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>P22173_LOOPS
1-10, 21-46, 53-68, 86-125, 135-145, 158-166, 178-192, 204-258, 275-289, 297-328, 336-366, 390-412, 426-458, 465-474, 492-514, 534-557, 587-604, 636-707, 713-722, 745-755, 794-833
MSDIFNSPQN kasiltalmk STTGDVEDVL IPKRFRPAKD PLDSPQaaaq flKDNKYRIL RPRAIPTMve letdaalprl rqmveDGKLK DTVSVPEGTT AFYPKYYPFH KPDHDEVGTF GAPDItllkq ltffLLENDF PTGPEtlrqv reaiatlQYG SGSYSGqlnr llamkgvATG RNPNKTPKTV GYtneqlakl leqTLPINTP KHEDPDLRWA PSWLINYTGD LSTDKSYLPH VTIKSSAGLP YIGKTKGDtt aealvladsf irdlGRAATS ADPEAGVKKt itdfwyLSCG LLFPKGERYT QVDWDKKTRN IWSAPYPThl llsmvSTPVM NESKLNITNT QTPSLYGFSP FHGGMDrimt iirdsldnde dlvmiyadnI YILQDNTWYS IDLEKGEANC TPqhmqammy ylltrGWTNE DGSPRYNPTW ATFAMNVAPS MVVDSSCLlm nlqlKTYGQG SGNAftflnn hlmstivvae wVKAGKPNPM TKEFMDLEEK TGINfkiere lknlretive aveTAPQDGY LADGSDLPPI RPGKAVEldl lgwsaiysrq memfvpvlen erliasAAYP KGLENKALAR KPGAeiayqi vryeairlvg gwnnplleta akhmsLDKRK RLEVKGIDVT GFLDDWNNMS EFGGDLEGIT LSEPLTNQTL VDINTPLDSF DPKARPQTPR SPKKTLDevt taITSGTYKD PKsavwrlld qrtklrvstl rdqaLALKPA SSSVDnwaea teelaqqqql lmkannllks sltetreale tiqSDKIIAG KSNPEKNPGT AANPVVGYGE FSEKIPLTPT QKKnakrrek qrrnq
>P22173_HOTLOOPS
1-9, 20-30, 35-44, 49-61, 86-102, 179-191, 245-253, 277-289, 496-515, 533-550, 633-644, 686-724, 792-809, 821-845
MSDIFNSPQn kasiltalmK STTGDVEDVL ipkrFRPAKD PLDSpqaaAQ FLKDNKYRIL Rpraiptmve letdaalprl rqmveDGKLK DTVSVPEGTT AFypkyypfh kpdhdevgtf gapditllkq ltffllendf ptgpetlrqv reaiatlqyg sgsysgqlnr llamkgvaTG RNPNKTPKTV Gytneqlakl leqtlpintp khedpdlrwa pswlinytgd lstdksylph vtikSSAGLP YIGktkgdtt aealvladsf irdlgrAATS ADPEAGVKKt itdfwylscg llfpkgeryt qvdwdkktrn iwsapypthl llsmvstpvm nesklnitnt qtpslygfsp fhggmdrimt iirdsldnde dlvmiyadni yilqdntwys idlekgeanc tpqhmqammy ylltrgwtne dgsprynptw atfamnvaps mvvdsscllm nlqlktygqg sgnaftflnn hlmstivvae wvkagKPNPM TKEFMDLEEK TGINFkiere lknlretive avETAPQDGY LADGSDLPPI rpgkaveldl lgwsaiysrq memfvpvlen erliasaayp kglenkalar kpgaeiayqi vryeairlvg gwnnplleta akHMSLDKRK RLEVkgidvt gflddwnnms efggdlegit lsepltnqtl vdintPLDSF DPKARPQTPR SPKKTLDEVT TAITSGTYKD PKSAvwrlld qrtklrvstl rdqalalkpa sssvdnwaea teelaqqqql lmkannllks sltetreale tIQSDKIIAG KSNPEKNPGt aanpvvgyge FSEKIPLTPT QKKNAKRREK QRRNQ
>P22173_REM465
1-8, 277-284, 692-706, 830-845
MSDIFNSPqn kasiltalmk sttgdvedvl ipkrfrpakd pldspqaaaq flkdnkyril rpraiptmve letdaalprl rqmvedgklk dtvsvpegtt afypkyypfh kpdhdevgtf gapditllkq ltffllendf ptgpetlrqv reaiatlqyg sgsysgqlnr llamkgvatg rnpnktpktv gytneqlakl leqtlpintp khedpdlrwa pswlinytgd lstdksylph vtikssaglp yigktkgdtt aealvladsf irdlgrAATS ADPEagvkkt itdfwylscg llfpkgeryt qvdwdkktrn iwsapypthl llsmvstpvm nesklnitnt qtpslygfsp fhggmdrimt iirdsldnde dlvmiyadni yilqdntwys idlekgeanc tpqhmqammy ylltrgwtne dgsprynptw atfamnvaps mvvdsscllm nlqlktygqg sgnaftflnn hlmstivvae wvkagkpnpm tkefmdleek tginfkiere lknlretive avetapqdgy ladgsdlppi rpgkaveldl lgwsaiysrq memfvpvlen erliasaayp kglenkalar kpgaeiayqi vryeairlvg gwnnplleta akhmsldkrk rlevkgidvt gflddwnnms efggdlegit lsepltnqtl vdintpldsf dPKARPQTPR SPKKTLdevt taitsgtykd pksavwrlld qrtklrvstl rdqalalkpa sssvdnwaea teelaqqqql lmkannllks sltetreale tiqsdkiiag ksnpeknpgt aanpvvgyge fsekipltpT QKKNAKRREK QRRNQ
| JOB-ID | P22173_032635Zws9638AAQEAAGAHxW0AAABG |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P22173 |
| Description | sp|P22173|RDRP_IPNVJ RNA-directed RNA polymerase OS=Infectious pancreatic necrosis virus (strain Jasper) OX=11003 GN=VP1 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 845 |
| Download predictions | smoothed scores raw scores |