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>P16087_LOOPS
18-33, 44-56, 71-80, 111-150, 162-169, 192-199, 214-231, 328-337, 346-353, 369-450
mgngqgrdwk maikrcsNVA VGVGGKSKKF GEGnfrwair manVSTGREP GDIPETldql rlvicdlqer REKFGSSKEI dmaivtlkvf avagllnmtv staaaaenmy SQMGLDTRPS MKEAGGKEEG PPQAYPIQTV NGVPQYVALD pkmvsifmek aREGLGGEEv qlwftafsan ltptdmatli mAAPGCAADk eildeslkql taeYDRTHPP DAPRPLPYFT Aaeimgiglt qeqqaearfa parmqcrawy lealgklaai kakspravql rqgakedyss fidrlfaqid qeqntaevkl ylkqslsian anadckkAMS HLKPESTlee klracQEIGS PGYkmqllae altkvqvvQS KGSGPVCFNC KKPGHLARQC REVKKCNKCG KPGHLAAKCW QGNRKNSGNW KAGRAAAPVN QMQQAVMPSA PPMEEKLLDL
>P16087_HOTLOOPS
1-36, 46-55, 72-83, 214-223, 432-450
MGNGQGRDWK MAIKRCSNVA VGVGGKSKKF GEGNFRwair manvsTGREP GDIPEtldql rlvicdlqer rEKFGSSKEI DMAivtlkvf avagllnmtv staaaaenmy sqmgldtrps mkeaggkeeg ppqaypiqtv ngvpqyvald pkmvsifmek areglggeev qlwftafsan ltptdmatli maapgcaadk eildeslkql taeYDRTHPP DAPrplpyft aaeimgiglt qeqqaearfa parmqcrawy lealgklaai kakspravql rqgakedyss fidrlfaqid qeqntaevkl ylkqslsian anadckkams hlkpestlee klracqeigs pgykmqllae altkvqvvqs kgsgpvcfnc kkpghlarqc revkkcnkcg kpghlaakcw qgnrknsgnw kagraaapvn qMQQAVMPSA PPMEEKLLDL
>P16087_REM465
1-8, 119-130, 272-283
MGNGQGRDwk maikrcsnva vgvggkskkf gegnfrwair manvstgrep gdipetldql rlvicdlqer rekfgsskei dmaivtlkvf avagllnmtv staaaaenmy sqmgldtrPS MKEAGGKEEG ppqaypiqtv ngvpqyvald pkmvsifmek areglggeev qlwftafsan ltptdmatli maapgcaadk eildeslkql taeydrthpp daprplpyft aaeimgiglt qeqqaearfa parmqcrawy lealgklaai kAKSPRAVQL RQGakedyss fidrlfaqid qeqntaevkl ylkqslsian anadckkams hlkpestlee klracqeigs pgykmqllae altkvqvvqs kgsgpvcfnc kkpghlarqc revkkcnkcg kpghlaakcw qgnrknsgnw kagraaapvn qmqqavmpsa ppmeeklldl
| JOB-ID | P16087_060146Z7q5yn8AAQEAAFgZeZgAAABO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P16087 |
| Description | sp|P16087|GAG_FIVPE Gag polyprotein OS=Feline immunodeficiency virus (isolate Petaluma) OX=11674 GN=gag PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 450 |
| Download predictions | smoothed scores raw scores |