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>P21404_LOOPS
1-56, 63-95, 102-132, 137-148, 154-190, 197-207, 212-232, 241-286, 296-311, 327-425, 461-479, 486-541, 553-568, 582-631, 692-782, 790-848, 854-880, 890-904, 912-961, 968-985, 992-1011, 1092-1100, 1110-1118, 1166-1173, 1179-1191, 1232-1253, 1267-1284, 1293-1304, 1310-1352, 1371-1414, 1431-1466, 1486-1495, 1532-1557, 1571-1583, 1589-1626, 1662-1707, 1714-1724, 1746-1768, 1773-1790, 1825-1861, 1885-1894, 1934-1963, 1970-1981, 1995-2033, 2054-2078, 2087-2109, 2119-2151, 2177-2189
MGAQVSTQKT GAHETSLSAA GNSIIHYTNI NYYKDAASNS ANRQDFTQDP SKFTEPvkdv miKSLPALNS PTVEECGYSD RVRSITLGNS TITTQecanv vVGYGRWPTY LRDDEATAED QPTQPDVATC RFytldSIKW EKGSVGWWwk fpeALSDMGL FGQNMQYHYL GRAGYTIHLQ CNASKFHQGC llvvcvPEAE MGGAVVGqaf sATAMANGDK AYEFTSATQS DQtkvqtaih NAGMGVGVGN LTIYPHQWIN LRTNNSATIV MPYINSVPMD NMFRHYnftl mvipfVKLDY ADTASTYVPI Tvtvapmcae ynglrlAQAQ GLPTMNTPGS TQFLTSDDFQ SPCALPQFDV TPSMNIPGEV KNLMEIAEVD SVVPVNNVQD TTDQMEMFRI PVTINAPLQQ QVFGLRLQPG LDSVFkhtll geilnyyahw sgsmkltfvf cgsamatgkf LIAYSPPGAN PPKTRKDAMl gthiiWDIGL QSSCVLCVPW ISQTHYRLVQ QDEYTSAGYV TCWYQTGMIV PPGTPNSSSI Mcfasacndf svRMLRDTPF ISQDNKLQgd veeaierarc tVADTMRTGP SNSASVPALT AVETGHTSQV TPSDTMQTRH VKNYHSRSES Tvenflgrsa cvymeeyktt dkhvnkkfva wpintkqmvq mrrklemfty lrfdmevtfv iTSRQDPGTT LAQDMPVLTR QIMYVPPGGP IPAKVDDYAW QTSTNPSIFW TEGNAPARMS IPFISIGNAY SNFYDGWSNF DQRGSYGYNT LNnlghiyvR HVSGSSPHPI TSTIRVYFKP KHTRAWVPRP PRLCQYKKAF SVDFTPTPIT DTRKDINTvt tvaQSRRRGD MSTLNTHGAF GQQSGAVYVG nyrvinrhlA THTDWQNCVW EDYNrdllvs tTTAHGCDVI ARCQCTTGVY FCASKNKHYP VSFEGPGLVE VQESEYYPKR YqshvllAAG FSEPGDCGGI LRCEHgvigi vTMGGEGVVG FADVRDLLWL Eddameqgvk dyveqlgnaf gsgftnqice qvnllkeslv gqdsileksl kalvkiisal vivvrnhddl itvtailali gCTSSPWRWL kqkvsqyygI PMAERQNDsw lkkftemtna ckrmewiaik iqkfiewlkv kilpevrekh eflnrLKQLP LLEsqiatIE QSAPSQSDQE Qlfsnvqyfa hycrkyaply aaeakrvfsl ekkmsnyiqf kSKCRIEPVC LLLHGSPGAG KSVatnligr slaeklNSSV YSLPPDPDHF DGYKqqavvi mdDLCQNPDG KDVSlfcqmV SSVDFVPPMA ALEEKGILFT SPFVLASTNA GSINAPTVSD SRalarrfhf dmnievismy SQNGKINMPM SVKTCDEECC PVNFKKCCPL VCGKAIQFID RRTQvrysld mlvtemfrey NHRHSVGATL EALFQGPPIY REIKISVAPE TPPPPViadl lksvdsedvr eyckeKGWLI PEVNStlqie kyvsraficl qaittfvsva giiyiiyklf aGFQGAYTGI PNQKPKVPTL RQAKVQGpaf efavammkrn SSTVKTEYGE FTMlgiydRW AVLPRHAKPG PTILMNDQEV GVMDAKELVD KDGTNLeltl lklnrnekfr dirgflakee mevneavlai nTSKFPNMYI PVGQVTDYGF LNLGGTPTKR MLMYNFPTRA GQCGGVLmst gkvLGIHVGG NGHQgfsaal lkhyfndeqg eiefiESSKD AGFPIINTPS KTKLEPSVfh qvFEGVKEPA VLRNGDPRLK anfeeaifsk yignvnthvd eymleavdhy agqlATLDIS TEPMKLEDAV YGTEGLEALD LTTSAGYPYV Algikkrdil skktrdltkl kecmDKYGLN LPMItyvkdq lrsaekvakg ksrlieassl ndsvamrqtf gnlYKTFHLN PGIVTGSAVG CDPDLFWSKI PVMlnghliA FDYSGYDASL Spvwfaclkl llekLGYSHK ETNYIDYLCN SHHLYRDKHY FVRGGMPSGC SGTsifnsmi nniiirtlml kvyKGIDLDQ FRMIAYGDDV IASYPWPIda sllaeaGKDY GLIMTPADKG ECFNEVTWTn vtflkryfRA DEQYPFLVHP VMPMKDIHES IRWTKDPKNT Qdhvrslcll awhngeheye efirkiRSVP VGRCLTLPAf stlrrkwlds f
>P21404_HOTLOOPS
1-20, 63-77, 86-100, 115-129, 560-570, 583-598, 606-634, 650-668, 691-706, 811-876, 1091-1098, 1112-1121, 1339-1350, 1406-1415, 1485-1496, 1618-1639, 1776-1785, 1860-1877, 1882-1892, 1914-1924, 2175-2201
MGAQVSTQKT GAHETSLSAA gnsiihytni nyykdaasns anrqdftqdp skftepvkdv miKSLPALNS PTVEECGysd rvrsiTLGNS TITTQECANV vvgygrwpty lrddEATAED QPTQPDVATc rfytldsikw ekgsvgwwwk fpealsdmgl fgqnmqyhyl gragytihlq cnaskfhqgc llvvcvpeae mggavvgqaf satamangdk ayeftsatqs dqtkvqtaih nagmgvgvgn ltiyphqwin lrtnnsativ mpyinsvpmd nmfrhynftl mvipfvkldy adtastyvpi tvtvapmcae ynglrlaqaq glptmntpgs tqfltsddfq spcalpqfdv tpsmnipgev knlmeiaevd svvpvnnvqd ttdqmemfri pvtinaplqq qvfglrlqpg ldsvfkhtll geilnyyahw sgsmkltfvf cgsamatgkf liaysppgan ppktrkdaml gthiiwdigl qsscvlcvpw isqthyrlvq qdeytsagyv tcwyqtgmiv ppgtpnsssi mcfasacndf svrmlrdtpF ISQDNKLQGD veeaierarc tvADTMRTGP SNSASVPAlt avetgHTSQV TPSDTMQTRH VKNYHSRSES TVENflgrsa cvymeeyktT DKHVNKKFVA WPINTKQMvq mrrklemfty lrfdmevtfv ITSRQDPGTT LAQDMPvltr qimyvppggp ipakvddyaw qtstnpsifw tegnaparms ipfisignay snfydgwsnf dqrgsygynt lnnlghiyvr hvsgssphpi tstirvyfkp KHTRAWVPRP PRLCQYKKAF SVDFTPTPIT DTRKDINTVT TVAQSRRRGD MSTLNTHGAF GQQSGAvyvg nyrvinrhla thtdwqncvw edynrdllvs tttahgcdvi arcqcttgvy fcasknkhyp vsfegpglve vqeseyypkr yqshvllaag fsepgdcggi lrcehgvigi vtmggegvvg fadvrdllwl eddameqgvk dyveqlgnaf gsgftnqice qvnllkeslv gqdsileksl kalvkiisal vivvrnhddl itvtailali GCTSSPWRwl kqkvsqyygi pMAERQNDSW Lkkftemtna ckrmewiaik iqkfiewlkv kilpevrekh eflnrlkqlp llesqiatie qsapsqsdqe qlfsnvqyfa hycrkyaply aaeakrvfsl ekkmsnyiqf kskcriepvc lllhgspgag ksvatnligr slaeklnssv yslppdpdhf dgykqqavvi mddlcqnpdg kdvslfcqmv ssvdfvppma aleekgilft spfvlastNA GSINAPTVSD sralarrfhf dmnievismy sqngkinmpm svktcdeecc pvnfkkccpl vcgkaIQFID RRTQVrysld mlvtemfrey nhrhsvgatl ealfqgppiy reikisvape tppppviadl lksvdsedvr eyckEKGWLI PEVNSTlqie kyvsraficl qaittfvsva giiyiiyklf agfqgaytgi pnqkpkvptl rqakvqgpaf efavammkrn sstvkteyge ftmlgiydrw avlprhakpg ptilmndqev gvmdakeLVD KDGTNLELTL LKLNRNEKFr dirgflakee mevneavlai ntskfpnmyi pvgqvtdygf lnlggtptkr mlmynfptra gqcggvlmst gkvlgihvgg nghqgfsaal lkhyfndeqg eiefiesskd agfpiintps ktklepsvfh qvfegVKEPA VLRNGdprlk anfeeaifsk yignvnthvd eymleavdhy agqlatldis tepmkledav ygtegleald lttsagypyV ALGIKKRDIL SKKTRDLtkl kECMDKYGLN LPmityvkdq lrsaekvakg ksrLIEASSL NDSVamrqtf gnlyktfhln pgivtgsavg cdpdlfwski pvmlnghlia fdysgydasl spvwfaclkl lleklgyshk etnyidylcn shhlyrdkhy fvrggmpsgc sgtsifnsmi nniiirtlml kvykgidldq frmiaygddv iasypwpida sllaeagkdy glimtpadkg ecfnevtwtn vtflkryfra deqypflvhp vmpmkdihes irwtkdpknt qdhvrslcll awhngeheye efirKIRSVP VGRCLTLPAF STLRRKWLDS F
>P21404_REM465
1-15, 116-123, 603-631, 1180-1189
MGAQVSTQKT GAHETslsaa gnsiihytni nyykdaasns anrqdftqdp skftepvkdv mikslpalns ptveecgysd rvrsitlgns tittqecanv vvgygrwpty lrddeATAED QPTqpdvatc rfytldsikw ekgsvgwwwk fpealsdmgl fgqnmqyhyl gragytihlq cnaskfhqgc llvvcvpeae mggavvgqaf satamangdk ayeftsatqs dqtkvqtaih nagmgvgvgn ltiyphqwin lrtnnsativ mpyinsvpmd nmfrhynftl mvipfvkldy adtastyvpi tvtvapmcae ynglrlaqaq glptmntpgs tqfltsddfq spcalpqfdv tpsmnipgev knlmeiaevd svvpvnnvqd ttdqmemfri pvtinaplqq qvfglrlqpg ldsvfkhtll geilnyyahw sgsmkltfvf cgsamatgkf liaysppgan ppktrkdaml gthiiwdigl qsscvlcvpw isqthyrlvq qdeytsagyv tcwyqtgmiv ppgtpnsssi mcfasacndf svrmlrdtpf isqdnklqgd veeaierarc tvadtmrtgp snsasvpalt avETGHTSQV TPSDTMQTRH VKNYHSRSES Tvenflgrsa cvymeeyktt dkhvnkkfva wpintkqmvq mrrklemfty lrfdmevtfv itsrqdpgtt laqdmpvltr qimyvppggp ipakvddyaw qtstnpsifw tegnaparms ipfisignay snfydgwsnf dqrgsygynt lnnlghiyvr hvsgssphpi tstirvyfkp khtrawvprp prlcqykkaf svdftptpit dtrkdintvt tvaqsrrrgd mstlnthgaf gqqsgavyvg nyrvinrhla thtdwqncvw edynrdllvs tttahgcdvi arcqcttgvy fcasknkhyp vsfegpglve vqeseyypkr yqshvllaag fsepgdcggi lrcehgvigi vtmggegvvg fadvrdllwl eddameqgvk dyveqlgnaf gsgftnqice qvnllkeslv gqdsileksl kalvkiisal vivvrnhddl itvtailali gctsspwrwl kqkvsqyygi pmaerqndsw lkkftemtna ckrmewiaik iqkfiewlkv kilpevrekh eflnrlkqlp llesqiatiE QSAPSQSDQe qlfsnvqyfa hycrkyaply aaeakrvfsl ekkmsnyiqf kskcriepvc lllhgspgag ksvatnligr slaeklnssv yslppdpdhf dgykqqavvi mddlcqnpdg kdvslfcqmv ssvdfvppma aleekgilft spfvlastna gsinaptvsd sralarrfhf dmnievismy sqngkinmpm svktcdeecc pvnfkkccpl vcgkaiqfid rrtqvrysld mlvtemfrey nhrhsvgatl ealfqgppiy reikisvape tppppviadl lksvdsedvr eyckekgwli pevnstlqie kyvsraficl qaittfvsva giiyiiyklf agfqgaytgi pnqkpkvptl rqakvqgpaf efavammkrn sstvkteyge ftmlgiydrw avlprhakpg ptilmndqev gvmdakelvd kdgtnleltl lklnrnekfr dirgflakee mevneavlai ntskfpnmyi pvgqvtdygf lnlggtptkr mlmynfptra gqcggvlmst gkvlgihvgg nghqgfsaal lkhyfndeqg eiefiesskd agfpiintps ktklepsvfh qvfegvkepa vlrngdprlk anfeeaifsk yignvnthvd eymleavdhy agqlatldis tepmkledav ygtegleald lttsagypyv algikkrdil skktrdltkl kecmdkygln lpmityvkdq lrsaekvakg ksrlieassl ndsvamrqtf gnlyktfhln pgivtgsavg cdpdlfwski pvmlnghlia fdysgydasl spvwfaclkl lleklgyshk etnyidylcn shhlyrdkhy fvrggmpsgc sgtsifnsmi nniiirtlml kvykgidldq frmiaygddv iasypwpida sllaeagkdy glimtpadkg ecfnevtwtn vtflkryfra deqypflvhp vmpmkdihes irwtkdpknt qdhvrslcll awhngeheye efirkirsvp vgrcltlpaf stlrrkwlds f
| JOB-ID | P21404_084917ZulCjH8AAQEAADCTmqUAAABI |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P21404 |
| Description | sp|P21404|POLG_CXA9 Genome polyprotein OS=Coxsackievirus A9 (strain Griggs) OX=12068 PE=1 SV=4 |
| Title/ID | none |
| Sequence length | 2201 |
| Download predictions | smoothed scores raw scores |