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>P15480_LOOPS
17-82, 89-127, 165-226, 278-305, 313-329, 336-348, 368-379, 386-397, 404-420, 431-443, 456-471, 524-548, 566-575, 586-654, 660-668, 677-689, 700-749, 794-811, 819-851, 865-904, 927-940, 951-959, 973-1012
mtnlqdqtqq ivpfirSLLM PTTGPASIPD DTLEKHTLRS ETSTYNLTVG DTGSGLIVFF PGFPGSIVGA HYTLQSNGNY KFdqmlltAQ NLPASYNYCR LVSRSLTVRS STLPGGVYAL NGTINAVtfq gslseltdvs ynglmsatan indkignvlv gegvTVLSLP TSYDLGYVRL GDPIPAIGLD PKMVATCDSS DRPRVYTITA ADDYQFSSQY QPGGVTitlf sanidaitsl svggelvfqt svhglvlgat iyligfdgtt vitravaANN GLTTGTDNLM PFNLVISTNE ITQPItsikl eiVTSKSGGQ AGDQMSWSAk gslavTIHGG NYPGALRPvt lvayervatg svvtvagVSN FELIPNPELa knlvtEYGRF DPGAMNYtkl ilsERDRLGI KTVWPTREYT dfreyfmeva DLNSPLKIAG AFGfkdiira irriaVPVVS TLFPPAAPLA Haigegvdyl lgdeaqaasg taraasgkar aasgrirqlt laadkgyevv anlFQVPQNP VVDGILASPG VLRGAHNLdc vlregatlfp vvittVEDAM TPKALnskmf aviegVREDL QPPSQRGSFI RTLSGHRVYG YAPDGVLPLE TGRDYTVVPI DDVWDDSIML SKDPIPPIVG NSGNlaiayM DVFRPKVPih vamtgaLNAC GEIEKVSFRs tklatahrlG LKLAGPGAFD VNTGPNWATF IKRFPHNPRD WDRLPYLNLP YLPPNAGRQy hlamaasefk etpelesavr ameaaanvdp lfqsalsvfm wleENGIVTD MANFALSDPN AhrmrnflAN APQAGSKSQR AKYGTAGYGV EARGPTPEEA Qrekdtrisk kmetMGIYFA TPEWVALNGH RGPSPGQLKY WQNTREIPDP NEDYldyvha eksrlaseeq ilraatSIYG APGQAEPPQA fidevakvye INHGRGPNQe qmkdllltam emKHRNPRRA LPKPKPKPNA PTQRPPGRLG RWIRTVSDED LE
>P15480_HOTLOOPS
280-288, 366-377, 400-414, 492-503, 567-574, 587-597, 820-831, 837-854, 952-959, 977-1012
mtnlqdqtqq ivpfirsllm pttgpasipd dtlekhtlrs etstynltvg dtgsglivff pgfpgsivga hytlqsngny kfdqmlltaq nlpasynycr lvsrsltvrs stlpggvyal ngtinavtfq gslseltdvs ynglmsatan indkignvlv gegvtvlslp tsydlgyvrl gdpipaigld pkmvatcdss drprvytita addyqfssqy qpggvtitlf sanidaitsl svggelvfqt svhglvlgat iyligfdgtt vitravaanN GLTTGTDNlm pfnlvistne itqpitsikl eivtsksggq agdqmswsak gslavtihgg nypgalrpvt lvayervatg svvtvAGVSN FELIPNPela knlvteygrf dpgamnytkL ILSERDRLGI KTVWptreyt dfreyfmeva dlnsplkiag afgfkdiira irriavpvvs tlfppaapla haigegvdyl lgdeaqaasg tARAASGKAR AASgrirqlt laadkgyevv anlfqvpqnp vvdgilaspg vlrgahnldc vlregatlfp vvittvEDAM TPKAlnskmf aviegvREDL QPPSQRGsfi rtlsghrvyg yapdgvlple tgrdytvvpi ddvwddsiml skdpippivg nsgnlaiaym dvfrpkvpih vamtgalnac geiekvsfrs tklatahrlg lklagpgafd vntgpnwatf ikrfphnprd wdrlpylnlp ylppnagrqy hlamaasefk etpelesavr ameaaanvdp lfqsalsvfm wleengivtd manfalsdpn ahrmrnflaN APQAGSKSQR AkygtaGYGV EARGPTPEEA QREKdtrisk kmetmgiyfa tpewvalngh rgpspgqlky wqntreipdp nedyldyvha eksrlaseeq ilraatsiyg apgqaeppqa fidevakvye iNHGRGPNQe qmkdllltam emkhrnPRRA LPKPKPKPNA PTQRPPGRLG RWIRTVSDED LE
>P15480_REM465
1-8, 316-328, 487-504, 822-856, 976-995
MTNLQDQTqq ivpfirsllm pttgpasipd dtlekhtlrs etstynltvg dtgsglivff pgfpgsivga hytlqsngny kfdqmlltaq nlpasynycr lvsrsltvrs stlpggvyal ngtinavtfq gslseltdvs ynglmsatan indkignvlv gegvtvlslp tsydlgyvrl gdpipaigld pkmvatcdss drprvytita addyqfssqy qpggvtitlf sanidaitsl svggelvfqt svhglvlgat iyligfdgtt vitravaann glttgtdnlm pfnlvistne itqpitsikl eivtsKSGGQ AGDQMSWSak gslavtihgg nypgalrpvt lvayervatg svvtvagvsn felipnpela knlvteygrf dpgamnytkl ilserdrlgi ktvwptreyt dfreyfmeva dlnsplkiag afgfkdiira irriavpvvs tlfppaapla haigegvdyl lgdeaqAASG TARAASGKAR AASGrirqlt laadkgyevv anlfqvpqnp vvdgilaspg vlrgahnldc vlregatlfp vvittvedam tpkalnskmf aviegvredl qppsqrgsfi rtlsghrvyg yapdgvlple tgrdytvvpi ddvwddsiml skdpippivg nsgnlaiaym dvfrpkvpih vamtgalnac geiekvsfrs tklatahrlg lklagpgafd vntgpnwatf ikrfphnprd wdrlpylnlp ylppnagrqy hlamaasefk etpelesavr ameaaanvdp lfqsalsvfm wleengivtd manfalsdpn ahrmrnflan aPQAGSKSQR AKYGTAGYGV EARGPTPEEA QREKDTrisk kmetmgiyfa tpewvalngh rgpspgqlky wqntreipdp nedyldyvha eksrlaseeq ilraatsiyg apgqaeppqa fidevakvye inhgrgpnqe qmkdllltam emkhrNPRRA LPKPKPKPNA PTQRPpgrlg rwirtvsded le
| JOB-ID | P15480_085431ZulDx38AAQEAADCTmsYAAABT |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P15480 |
| Description | sp|P15480|POLS_IBDVC Structural polyprotein OS=Avian infectious bursal disease virus (strain Cu-1) OX=10998 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1012 |
| Download predictions | smoothed scores raw scores |