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>P18041_LOOPS
1-29, 63-76, 109-153, 164-193, 211-243, 252-264, 278-297, 307-317, 338-345, 353-360, 372-383, 392-465, 497-506
MGARNSVLRG KKADELEKIR LRPSGKKKYr lkhivwaane ldkfglaesl leskegcqki ltVLDPLVPT GSENLKslfn tvcviwclha eekvkdteea kklvqrhlGA ETGTAEKMPS TSRPTAPPSG RGRNFPVQQT GGGNYIHVPL SPRtlnawvk lveDKKFGAE VVPGFQALSE GCTPYDINQM LNCvgdhqaa mqiireiind EAADWDAQHP IPGPLPAGQL RDPRGSDIAG TTStveeqiq wMYRPQNPVP VGNIyrrwiq iglqkcvRMY NPTNILDVKQ GPKEPFQsyv drfyksLRAE QTDPAVKnwm tqtlliqnan pdcklvlKGL GMNPTleeml taCQGVGGPG qkarlmaeal kEALTPPPIP FAAaqqrkvi rCWNCGKEGH SARQCRAPRR QGCWKCGKTG HVMAKCPERQ AGFLGMGPWG KKPRNFPVAQ APPGLIPTAP PADPAvdlle rymqqgreqr eqrerpykev tedllhLEQG KAPHREated llhlnslfgk dq
>P18041_HOTLOOPS
1-31, 108-132, 283-293, 399-411, 477-487, 513-522
MGARNSVLRG KKADELEKIR LRPSGKKKYR Lkhivwaane ldkfglaesl leskegcqki ltvldplvpt gsenlkslfn tvcviwclha eekvkdteea kklvqrhLGA ETGTAEKMPS TSRPTAPPSG RGrnfpvqqt gggnyihvpl sprtlnawvk lvedkkfgae vvpgfqalse gctpydinqm lncvgdhqaa mqiireiind eaadwdaqhp ipgplpagql rdprgsdiag ttstveeqiq wmyrpqnpvp vgniyrrwiq iglqkcvrmy npTNILDVKQ GPKepfqsyv drfykslrae qtdpavknwm tqtlliqnan pdcklvlkgl gmnptleeml tacqgvggpg qkarlmaeal kealtpppip faaaqqrkvi rcwncgkeGH SARQCRAPRR Qgcwkcgktg hvmakcperq agflgmgpwg kkprnfpvaq appgliptap padpavdlle rymqqgREQR EQRERPYkev tedllhleqg kaphreated llHLNSLFGK DQ
>P18041_REM465
1-10, 114-131, 397-410, 476-487
MGARNSVLRG kkadelekir lrpsgkkkyr lkhivwaane ldkfglaesl leskegcqki ltvldplvpt gsenlkslfn tvcviwclha eekvkdteea kklvqrhlga etgTAEKMPS TSRPTAPPSG Rgrnfpvqqt gggnyihvpl sprtlnawvk lvedkkfgae vvpgfqalse gctpydinqm lncvgdhqaa mqiireiind eaadwdaqhp ipgplpagql rdprgsdiag ttstveeqiq wmyrpqnpvp vgniyrrwiq iglqkcvrmy nptnildvkq gpkepfqsyv drfykslrae qtdpavknwm tqtlliqnan pdcklvlkgl gmnptleeml tacqgvggpg qkarlmaeal kealtpppip faaaqqrkvi rcwncgKEGH SARQCRAPRR qgcwkcgktg hvmakcperq agflgmgpwg kkprnfpvaq appgliptap padpavdlle rymqqGREQR EQRERPYkev tedllhleqg kaphreated llhlnslfgk dq
| JOB-ID | P18041_225052Zz@5TH8AAQEAAGD0qZ8AAAAS |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P18041 |
| Description | sp|P18041|GAG_HV2G1 Gag polyprotein OS=Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) OX=11717 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 522 |
| Download predictions | smoothed scores raw scores |