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>P18802_LOOPS
1-28, 43-55, 64-71, 119-146, 159-180, 207-237, 247-257, 274-291, 347-355, 378-423, 433-498, 509-536, 554-570, 577-611, 627-657, 673-744, 753-761, 770-780, 796-838, 869-881, 893-906, 929-947, 967-980, 993-1006, 1015-1058, 1071-1083, 1090-1098, 1120-1130, 1166-1175, 1187-1212, 1226-1239, 1249-1266, 1278-1293, 1329-1340, 1369-1407, 1416-1432
MGARASVLSG GKLDTWERIR LRPGGKKKya lkhliwasre leRFTLNPGL LETSEgckqi igqLQPSIQT Gseeirslyn tvatlycvhe rievkdtkea vekmeeeqnk skkktqqaAA DSSQVSQNYP IVQNLQGQMV HQAISPrtln awvkvieeKA FSPEVIPMFS ALSEGATPQD lntmlntvgg hqaamqmlke tindeaAEWD RLHPVHAGPV APGQMREPRG SDIAGTTstl qeqiawMTSN PPIPVGEiyk rwiilglnki vrmYSPVSIL DIRQGPKEPF Rdyvdrfykt lraeqasqdv knwmtetllv qnanpdckti lkalgpqatl eemmtaCQGV GGPGHkarvl aeamsqvtgs atavmmqRGN FKGPRKSIKC FNCGKEGHTA KNCRAPRKKG CWKCGREGHQ MKDcterqan flREDLAFPQ GKAGEFSSEQ TRANSPTSRE LRVWGGDNPL SETGAERQGT VSFSFPQITL WQRPLVTIki ggqlkealLD TGADDTVLEE INLPGKWKPK MIGGIGgfik vrqydqilie icgYKAMGTV LVGPTPVNII grnlltQIGC TLNFPISPIE TVPVKLKPGM DGPKVKQWPL Teekikalte ictemeKEGK ISRIGPENPY NTPIFAIKKK DSTKWRKlvd frelnkrtqd fwEVQLGIPH PAGLKKKKSV TVLDVGDAYF SVPLDEDFRK YTAFTIPSIN NETPGIRYQY NVLPQGWKGS PAIFqssmtk ilEPFRKQNP EiviyqymdD LYVGSDLEIG qhrtkieelr ehllrWGFTT PDKKHQKEPP FLWMGYELHP DKWTVQPINL PEKESWTVnd iqklvgklnw asqiyagikv kqlckllrGT KALTEVVPLT Eeaelelaen reILKEPVHG VYYDPSkdli aelqkqgdgq wtyqiyqePF KNLKTGKYAR TRGAHTNdvk qlteavqkia tesiviWGKT PKFKLPIQKE twetwwieyw qaTWIPEWEF VNTPPLvklw yqleKEPIIG AETFYVDGAA NRETKLGKAG YVTDRGRQKV VPFTDTTNqk telqainlal QDSGLEVNIV TDSqyalgiI QAQPDKSEse lvsqiieqli kkekvylawV PAHKGIGGNE qvdklvsqgi rkvlfldgid kaqeehekyh nnwraMASDF NLPPVvakei vascdkCQLK GEAMHGQVDC SPGIWQLDCT HLegkvilva vhvasGYIEA EVIPAETGQe tayfllklAG RWPVKVVHTD NGSNFTsatv kaacwwaGIK QEFGIPYNPQ SQGvvesmnk elkkiigqvr dqaehlktav qmavfihnFK RKGGIGGYSA geriidiiat diqtrelqkq iikiqnfrVY YRDSRDPIWK GPAKLLWKGE GAVVIQDNSD IKVVPRRkvk iirdyGKQMA GDDCVASRQD ED
>P18802_HOTLOOPS
1-29, 107-124, 279-289, 378-386, 395-409, 439-465, 471-492, 519-532, 591-612, 627-656, 666-690, 715-725, 797-808, 872-882, 887-898, 962-978, 1031-1060, 1363-1377, 1388-1408, 1413-1432
MGARASVLSG GKLDTWERIR LRPGGKKKYa lkhliwasre lerftlnpgl letsegckqi igqlqpsiqt gseeirslyn tvatlycvhe rievkdtkea vekmeeEQNK SKKKTQQAAA DSSQvsqnyp ivqnlqgqmv hqaisprtln awvkvieeka fspevipmfs alsegatpqd lntmlntvgg hqaamqmlke tindeaaewd rlhpvhagpv apgqmreprg sdiagttstl qeqiawmtsn ppipvgeiyk rwiilglnki vrmyspvsIL DIRQGPKEPf rdyvdrfykt lraeqasqdv knwmtetllv qnanpdckti lkalgpqatl eemmtacqgv ggpghkarvl aeamsqvtgs atavmmqRGN FKGPRKsikc fncgKEGHTA KNCRAPRKKg cwkcgreghq mkdcterqan flredlafPQ GKAGEFSSEQ TRANSPTSRE LRVWGgdnpl SETGAERQGT VSFSFPQITL WQrplvtiki ggqlkealld tgaddtvlEE INLPGKWKPK MIggiggfik vrqydqilie icgykamgtv lvgptpvnii grnlltqigc tlnfpispie TVPVKLKPGM DGPKVKQWPL TEekikalte ictemeKEGK ISRIGPENPY NTPIFAIKKK DSTKWRklvd frelnKRTQD FWEVQLGIPH PAGLKKKKSV tvldvgdayf svpldedfrk ytafTIPSIN NETPGiryqy nvlpqgwkgs paifqssmtk ilepfrkqnp eiviyqymdd lyvgsdleig qhrtkieelr ehllrwGFTT PDKKHQKEpp flwmgyelhp dkwtvqpinl pekeswtvnd iqklvgklnw asqiyagikv kqlckllrgt kALTEVVPLT EEaeleLAEN REILKEPVhg vyydpskdli aelqkqgdgq wtyqiyqepf knlktgkyar trgahtndvk qlteavqkia tESIVIWGKT PKFKLPIQke twetwwieyw qatwipewef vntpplvklw yqlekepiig aetfyvdgaa NRETKLGKAG YVTDRGRQKV VPFTDTTNQK telqainlal qdsglevniv tdsqyalgii qaqpdksese lvsqiieqli kkekvylawv pahkgiggne qvdklvsqgi rkvlfldgid kaqeehekyh nnwramasdf nlppvvakei vascdkcqlk geamhgqvdc spgiwqldct hlegkvilva vhvasgyiea evipaetgqe tayfllklag rwpvkvvhtd ngsnftsatv kaacwwagik qefgipynpq sqgvvesmnk elkkiigqvr dqaehlktav qmavfihnfk rkggiggysa geriidiiat diqtrelqkq iiKIQNFRVY YRDSRDPiwk gpakllwKGE GAVVIQDNSD IKVVPRRKvk iiRDYGKQMA GDDCVASRQD ED
>P18802_REM465
1-9, 101-125, 443-459, 1094-1102, 1415-1432
MGARASVLSg gkldtwerir lrpggkkkya lkhliwasre lerftlnpgl letsegckqi igqlqpsiqt gseeirslyn tvatlycvhe rievkdtkea VEKMEEEQNK SKKKTQQAAA DSSQVsqnyp ivqnlqgqmv hqaisprtln awvkvieeka fspevipmfs alsegatpqd lntmlntvgg hqaamqmlke tindeaaewd rlhpvhagpv apgqmreprg sdiagttstl qeqiawmtsn ppipvgeiyk rwiilglnki vrmyspvsil dirqgpkepf rdyvdrfykt lraeqasqdv knwmtetllv qnanpdckti lkalgpqatl eemmtacqgv ggpghkarvl aeamsqvtgs atavmmqrgn fkgprksikc fncgkeghta kncraprkkg cwkcgreghq mkdcterqan flredlafpq gkAGEFSSEQ TRANSPTSRe lrvwggdnpl setgaerqgt vsfsfpqitl wqrplvtiki ggqlkealld tgaddtvlee inlpgkwkpk miggiggfik vrqydqilie icgykamgtv lvgptpvnii grnlltqigc tlnfpispie tvpvklkpgm dgpkvkqwpl teekikalte ictemekegk isrigpenpy ntpifaikkk dstkwrklvd frelnkrtqd fwevqlgiph paglkkkksv tvldvgdayf svpldedfrk ytaftipsin netpgiryqy nvlpqgwkgs paifqssmtk ilepfrkqnp eiviyqymdd lyvgsdleig qhrtkieelr ehllrwgftt pdkkhqkepp flwmgyelhp dkwtvqpinl pekeswtvnd iqklvgklnw asqiyagikv kqlckllrgt kaltevvplt eeaelelaen reilkepvhg vyydpskdli aelqkqgdgq wtyqiyqepf knlktgkyar trgahtndvk qlteavqkia tesiviwgkt pkfklpiqke twetwwieyw qatwipewef vntpplvklw yqlekepiig aetfyvdgaa nretklgkag yvtdrgrqkv vpftdttnqk telqainlal qdsglevniv tdsqyalgii qaqPDKSESE LVsqiieqli kkekvylawv pahkgiggne qvdklvsqgi rkvlfldgid kaqeehekyh nnwramasdf nlppvvakei vascdkcqlk geamhgqvdc spgiwqldct hlegkvilva vhvasgyiea evipaetgqe tayfllklag rwpvkvvhtd ngsnftsatv kaacwwagik qefgipynpq sqgvvesmnk elkkiigqvr dqaehlktav qmavfihnfk rkggiggysa geriidiiat diqtrelqkq iikiqnfrvy yrdsrdpiwk gpakllwkge gavviqdnsd ikvvprrkvk iirdYGKQMA GDDCVASRQD ED
| JOB-ID | P18802_122024ZwppiH8AAQEAAGAGUeAAAAAH |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P18802 |
| Description | sp|P18802|POL_HV1ND Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype D (isolate NDK) OX=11695 GN=gag-pol PE=3 SV=3 |
| Title/ID | none |
| Sequence length | 1432 |
| Download predictions | smoothed scores raw scores |