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>P16088_LOOPS
1-81, 92-105, 114-122, 127-145, 159-184, 201-216, 240-260, 267-337, 343-350, 368-409, 420-427, 439-447, 470-478, 486-500, 537-552, 557-571, 587-601, 615-629, 645-652, 688-702, 715-726, 737-787, 821-842, 855-874, 885-915, 954-970, 979-993, 1011-1018, 1029-1041, 1074-1124
KEFGKLEGGA SCSPSESNAA SSNAICTSNG GETIGFVNYN KVGTTTTLEK RPEILIFVNG YPIKFLLDTG ADITILNRRD Fqvknsieng rQNMIGVGGG KRGTNyinvh leiRDENYKT QCifgnVCVL EDNSLIQPLL GRDNMikfni rlvmaqisDK IPVVKVKMKD PNKGPQIKQW PLTNekieal teiverleke GKVKRADSNN PWNTPVfaik kksgkwrmli dfrelnkltE KGAEVQLGLP HPAGLQIKKQ vtvldiGDAY FTIPLDPDYA PYTAFTLPRK NNAGPGRRFV WCSLPQGWIL SPLIYQSTLD NIIQPFIRQN PQLDIYQymd diYIGSNLSK kehkekveel rklllwwGFE TPEDKLQEEP PYTWMGYELH PLTWTIQQKQ LDIPEQPTLn elqklagkiN WASQAIPdls ikaltnmmRG NQNLNSTrqw tkearlevqk akkaieeqvQ LGYYDPSKel yaklsLVGPH QISYQVYQKD pekilwygkm srqkkkaent cdialracyk ireesiIRIG KEPRYEIPTS REawesNLIN SPYLKAPPPE Veyihaalni kralsmIKDA PIPGAETWYI Dggrklgkaa kaayWTDTGK WRVMDLEGSn qkaeiqalll alkaGSEEMN IItdsqyvin iilqqpdmme giwqevleel ekktaifIDW VPGHKGIPGN EEvdklcqtm miieGDGILD KRSEDAgydl laakeiHLLP GEVKVIPTGV KLMLPKGYWG LIIGKSSIGS KGLDVLGGVI DEGYRGEigv iminvsrksi tlmerqkiaq liilpckhev LEQGKVVMDS ERGDNGYGST GVfsswvdri eeaeINHEKF HSDPQYLRTE FNLPkmvaee irrkCPVCRI IGEQVGGQLK IGPGIWQMDC THFDGkiilv gihvesgyiw aqiisqetad ctvkavlqll sahNVTELQT DNGPNFKNQK megvlnymGV KHKFGIPGNP QSQalvenvn htlkvwiqkf LPETTSLDna lslavhslNF KRRGRIGGMA Pyellaqqes lriqdyfsai pqklqaqwiy ykdQKDKKWK GPMRVEYWGQ GSVLLKDEEK GYFLIPRRHI RRVPEPCALP EGDE
>P16088_HOTLOOPS
1-19, 45-54, 82-103, 166-186, 200-227, 512-522, 531-552, 689-697, 735-746, 765-772, 828-840, 857-868, 955-966, 1089-1097, 1103-1124
KEFGKLEGGA SCSPSESNAa ssnaictsng getigfvnyn kvgtTTTLEK RPEIlifvng ypikflldtg aditilnrrd fQVKNSIENG RQNMIGVGGG KRGtnyinvh leirdenykt qcifgnvcvl ednsliqpll grdnmikfni rlvmaqisdk ipvvkVKMKD PNKGPQIKQW PLTNEKieal teiverlekE GKVKRADSNN PWNTPVFAIK KKSGKWRmli dfrelnklte kgaevqlglp hpaglqikkq vtvldigday ftipldpdya pytaftlprk nnagpgrrfv wcslpqgwil spliyqstld niiqpfirqn pqldiyqymd diyigsnlsk kehkekveel rklllwwgfe tpedklqeep pytwmgyelh pltwtiqqkq ldipeqptln elqklagkin wasqaipdls ikaltnmmrg nqnlnstrqw tkearlevqk akkaieeqvq lgyydpskel yaklslvgph qisyqvyqkd pekilwygkm sRQKKKAENT CDialracyk IREESIIRIG KEPRYEIPTS REawesnlin spylkapppe veyihaalni kralsmikda pipgaetwyi dggrklgkaa kaaywtdtgk wrvmdlegsn qkaeiqalll alkagseemn iitdsqyvin iilqqpdmme giwqevleel ekktaifiDW VPGHKGIpgn eevdklcqtm miiegdgild krsedagydl laakEIHLLP GEVKVIptgv klmlpkgywg liigKSSIGS KGldvlggvi degyrgeigv iminvsrksi tlmerqkiaq liilpckhev leqgkvvMDS ERGDNGYGST gvfsswvdri eeaeinHEKF HSDPQYLRte fnlpkmvaee irrkcpvcri igeqvggqlk igpgiwqmdc thfdgkiilv gihvesgyiw aqiisqetad ctvkavlqll sahnVTELQT DNGPNFknqk megvlnymgv khkfgipgnp qsqalvenvn htlkvwiqkf lpettsldna lslavhslnf krrgriggma pyellaqqes lriqdyfsai pqklqaqwiy ykdqkdkkwk gpmrveywGQ GSVLLKDeek gyFLIPRRHI RRVPEPCALP EGDE
>P16088_REM465
1-22
KEFGKLEGGA SCSPSESNAA SSnaictsng getigfvnyn kvgttttlek rpeilifvng ypikflldtg aditilnrrd fqvknsieng rqnmigvggg krgtnyinvh leirdenykt qcifgnvcvl ednsliqpll grdnmikfni rlvmaqisdk ipvvkvkmkd pnkgpqikqw pltnekieal teiverleke gkvkradsnn pwntpvfaik kksgkwrmli dfrelnklte kgaevqlglp hpaglqikkq vtvldigday ftipldpdya pytaftlprk nnagpgrrfv wcslpqgwil spliyqstld niiqpfirqn pqldiyqymd diyigsnlsk kehkekveel rklllwwgfe tpedklqeep pytwmgyelh pltwtiqqkq ldipeqptln elqklagkin wasqaipdls ikaltnmmrg nqnlnstrqw tkearlevqk akkaieeqvq lgyydpskel yaklslvgph qisyqvyqkd pekilwygkm srqkkkaent cdialracyk ireesiirig kepryeipts reawesnlin spylkapppe veyihaalni kralsmikda pipgaetwyi dggrklgkaa kaaywtdtgk wrvmdlegsn qkaeiqalll alkagseemn iitdsqyvin iilqqpdmme giwqevleel ekktaifidw vpghkgipgn eevdklcqtm miiegdgild krsedagydl laakeihllp gevkviptgv klmlpkgywg liigkssigs kgldvlggvi degyrgeigv iminvsrksi tlmerqkiaq liilpckhev leqgkvvmds ergdngygst gvfsswvdri eeaeinhekf hsdpqylrte fnlpkmvaee irrkcpvcri igeqvggqlk igpgiwqmdc thfdgkiilv gihvesgyiw aqiisqetad ctvkavlqll sahnvtelqt dngpnfknqk megvlnymgv khkfgipgnp qsqalvenvn htlkvwiqkf lpettsldna lslavhslnf krrgriggma pyellaqqes lriqdyfsai pqklqaqwiy ykdqkdkkwk gpmrveywgq gsvllkdeek gyfliprrhi rrvpepcalp egde
| JOB-ID | P16088_052025ZukRmX8AAQEAADCSH8YAAAAJ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P16088 |
| Description | sp|P16088|POL_FIVPE Pol polyprotein OS=Feline immunodeficiency virus (isolate Petaluma) OX=11674 GN=pol PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1124 |
| Download predictions | smoothed scores raw scores |