevevnea vlaINTSKFP NMYIPvgrvt dygflnlggt ptkrmlmynf ptragqcggv lmstgkvlgi hvggnghqgf saallrhyfn eeqgeiefie sskdagfpvi ntpsktklep svfhhvFEGN KEPAVLRNgd prlkanfeea ifskyignvn thvdeymmea vdhyagqlat ldistepmkl edavygtegl ealdlttsag ypyVALGIKK RDILSKKTRD LTKLKECMDK YGLNLPMvty vkdelrsadk vakgksrLIE ASSLNDSVam rqtfgnlykt fhlnpgivtg savgcdpdvf wskipvmldg hliafdysgy daslspvwft clkllleklg ytnketnyid ylcnshhlyr dkhyfvrggm psgcsgtsif nsminniiir tlmlkvykgi dldqfrmiay gddviasypw pidasllaea gkdyglimtp adkgecfnev twtnvtflkr yfradeqypf lvhpvmpmkd ihesirwtkd pkntqdhvrs lcllawhnge heyeefirki RSVRVGRCLS LPAFSTLRRK WLDSF
>P13900_REM465
1-16, 116-123, 602-610, 619-631, 1164-1173
MGAQVSTQKT GAHETSlsaa gnsvihytni nyykdaasns anrqdftqdp gkftepvkdi mvksmpalns psaeecgysd rvrsitlgns tittqecanv vvgygvwpty lkdeeATAED QPTqpdvatc rfytlesvmw qqsspgwwwk fpdalsnmgl fgqnmqyhyl gragytihvq cnaskfhqgc llvvcvpeae mgcatlankp dpkslskgei anmfesqnst getavqanvi nagmgvgvgn ltifphqwin lrtnnsativ mpyinsvpmd nmfrhnnftl mvipfaplsy stgattyvpi tvtvapmcae ynglrlagkq glptlstpgs nqfltsddfq spsampqfdv tpemdipgqv nnlmeiaevd svvpvnnteg kvmsieayqi pvqsnptngs qvfgfpltpg ansvlnrtll geilnyyahw sgsikltfmf cgsamatgkf llaysppgag apttrkeaml gthviwdvgl qsscvlcipw isqthyryvv mdeytaggyi tcwyqtnivv padaqsdcki lcfvsacndf svrmlkdtpf ikqdnffqgp pgevmgraia rvadtigsgp vnsesipalt aAETGHTSQV vpsdtmqtRH VKNYHSRSES Tvenflcrsa cvfyttyknh dsdgdnfayw vintrqvaql rrklemftya rfdleltfvi tstqeqptvr gqdapvlthq imyvppggpv ptkvnsyswq tstnpsvfwt egsapprmsi pfigignays mfydgwarfd kqgtygistl nnmgtlymrh vndggpgpiv stvriyfkpk hvktwvprpp rlcqyqkagn vnfeptgvte grtdittmkt tgafgqqsga vyvgnyrvvn rhlatradwq ncvwedynrd llvstttahg cdtiarcdct agvyfcasrn khypvtfegp glvevqesey ypkkyqshvl laagfaepgd cggilrcqhg vigivtvgge gvvgfadvrd llwleddame qgvrdyveql gncfgsgftn qiceqvtllk esligqdsil ekslkalvki vsalvivvrn hddlitvtat laligcttsp wrwlkqkvsq yygipmaerq nsgwlkkfte mtnackgmew iaikiqkfie wlkvkilpev kekheflnrl kqlpllesqi atiEQSAPSQ SDQeqlfsnv qyfahycrky aplyaaeakr vfslekkmsn yiqfkskcri epvclllhgs pgagksvatn ligrslaekl nssvyslppd pdhfdgykqq avvimddlcq npdgkdvslf cqmvssvdfv ppmaaleekg ilftspfvla stnagsvnap tvsdsralvr rfhfdmniev vsmysqngki nmpmavktcd eeccpvnfkk ccplvcgkai qfidrrtqvr ysldmlvtem freynhrhsv gatlealfqg ppvyreikis vapetppppa vadllksvds eavreyckek gwlipevdst lqiekhvnra ficlqalttf vsvagiiyii yklfagfqga ytgmpnqkpr vptlrqakvq gpafefavam mkrnastvkt eygeftmlgi ydrwavlprh akpgptilmn dqvvgvldak elvdkdgtnl eltllklnrn ekfrdirgfl areevevnea vlaintskfp nmyipvgrvt dygflnlggt ptkrmlmynf ptragqcggv lmstgkvlgi hvggnghqgf saallrhyfn eeqgeiefie sskdagfpvi ntpsktklep svfhhvfegn kepavlrngd prlkanfeea ifskyignvn thvdeymmea vdhyagqlat ldistepmkl edavygtegl ealdlttsag ypyvalgikk rdilskktrd ltklkecmdk yglnlpmvty vkdelrsadk vakgksrlie asslndsvam rqtfgnlykt fhlnpgivtg savgcdpdvf wskipvmldg hliafdysgy daslspvwft clkllleklg ytnketnyid ylcnshhlyr dkhyfvrggm psgcsgtsif nsminniiir tlmlkvykgi dldqfrmiay gddviasypw pidasllaea gkdyglimtp adkgecfnev twtnvtflkr yfradeqypf lvhpvmpmkd ihesirwtkd pkntqdhvrs lcllawhnge heyeefirki rsvrvgrcls lpafstlrrk wldsf
| JOB-ID | P13900_084347ZulBQ38AAQEAADCSKOUAAAAG |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P13900 |
| Description | sp|P13900|POLG_SVDVU Genome polyprotein OS=Swine vesicular disease virus (strain UKG/27/72) OX=12077 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 2185 |
| Download predictions | smoothed scores raw scores |