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>P19560_LOOPS
14-23, 62-74, 90-99, 116-163, 173-183, 230-251, 280-298, 310-317, 336-349, 375-500, 509-530, 540-561, 578-603, 620-644, 659-734, 782-792, 804-825, 836-856, 878-886, 911-930, 954-964, 974-1014, 1023-1035, 1048-1075, 1087-1110, 1120-1168, 1198-1221, 1238-1257, 1277-1287, 1310-1319, 1331-1348, 1382-1393, 1426-1442, 1449-1475
mkrrelekkl rkvRVTPQQD KYYtignlqw airminlmgi kcvcdeecsa aevaliitqf sALDLENSPI RGKEevaikn tlkvfwsllA GYKPESTETa lgyweaftyr erearADKEG EIKSIYPSLT QNTQNKKQTS NQTNTQSLPA ITTQDGTPRF DPDlmkqlki wsDATERNGV DLHavnilgv itanlvqeei klllnstpkw rldvqliesk vrekenahrT WKQHHPEAPK TDEIIGKGLS Saeqatlisv ecretfrqwv lqaamevaqA KHATPGPINI HQGPKEPYtd finrlvaalE GMAAPETtke yllqhlsidh anedcQSILR PLGPNTPMEk kleacrvvgs qkskmqflva amkeMGIQSP IPAVLPHTPE AYASQTSGPE DGRRCYGCGK TGHLKRNCKQ QKCYHCGKPG HQARNCRSKN REVLLCPLWA EEPTTEQFSP EQHEFCDPIC TPSYIRLDKQ PFIKVFIGGR WVKGLVDTGA devvlkniHW DRIKGYPGTP IKQIGVNGVN vakrkthveW RFKDKTGIID VLFSDTPVNL Fgrsllrsiv tcftllvHTE KIEPLPVKVR GPGPKVPQWP LTKekyqalk eivkdllaeG KISEAAWDNP YNTPVFVIKK KGTGrwrmlm dfrelnkiTV KGQEFSTGLP YPPGIKECEH LTAIDIKDAY FTIPLHEDFR PFTAFSVVPV NREGPIERFQ WNVLPQGWVC SPAIyqtttq kiienikksh pdvmlyqymd dlligsnrdd hkqivqeird kLGSYGFKTP DEkvqeervk wigFELTPKK WRFQPRQLKI KNPLTvnelq qlvgnCVWVQ PEVKIPLYPL TDLLRDktnl qekiqltpea ikcveefNLK LKDPEWkdri regaelviki qmvprgivfd LLQDGNPIWG GVKGLNYDHS nkikkilrtm nelnrtvvim tgrEASFLLP GSSEdweaal qkeESLTQIF PVKFYRHSCR WTSICGPVRE NLTTYYTDGG KKGKtaaavy wcEGRTKSKV FPGTNqqael kaicmalLDG PPKMNIITDS RYAYEGMREE PETWAregiw leiakiLPFK QYVGVGWVPA HKGIGGNTEA degvkkaleQ MAPCSPPEAI LLKPGEKQNL ETGIYMQGLR PQSFLPRADL PVAITGTMvd selqlqllni gtehiriqkd evfmtcfLEN IPSATEDHER WHTSPDILVR Qfhlpkriak eivarcqECK RTTTSPVRGT NPRGRFLwqm dnthwnktii wvavetNSGL VEAQVIPeet alqvalcilq liqrytvlhL HSDNGPCFTa hrienlckyl GITKTTGIPY NPQSQGVVer ahrdlkdrla ayqgdcetve aalslalvsl nKKRGGIGGH TPYeiylese htkyqdqleq qfskqkiekw cyvrnRRKEW KGPYKVLWDG DGaavieeEG KTALYPHRHM RFIPPPDSDI QDGSS
>P19560_HOTLOOPS
1-26, 61-72, 91-100, 125-160, 204-212, 227-246, 393-403, 429-439, 510-528, 539-557, 580-602, 622-644, 659-673, 781-794, 804-817, 876-887, 988-1013, 1235-1254, 1335-1347, 1380-1388, 1425-1438, 1452-1475
MKRRELEKKL RKVRVTPQQD KYYTIGnlqw airminlmgi kcvcdeecsa aevaliitqf SALDLENSPI RGkeevaikn tlkvfwslla GYKPESTETA lgyweaftyr erearadkeg eiksIYPSLT QNTQNKKQTS NQTNTQSLPA ITTQDGTPRF dpdlmkqlki wsdaterngv dlhavnilgv itanlvqeei kllLNSTPKW RLdvqliesk vrekenAHRT WKQHHPEAPK TDEIIGkgls saeqatlisv ecretfrqwv lqaamevaqa khatpgpini hqgpkepytd finrlvaale gmaapettke yllqhlsidh anedcqsilr plgpntpmek kleacrvvgs qkskmqflva amkemgiqsp ipavlphtpe ayASQTSGPE DGRrcygcgk tghlkrnckq qkcyhcgkPG HQARNCRSKn revllcplwa eeptteqfsp eqhefcdpic tpsyirldkq pfikvfiggr wvkglvdtga devvlknihW DRIKGYPGTP IKQIGVNGvn vakrkthvEW RFKDKTGIID VLFSDTPvnl fgrsllrsiv tcftllvhtE KIEPLPVKVR GPGPKVPQWP LTkekyqalk eivkdllaeg kISEAAWDNP YNTPVFVIKK KGTGrwrmlm dfrelnkiTV KGQEFSTGLP YPPgikeceh ltaidikday ftiplhedfr pftafsvvpv nregpierfq wnvlpqgwvc spaiyqtttq kiienikksh pdvmlyqymd dlligsnrdd hkqivqeird KLGSYGFKTP DEKVqeervk wigFELTPKK WRFQPRQlki knpltvnelq qlvgncvwvq pevkiplypl tdllrdktnl qekiqltpea ikcveEFNLK LKDPEWKdri regaelviki qmvprgivfd llqdgnpiwg gvkglnydhs nkikkilrtm nelnrtvvim tgreasfllp gssedweaal qkeesltqif pvkfyrhSCR WTSICGPVRE NLTTYYTDGG KKGktaaavy wcegrtkskv fpgtnqqael kaicmalldg ppkmniitds ryayegmree petwaregiw leiakilpfk qyvgvgwvpa hkgiggntea degvkkaleq mapcsppeai llkpgekqnl etgiymqglr pqsflpradl pvaitgtmvd selqlqllni gtehiriqkd evfmtcflen ipsatedher whtspdilvr qfhlpkriak eivaRCQECK RTTTSPVRGT NPRGrflwqm dnthwnktii wvavetnsgl veaqvipeet alqvalcilq liqrytvlhl hsdngpcfta hrienlckyl gitkTTGIPY NPQSQGVver ahrdlkdrla ayqgdcetve aalslalvsL NKKRGGIGgh tpyeiylese htkyqdqleq qfskqkiekw cyvrNRRKEW KGPYKVLWdg dgaavieeeg kTALYPHRHM RFIPPPDSDI QDGSS
>P19560_REM465
1-10, 132-144, 222-236, 392-401, 454-462, 1468-1475
MKRRELEKKL rkvrvtpqqd kyytignlqw airminlmgi kcvcdeecsa aevaliitqf saldlenspi rgkeevaikn tlkvfwslla gykpesteta lgyweaftyr erearadkeg eiksiypslt qNTQNKKQTS NQTNtqslpa ittqdgtprf dpdlmkqlki wsdaterngv dlhavnilgv itanlvqeei klllnstpkw rldvqliesk vREKENAHRT WKQHHPeapk tdeiigkgls saeqatlisv ecretfrqwv lqaamevaqa khatpgpini hqgpkepytd finrlvaale gmaapettke yllqhlsidh anedcqsilr plgpntpmek kleacrvvgs qkskmqflva amkemgiqsp ipavlphtpe aYASQTSGPE Dgrrcygcgk tghlkrnckq qkcyhcgkpg hqarncrskn revllcplwa eepTTEQFSP EQhefcdpic tpsyirldkq pfikvfiggr wvkglvdtga devvlknihw drikgypgtp ikqigvngvn vakrkthvew rfkdktgiid vlfsdtpvnl fgrsllrsiv tcftllvhte kieplpvkvr gpgpkvpqwp ltkekyqalk eivkdllaeg kiseaawdnp yntpvfvikk kgtgrwrmlm dfrelnkitv kgqefstglp yppgikeceh ltaidikday ftiplhedfr pftafsvvpv nregpierfq wnvlpqgwvc spaiyqtttq kiienikksh pdvmlyqymd dlligsnrdd hkqivqeird klgsygfktp dekvqeervk wigfeltpkk wrfqprqlki knpltvnelq qlvgncvwvq pevkiplypl tdllrdktnl qekiqltpea ikcveefnlk lkdpewkdri regaelviki qmvprgivfd llqdgnpiwg gvkglnydhs nkikkilrtm nelnrtvvim tgreasfllp gssedweaal qkeesltqif pvkfyrhscr wtsicgpvre nlttyytdgg kkgktaaavy wcegrtkskv fpgtnqqael kaicmalldg ppkmniitds ryayegmree petwaregiw leiakilpfk qyvgvgwvpa hkgiggntea degvkkaleq mapcsppeai llkpgekqnl etgiymqglr pqsflpradl pvaitgtmvd selqlqllni gtehiriqkd evfmtcflen ipsatedher whtspdilvr qfhlpkriak eivarcqeck rtttspvrgt nprgrflwqm dnthwnktii wvavetnsgl veaqvipeet alqvalcilq liqrytvlhl hsdngpcfta hrienlckyl gitkttgipy npqsqgvver ahrdlkdrla ayqgdcetve aalslalvsl nkkrggiggh tpyeiylese htkyqdqleq qfskqkiekw cyvrnrrkew kgpykvlwdg dgaavieeeg ktalyphrhm rfipppdSDI QDGSS
| JOB-ID | P19560_050155ZukNQ38AAQEAADCSHRcAAAAB |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P19560 |
| Description | sp|P19560|POL_BIV29 Gag-Pol polyprotein OS=Bovine immunodeficiency virus (strain R29) OX=417296 GN=gag-pol PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1475 |
| Download predictions | smoothed scores raw scores |