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>P13901_LOOPS
43-81, 135-203, 213-223, 231-250, 275-339, 356-440, 454-463, 476-574, 579-617, 627-634, 641-665, 679-694, 706-716, 726-762, 772-788, 818-836, 893-904, 915-930, 937-948, 1119-1129, 1181-1194, 1227-1238, 1250-1274, 1282-1306, 1312-1337, 1349-1367, 1422-1431, 1437-1450, 1480-1520, 1533-1541, 1551-1568, 1580-1590, 1605-1618, 1641-1657, 1663-1674, 1679-1698, 1752-1786, 1792-1807, 1831-1881, 1889-1911, 1919-1928, 1936-1963, 1975-1993, 2003-2014, 2030-2044, 2114-2134, 2143-2151
mnmsrqgifq tvgsgldhil sladieeeqm iqsvdrtavt gaSYFTSVDQ SSVHTAEVGS HQVEPLRTSV DKPGSKKTQG Ekfflihsad wltthalfhe vakldvvkll yneqfavqgl lryhtyarfg ieiqVQINPT PFQQGGLICA MVPGDQSYGS IASLTVYPHG LLNCNINNVV RIKVPFIYTR GAYHFKDPQY PVWeltirvw seLNIGTGTS AYTslnvlar FTDLELHGLT PLSTQMMRNE frvsttenvv nlsnyedara kmsfALDQED WKSDPSQGGG IKITHFTTWT SIPTLAAQFP FNASDSVGQQ IKVIPVDPYF FQMTNTNPDq kcitalasic qmfcfWRGDL VFDFQVFPTK YHSGRLLFCF VPGNELIDVS GITLKQATTA PCAVMDITGV QSTLRFRVPW ISDTPYRVNR YTKSAHQKGE ytaigklivy cynRLTSPSN VAShvrvnvy lsainLECFA PLYHAMDVTT QVGDDSGGFS TTVSTEQNVP DPQVGITTMK DLKGKANRGK MDVSGVQAPV GAITTIEDPV LAKKVPETFP ELKPGESRHT SDHMsiykFM GRSHFLCTFT FNSNNKEYTF PITLSSTSNP PHGLPSTlrw ffnlfqLYRG PLDLtiiiig ATDVDGMAWF TPVGLAVDTP WVEKEsalsi dyktalgaVR FNTRRTGNIQ IRLPwysyly avsgaLDGLG DKTDSTfglv siqiaNYNHS DEYLSFSCYL SVTEQSEFYF PRAPLNSNAM LStesmmsri aAGDLESSVD DPRSEEDKrf eshiecrkpy kelrlevgkq rlkyaqeELS NEVLPPPRKK KGLFSQakis lfyteeheim kfswrgvtad tralrrfgfs laagrsvwtl emdagvltgr liRLNDEKWT EMKDdkivsl iekfTSNKYW SKVNFPHGML dleeiaANSK DFPNMSETdl cfllhwlnpk kinladrmlg lsgvqeikeq gvgliaecrt fldsiagtlk smmfgfhhsv tveiintvlc fvksgillyv mqqlnqdehs hiigllrvmn yvdigcsvis cgkvfskmle tvfnwqmdsr mmelrtqsfs nwlrdicsgi tifknfkdai ywlytklnDF YEVNYGKKKd ilnilkdnqq kiekaieead kfsilqiqdv ekfeqyqkgv dliqklrtvh SMAQVDPNLM VHLSplrdci arvhqklknl gsinqamvtr cepvvcYLYG KRGGGKSLts ialatkickH YGVEPEKNIY TKPVASDYWD GYSGqlvcii dDIGQNTTDE DWSDFCQLVS GCPLRLnmas lEEKGRHFSS PFIIATSNWS NPSPKTVyvk eaidrrlhFK VEVNPASFSK NPHNDMLnvn laktndaikd mscvdlimdg hnvslmdlls slvmtveirk qnmtafmelw sQGISDDDND SamaefFQSF PSGEPSNSKL sgffqsvtnh kwvavgaavg ilgvlvggwF VYKHFSRKEE EPIPAEGVYH GVTKPKQVIK LDADPVESQS tleiaglvrk nlVQFGVGEK Ngcvrwvmna LGVKDDWLLV PSHAYKFEkd yemmefyfnR GGTYYSISAG nvviqsldvg fqdvVLMKVP TIPKFRDItq hfikkgdvpr alnrlatlvt TVNGTPMLIS EGPLKMEeka tyVHKKNDGT TVDLtvdqAW RGKGEGLPGM CGGALVSSnq siqnailgih vaggnsilva klvtqemfqn idkkiesqri mkveftqcsm nVVSKTLFRK SPIHHHIDKT MINFPAAMPF SKAEIDpmam mLSKYSLPIV EEPEDYKeas ifyqnkivgk tqlvddfldl DMAITGAPGI DAINMDSSPG FPYVQERLTK RDLIWLDENG LLLGVHPRLA QrilfntvMM ENCSDLDVVF TTCPKDELRP LekvleskTR AIDACPLDyt ilcrmYWGPA ISYFHLNPGF HTGVAIGIDP DCQwdelfkt mirfGDVGLD LDFSAFDASL SPFmireagr imSELSGTPS HFGTalmnti iyskhllynC CYHVCGSMPS GSPCtallns iinnvnlyyv fskifgkspv ffcqalkilc ygddvlivfs rdvqidnldl igqkivdefk klgMTATSAD KNVPQLKPVS ELTFlkrsfn lvEDRIRPAI Sektiwslia wqrsnaefeq nlenaqwfaf mhgyefyqkf yyfvqsclek emieyrlksy dwwrmrfydq cficdls
>P13901_HOTLOOPS
55-77, 409-442, 503-516, 532-553, 558-571, 674-693, 774-802, 817-834, 869-905, 914-923, 1210-1219, 1252-1261, 1324-1335, 1354-1366, 1490-1502, 1551-1560, 1622-1631, 1638-1654, 1662-1673, 1910-1927, 2115-2151
mnmsrqgifq tvgsgldhil sladieeeqm iqsvdrtavt gasyftsvdq ssvhTAEVGS HQVEPLRTSV DKPGSKKtqg ekfflihsad wltthalfhe vakldvvkll yneqfavqgl lryhtyarfg ieiqvqinpt pfqqgglica mvpgdqsygs iasltvyphg llncninnvv rikvpfiytr gayhfkdpqy pvweltirvw selnigtgts aytslnvlar ftdlelhglt plstqmmrne frvsttenvv nlsnyedara kmsfaldqed wksdpsqggg ikithfttwt siptlaaqfp fnasdsvgqq ikvipvdpyf fqmtntnpdq kcitalasic qmfcfwrgdl vfdfqvfptk yhsgrllfcf vpgnelidvs gitlkqatta pcavmditGV QSTLRFRVPW ISDTPYRVNR YTKSAHQKGE YTaigklivy cynrltspsn vashvrvnvy lsainlecfa plyhamdvtt qvgddsggfs ttVSTEQNVP DPQVGIttmk dlkgkanrgk mDVSGVQAPV GAITTIEDPV LAKkvpeTFP ELKPGESRHT Sdhmsiykfm grshflctft fnsnnkeytf pitlsstsnp phglpstlrw ffnlfqlyrg pldltiiiig atdvdgmawf tpvglavdtp wvekesalsi dykTALGAVR FNTRRTGNIQ IRLpwysyly avsgaldglg dktdstfglv siqianynhs deylsfscyl svteqsefyf praplnsnam lstesmmsri aagDLESSVD DPRSEEDKRF ESHIECRKPY KElrlevgkq rlkyaqEELS NEVLPPPRKK KGLFsqakis lfyteeheim kfswrgvtad tralrrfgFS LAAGRSVWTL EMDAGVLTGR LIRLNDEKWT EMKDDkivsl iekFTSNKYW SKVnfphgml dleeiaansk dfpnmsetdl cfllhwlnpk kinladrmlg lsgvqeikeq gvgliaecrt fldsiagtlk smmfgfhhsv tveiintvlc fvksgillyv mqqlnqdehs hiigllrvmn yvdigcsvis cgkvfskmle tvfnwqmdsr mmelrtqsfs nwlrdicsgi tifknfkdai ywlytklndf yevnygkkkd ilnilkdnqq kiekaieead kfsilqiqdv ekfeqyqkgv dliqklrtvh smaqvdpnlm vhlsplrdci arvhqklknL GSINQAMVTr cepvvcylyg krgggkslts ialatkickh yGVEPEKNIY Tkpvasdywd gysgqlvcii ddigqnttde dwsdfcqlvs gcplrlnmas leekgrhfss pfiIATSNWS NPSPKtvyvk eaidrrlhfk vevNPASFSK NPHNDMlnvn laktndaikd mscvdlimdg hnvslmdlls slvmtveirk qnmtafmelw sqgisdddnd samaeffqsf psgepsnskl sgffqsvtnh kwvavgaavg ilgvlvggwf vykhfsrkeE EPIPAEGVYH GVtkpkqvik ldadpvesqs tleiaglvrk nlvqfgvgek ngcvrwvmna LGVKDDWLLV pshaykfekd yemmefyfnr ggtyysisag nvviqsldvg fqdvvlmkvp tipkfrditq hFIKKGDVPR AlnrlatLVT TVNGTPMLIS EGPLkmeeka tYVHKKNDGT TVDltvdqaw rgkgeglpgm cggalvssnq siqnailgih vaggnsilva klvtqemfqn idkkiesqri mkveftqcsm nvvsktlfrk spihhhidkt minfpaampf skaeidpmam mlskyslpiv eepedykeas ifyqnkivgk tqlvddfldl dmaitgapgi dainmdsspg fpyvqerltk rdliwldeng lllgvhprla qrilfntvmm encsdldvvf ttcpkdelrP LEKVLESKTR AIDACPLdyt ilcrmywgpa isyfhlnpgf htgvaigidp dcqwdelfkt mirfgdvgld ldfsafdasl spfmireagr imselsgtps hfgtalmnti iyskhllync cyhvcgsmps gspctallns iinnvnlyyv fskifgkspv ffcqalkilc ygddvlivfs rdvqidnldl igqkivdefk klgmTATSAD KNVPQLKPVS ELTFLKRSFN LVEDRIRPAI Sektiwslia wqrsnaefeq nlenaqwfaf mhgyefyqkf yyfvqsclek emieyrlksy dwwrmrfydq cficdls
>P13901_REM465
775-792
mnmsrqgifq tvgsgldhil sladieeeqm iqsvdrtavt gasyftsvdq ssvhtaevgs hqveplrtsv dkpgskktqg ekfflihsad wltthalfhe vakldvvkll yneqfavqgl lryhtyarfg ieiqvqinpt pfqqgglica mvpgdqsygs iasltvyphg llncninnvv rikvpfiytr gayhfkdpqy pvweltirvw selnigtgts aytslnvlar ftdlelhglt plstqmmrne frvsttenvv nlsnyedara kmsfaldqed wksdpsqggg ikithfttwt siptlaaqfp fnasdsvgqq ikvipvdpyf fqmtntnpdq kcitalasic qmfcfwrgdl vfdfqvfptk yhsgrllfcf vpgnelidvs gitlkqatta pcavmditgv qstlrfrvpw isdtpyrvnr ytksahqkge ytaigklivy cynrltspsn vashvrvnvy lsainlecfa plyhamdvtt qvgddsggfs ttvsteqnvp dpqvgittmk dlkgkanrgk mdvsgvqapv gaittiedpv lakkvpetfp elkpgesrht sdhmsiykfm grshflctft fnsnnkeytf pitlsstsnp phglpstlrw ffnlfqlyrg pldltiiiig atdvdgmawf tpvglavdtp wvekesalsi dyktalgavr fntrrtgniq irlpwysyly avsgaldglg dktdstfglv siqianynhs deylsfscyl svteqsefyf praplnsnam lstesmmsri aagdLESSVD DPRSEEDKRF EShiecrkpy kelrlevgkq rlkyaqeels nevlppprkk kglfsqakis lfyteeheim kfswrgvtad tralrrfgfs laagrsvwtl emdagvltgr lirlndekwt emkddkivsl iekftsnkyw skvnfphgml dleeiaansk dfpnmsetdl cfllhwlnpk kinladrmlg lsgvqeikeq gvgliaecrt fldsiagtlk smmfgfhhsv tveiintvlc fvksgillyv mqqlnqdehs hiigllrvmn yvdigcsvis cgkvfskmle tvfnwqmdsr mmelrtqsfs nwlrdicsgi tifknfkdai ywlytklndf yevnygkkkd ilnilkdnqq kiekaieead kfsilqiqdv ekfeqyqkgv dliqklrtvh smaqvdpnlm vhlsplrdci arvhqklknl gsinqamvtr cepvvcylyg krgggkslts ialatkickh ygvepekniy tkpvasdywd gysgqlvcii ddigqnttde dwsdfcqlvs gcplrlnmas leekgrhfss pfiiatsnws npspktvyvk eaidrrlhfk vevnpasfsk nphndmlnvn laktndaikd mscvdlimdg hnvslmdlls slvmtveirk qnmtafmelw sqgisdddnd samaeffqsf psgepsnskl sgffqsvtnh kwvavgaavg ilgvlvggwf vykhfsrkee epipaegvyh gvtkpkqvik ldadpvesqs tleiaglvrk nlvqfgvgek ngcvrwvmna lgvkddwllv pshaykfekd yemmefyfnr ggtyysisag nvviqsldvg fqdvvlmkvp tipkfrditq hfikkgdvpr alnrlatlvt tvngtpmlis egplkmeeka tyvhkkndgt tvdltvdqaw rgkgeglpgm cggalvssnq siqnailgih vaggnsilva klvtqemfqn idkkiesqri mkveftqcsm nvvsktlfrk spihhhidkt minfpaampf skaeidpmam mlskyslpiv eepedykeas ifyqnkivgk tqlvddfldl dmaitgapgi dainmdsspg fpyvqerltk rdliwldeng lllgvhprla qrilfntvmm encsdldvvf ttcpkdelrp lekvlesktr aidacpldyt ilcrmywgpa isyfhlnpgf htgvaigidp dcqwdelfkt mirfgdvgld ldfsafdasl spfmireagr imselsgtps hfgtalmnti iyskhllync cyhvcgsmps gspctallns iinnvnlyyv fskifgkspv ffcqalkilc ygddvlivfs rdvqidnldl igqkivdefk klgmtatsad knvpqlkpvs eltflkrsfn lvedrirpai sektiwslia wqrsnaefeq nlenaqwfaf mhgyefyqkf yyfvqsclek emieyrlksy dwwrmrfydq cficdls
| JOB-ID | P13901_143445Zt8HhX8AAQEAABRfIRcAAABR |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P13901 |
| Description | sp|P13901|POLG_HAVMB Genome polyprotein OS=Human hepatitis A virus genotype IB (isolate MBB) OX=12100 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 2227 |
| Download predictions | smoothed scores raw scores |