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>P19505_LOOPS
1-29, 65-76, 112-152, 164-187, 210-243, 253-262, 277-296, 306-316, 337-344, 352-359, 374-381, 393-515, 522-559, 571-582, 595-624, 640-666, 678-756, 765-777, 786-793, 809-851, 865-873, 911-946, 979-989, 1004-1018, 1027-1059, 1083-1095, 1100-1110, 1132-1143, 1238-1250, 1262-1278, 1292-1304, 1340-1353, 1389-1401, 1425-1449
MGARNSVLSG KKADELEKIR LRPGGKKRYq lkhivwaane ldrfglaesl lenkegcqki lsvlAPLVPT GSENLKslyn tvcvlwciha eekvkhteea kqivqrhlvv eTGTADKMPA TSRPTAPPSG KGGNYPVQQI GGNYTHLPLS PRtlnawvkl ieeKKFGAEV VPGFQALSEG CTPYDINqml ncvgehqaam qiireiineE AADWDLQHPQ PGPIPPGQLR EPRGSDIAGT TSTvdeqiqw myRQQNPIPV GNiyrrwiql glqkcvRMYN PTNILDVKQG PKEPFQsyvd rfyksLRAEQ TDPAVKnwmt qtlliqnanp dcklvlKGLG INPTleemlt aCQGVGGPGq karlmaealk dalTQGPLPF Aavqqkgqrk iiKCWNCGKE GHSARQCRAP RRQGCWKCGK AGHVMAKCPE RQAGFFRAWP MGKEAPQFPH GPDASGADTN CSPRGSSCGS TEELHEDGQK AEGEQRETLQ GGNGGFAAPQ FSLWRRPIVT AYIEEqpvev lLDTGADDSI VAGIELGPNY TPKIVGGIGG FINTKEYKDv kikvlgkvik GTIMTGDTPI NIfgrnllta mgmsLNLPIA KVEPIKVTLK PGKDGPKLRQ WPLSkekiia lreicekmeK DGQLEEAPPT NPYNTPTFAI KKKDKNkwrm lidfrelNKV TQDFTEVQLG IPHPAGLAKR RRITVLDVGD AYFSIPLDEE FRQYTAFTLP SVNNAEPGKR YIYKVLPQGW KGSPAIfqht mrnvLEPFRK ANPDVTLiqy mddilIASDR TDLehdrvvl qlkellnsIG FSTPEEKFQK DPPFQWMGYE LWPTKWKLQK IELPQRETWT Vndiqklvgv lnwaAQIYPG IKTkhlcrli rgkmtlteev qwtemaeaey eenkiilsqe QEGCYYQEGK PLEATVIKSQ DNQWSYKIHQ EDKILKvgkf akiknthtng vrllahvvqk igkeaiviWG QVPRFHLPVe reiweqwwtd ywqVTWIPEW DFVSTPPLvr lvfnlvKEPI QGAETFYVDG SCNRQSREGK AGYVTDRGRd kaklleqttn qqaeleafyl alADSGPKAN IIVDSqyvmG IVAGQPTESE srlvnqiiee mikkeaiyva wVPAHKGIGG NQEvdhlvsq girqvlflek iepaqeehek yhsnvkelvf kfglprlvak qivdtcdkch qkgeaihgqv naelgtwqmd cthlegkiii vavhvasGFI EAEVIPQETG rqtalfllkl aSRWPITHLH TDNGANFTsq evkmvawwag iEQTFGVPYN PQSQgvveam nhhlktqidr ireqansiet ivlmavhcmN FKRRGGIGDM TPAerlvnmi tteqeiqfqq sknskfknfr vyyregrdQL WKGPGELLWK Gegavilkvg teikvvprrk akiiKDYGGG KELDSGSHLE DTGEAREVA
>P19505_HOTLOOPS
1-31, 112-132, 282-292, 401-413, 534-545, 550-560, 569-580, 602-626, 641-666, 680-702, 728-738, 808-824, 1035-1059, 1366-1378, 1409-1449
MGARNSVLSG KKADELEKIR LRPGGKKRYQ Lkhivwaane ldrfglaesl lenkegcqki lsvlaplvpt gsenlkslyn tvcvlwciha eekvkhteea kqivqrhlvv eTGTADKMPA TSRPTAPPSG KGgnypvqqi ggnythlpls prtlnawvkl ieekkfgaev vpgfqalseg ctpydinqml ncvgehqaam qiireiinee aadwdlqhpq pgpippgqlr eprgsdiagt tstvdeqiqw myrqqnpipv gniyrrwiql glqkcvrmyn pTNILDVKQG PKepfqsyvd rfykslraeq tdpavknwmt qtlliqnanp dcklvlkglg inptleemlt acqgvggpgq karlmaealk daltqgplpf aavqqkgqrk iikcwncgke GHSARQCRAP RRQgcwkcgk aghvmakcpe rqagffrawp mgkeapqfph gpdasgadtn csprgsscgs teelhedgqk aegeqretlq ggnggfaapq fslwrrpivt ayieeqpvev lldtgaddsi vagIELGPNY TPKIVggigG FINTKEYKDV kikvlgkvIK GTIMTGDTPI nifgrnllta mgmslnlpia kVEPIKVTLK PGKDGPKLRQ WPLSKEkiia lreicekmek DGQLEEAPPT NPYNTPTFAI KKKDKNkwrm lidfrelnkV TQDFTEVQLG IPHPAGLAKR RRitvldvgd ayfsipldee frqytafTLP SVNNAEPGkr yiykvlpqgw kgspaifqht mrnvlepfrk anpdvtliqy mddiliasdr tdlehdrvvl qlkellnSIG FSTPEEKFQK DPPFqwmgye lwptkwklqk ielpqretwt vndiqklvgv lnwaaqiypg iktkhlcrli rgkmtlteev qwtemaeaey eenkiilsqe qegcyyqegk pleatviksq dnqwsykihq edkilkvgkf akiknthtng vrllahvvqk igkeaiviwg qvprfhlpve reiweqwwtd ywqvtwipew dfvstpplvr lvfnlvkepi qgaeTFYVDG SCNRQSREGK AGYVTDRGRd kaklleqttn qqaeleafyl aladsgpkan iivdsqyvmg ivagqptese srlvnqiiee mikkeaiyva wvpahkgigg nqevdhlvsq girqvlflek iepaqeehek yhsnvkelvf kfglprlvak qivdtcdkch qkgeaihgqv naelgtwqmd cthlegkiii vavhvasgfi eaevipqetg rqtalfllkl asrwpithlh tdnganftsq evkmvawwag ieqtfgvpyn pqsqgvveam nhhlktqidr ireqansiet ivlmavhcmn fkrrggigdm tpaerlvnmi tteqeIQFQQ SKNSKFKNfr vyyregrdql wkgpgellwk gegavilkVG TEIKVVPRRK AKIIKDYGGG KELDSGSHLE DTGEAREVA
>P19505_REM465
1-10, 117-131, 399-413, 452-487, 1435-1449
MGARNSVLSG kkadelekir lrpggkkryq lkhivwaane ldrfglaesl lenkegcqki lsvlaplvpt gsenlkslyn tvcvlwciha eekvkhteea kqivqrhlvv etgtadKMPA TSRPTAPPSG Kggnypvqqi ggnythlpls prtlnawvkl ieekkfgaev vpgfqalseg ctpydinqml ncvgehqaam qiireiinee aadwdlqhpq pgpippgqlr eprgsdiagt tstvdeqiqw myrqqnpipv gniyrrwiql glqkcvrmyn ptnildvkqg pkepfqsyvd rfykslraeq tdpavknwmt qtlliqnanp dcklvlkglg inptleemlt acqgvggpgq karlmaealk daltqgplpf aavqqkgqrk iikcwncgKE GHSARQCRAP RRQgcwkcgk aghvmakcpe rqagffrawp mgkeapqfph gPDASGADTN CSPRGSSCGS TEELHEDGQK AEGEQREtlq ggnggfaapq fslwrrpivt ayieeqpvev lldtgaddsi vagielgpny tpkivggigg fintkeykdv kikvlgkvik gtimtgdtpi nifgrnllta mgmslnlpia kvepikvtlk pgkdgpklrq wplskekiia lreicekmek dgqleeappt npyntptfai kkkdknkwrm lidfrelnkv tqdftevqlg iphpaglakr rritvldvgd ayfsipldee frqytaftlp svnnaepgkr yiykvlpqgw kgspaifqht mrnvlepfrk anpdvtliqy mddiliasdr tdlehdrvvl qlkellnsig fstpeekfqk dppfqwmgye lwptkwklqk ielpqretwt vndiqklvgv lnwaaqiypg iktkhlcrli rgkmtlteev qwtemaeaey eenkiilsqe qegcyyqegk pleatviksq dnqwsykihq edkilkvgkf akiknthtng vrllahvvqk igkeaiviwg qvprfhlpve reiweqwwtd ywqvtwipew dfvstpplvr lvfnlvkepi qgaetfyvdg scnrqsregk agyvtdrgrd kaklleqttn qqaeleafyl aladsgpkan iivdsqyvmg ivagqptese srlvnqiiee mikkeaiyva wvpahkgigg nqevdhlvsq girqvlflek iepaqeehek yhsnvkelvf kfglprlvak qivdtcdkch qkgeaihgqv naelgtwqmd cthlegkiii vavhvasgfi eaevipqetg rqtalfllkl asrwpithlh tdnganftsq evkmvawwag ieqtfgvpyn pqsqgvveam nhhlktqidr ireqansiet ivlmavhcmn fkrrggigdm tpaerlvnmi tteqeiqfqq sknskfknfr vyyregrdql wkgpgellwk gegavilkvg teikvvprrk akiikdyggg keldSGSHLE DTGEAREVA
| JOB-ID | P19505_045356ZukLZH8AAQEAADCTjqAAAABF |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P19505 |
| Description | sp|P19505|POL_SIVSP Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate PBj14/BCL-3) OX=11738 GN=gag-pol PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1449 |
| Download predictions | smoothed scores raw scores |