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>P23008_LOOPS
1-56, 62-94, 104-149, 154-188, 199-324, 329-370, 381-395, 419-426, 465-480, 498-517, 525-541, 556-575, 585-623, 641-666, 686-709, 715-757, 767-781, 812-843, 853-862, 898-946, 952-970, 976-984, 1068-1077, 1173-1182, 1203-1226, 1236-1258, 1263-1274, 1282-1386, 1415-1454, 1488-1580, 1600-1627, 1647-1661, 1669-1680, 1691-1746, 1781-1828, 1841-1849, 1857-1877, 1886-1937, 1961-1986, 2005-2023, 2040-2102, 2130-2154
MGAQVSRQNV GTHSTQNSVS NGSSLNYFNI NYFKDAASSG ASRLDFSQDP SKFTDPvkdv lEKGIPTLQS PSVEACGYSD RIMQITRGDS TITSqdvana vvgYGVWPHY LTPQDATAID KPTQPDTSSN RFYTLESKHW NGSSKGWWWk lpdALKDMGI FGENMYYHFL GRSGYTVHVQ CNASKFHQgt llvamipeHQ LASAKHGSVT AGYKLTHPGE AGRDVSQERD ASLRQPSDDS WLNFDGTLLG NLLIFPHQFI NLRSNNSATL IVPYVNAVPM DSMLRHNNWS LVIIPISPLR SETTSSNIVP ITVSISPMCA EFSGarakNI KQGLPVYITP GSGQFMTTDD MQSPCALPWY HPTKEISIPG evknliemcq VDTLIPVNNV GNNVGnvsmy tvqlgnqtgm aqkvfsikVD ITSQPLattl igeiasyyth wtgslrfsfm fcgtanttlk lllaYTPPGI DEPTTRKDAM lgthvvwdvg lqstislVVP WVSASHFRLT ADNKYSMagy itcwYQTNLV VPPSTPQTAD Mlcfvsackd fclrmARDTD LHIQSGPIEQ NPVENyidev lnevLVVPNI KESHHTTSNS APLLDAAETG HTSNVQPEDA IETryvitsq trdemsiesf LGRSGCVHIS RIKVDYTDYN GQDINFtkwk itlqemaqir rkfelFTYVR FDSEITLVPC IAGRGDDIGh ivmqYMYVPP GAPIPSKRND FSWQSGTNMS IFWQHGQPFP RFSLPFLsia sayymfYDGY DGDNTSSKYG Svvtndmgti csrivtekqk hsvvitthiy hKAKHTKAWC PRPPRAVPYT HSHVTNYMPE TGDvttaivr rnTITTAGPS DLyvhvgnli yrnlhlfnse mhdsilisys sdliiyrTNT IGDDYIPNCN CTEATYYCRH KNRYYPIKVT PHDWYEIQES EYYPKHiqyn lLIGEGPCEP GDCGGKLLCR hgvigIITAG GEGHvafidl rqfhcaeeqg itdyihmlge afgngfvdsv keqinainpi nniskkvikw llriisamvi iirnssdpqt iiatltlIGC NGSPWRFlke kfckwtqlty ihkesdswlk kftemcnaar glewignkis kfidwmksml pqaqlkvkyl neikklslle kqienlraad satqekikce idTLHDLSCK FLplyaheak rikvlynkcs niIKQRKRSE PVAVMIHGPP GTGKSIttnf larmiTNESD VYSLPPDPKY FDGYDNQSvv imDDIMQNPD GEDMtlfcqm vSSVTFIPPM ADLPDKGKPF DSRFILCSTN HSLLAPPTIS SLPAMNRRFF FDLDIVVHDN YKDTQGKLDV SKAFRPCNVN TKIGNAKCCP FVCGKAVFKD RSTCSTytla qvynhileed krrrqvvdvm saifQGPISL DPPPPAIDLL QSVRTPEVIK YCQDNKWVIP AECQverdln iansiiaiia niisiagiif viyklfcSLQ GPYSGEPKPK TKVPERRVVA QGPEEEFGRS ILKNNTCVIT TGNGKFTGLG IHDRILIIPT HADPGREVQV NGVHTKVLDS YDLYNRDGVK leitviqldr nekfrdirkY IPETEDDYPE CNLALSANQD EPTIIKVgdv vsygnillsg nqtarmLKYN YPTKSGYCGG VlykigqiLG IHVGGNGRDG fsamllrsyf TDTQGQIKVN KHATECGLPT IHTPSKTKLQ PSVFYDVFPG SKEPAVLTDN DPRLEVnfke alfskykgnv ecnlnehmei aiahysaqlm TLDIDSRPIA LEDSVFGIEG LEALDLNTSA GFPYVTMGIK KRDLINNKtk disrlkeald KYGVDLPMIt flkdelRKKE KISTGKTRVI EASSINDtil frttfGNLFS KFHLNPGVVT GSAVGCDPET FWSKIPVMLD GDCIMAFDYT NYDGSIHpvw fqalkkvlen lsfqsnlidr LCYSKHLFKS TYYEVAGGVP SGCSGTsifn tminniiirt lvldAYKNID LDKLKIIAYG DDVifsykyt ldmeaianeG KKYGLTITPA DKSNEFKKLD YSNVTFLKRG FKQDERHTFL IHPTFPVEEI HESIRWTKKP SQmqehvlsl chlmwhngrk vyedfsskiR SVSAGRALYI PPYDLLKHEW YEKF
>P23008_HOTLOOPS
1-24, 63-77, 138-147, 610-622, 654-662, 795-803, 810-825, 855-863, 900-909, 1026-1033, 1203-1226, 1361-1371, 1415-1425, 1494-1506, 1511-1527, 1551-1562, 1567-1579, 1584-1595, 1601-1610, 1708-1721, 1734-1743, 1816-1829, 1838-1878, 2047-2060, 2131-2154
MGAQVSRQNV GTHSTQNSVS NGSSlnyfni nyfkdaassg asrldfsqdp skftdpvkdv leKGIPTLQS PSVEACGysd rimqitrgds titsqdvana vvgygvwphy ltpqdataid kptqpdtssn rfytlesKHW NGSSKGWwwk lpdalkdmgi fgenmyyhfl grsgytvhvq cnaskfhqgt llvamipehq lasakhgsvt agyklthpge agrdvsqerd aslrqpsdds wlnfdgtllg nllifphqfi nlrsnnsatl ivpyvnavpm dsmlrhnnws lviipisplr settssnivp itvsispmca efsgarakni kqglpvyitp gsgqfmttdd mqspcalpwy hptkeisipg evknliemcq vdtlipvnnv gnnvgnvsmy tvqlgnqtgm aqkvfsikvd itsqplattl igeiasyyth wtgslrfsfm fcgtanttlk lllaytppgi depttrkdam lgthvvwdvg lqstislvvp wvsashfrlt adnkysmagy itcwyqtnlv vppstpqtad mlcfvsackd fclrmardtd lhiqsgpieq npvenyidev lnevlvvpni keshhttsns aplldaaetG HTSNVQPEDA IEtryvitsq trdemsiesf lgrsgcvhis rikVDYTDYN GQdinftkwk itlqemaqir rkfelftyvr fdseitlvpc iagrgddigh ivmqymyvpp gapipskrnd fswqsgtnms ifwqhgqpfp rfslpflsia sayymfydgy dgdntsskyg svvtndmgti csriVTEKQK HSVvitthiY HKAKHTKAWC PRPPRavpyt hshvtnympe tgdvttaivr rntiTTAGPS DLYvhvgnli yrnlhlfnse mhdsilisys sdliiyrtnT IGDDYIPNCn cteatyycrh knryypikvt phdwyeiqes eyypkhiqyn lligegpcep gdcggkllcr hgvigiitag geghvafidl rqfhcaeeqg itdyihmlge afgngfvdsv keqinAINPI NNIskkvikw llriisamvi iirnssdpqt iiatltligc ngspwrflke kfckwtqlty ihkesdswlk kftemcnaar glewignkis kfidwmksml pqaqlkvkyl neikklslle kqienlraad satqekikce idtlhdlsck flplyaheak rikvlynkcs niIKQRKRSE PVAVMIHGPP GTGKSIttnf larmitnesd vyslppdpky fdgydnqsvv imddimqnpd gedmtlfcqm vssvtfippm adlpdkgkpf dsrfilcstn hsllapptis slpamnrrff fdldivvhdn ykdtqgkldv skafrpcnvn TKIGNAKCCP Fvcgkavfkd rstcstytla qvynhileed krrrqvvdvm saifQGPISL DPPPPaidll qsvrtpevik ycqdnkwvip aecqverdln iansiiaiia niisiagiif viyklfcslq gpySGEPKPK TKVPERrvva QGPEEEFGRS ILKNNTCvit tgngkftglg ihdriliipt HADPGREVQV NGvhtkVLDS YDLYNRDGVk leiTVIQLDR NEKFRdirky IPETEDDYPE cnlalsanqd eptiikvgdv vsygnillsg nqtarmlkyn yptksgycgg vlykigqilg ihvggngrdg fsamllrsyf tdtqgqikvn khatecgLPT IHTPSKTKLQ Psvfydvfpg skePAVLTDN DPRlevnfke alfskykgnv ecnlnehmei aiahysaqlm tldidsrpia ledsvfgieg lealdlntsa gfpyvTMGIK KRDLINNKTk disrlkeALD KYGVDLPMIT FLKDELRKKE KISTGKTRVI EASSINDTil frttfgnlfs kfhlnpgvvt gsavgcdpet fwskipvmld gdcimafdyt nydgsihpvw fqalkkvlen lsfqsnlidr lcyskhlfks tyyevaggvp sgcsgtsifn tminniiirt lvldayknid ldklkiiayg ddvifsykyt ldmeaianeg kkygltITPA DKSNEFKKLD ysnvtflkrg fkqderhtfl ihptfpveei hesirwtkkp sqmqehvlsl chlmwhngrk vyedfsskir SVSAGRALYI PPYDLLKHEW YEKF
>P23008_REM465
1-18, 221-235, 810-817, 1495-1507
MGAQVSRQNV GTHSTQNSvs ngsslnyfni nyfkdaassg asrldfsqdp skftdpvkdv lekgiptlqs psveacgysd rimqitrgds titsqdvana vvgygvwphy ltpqdataid kptqpdtssn rfytleskhw ngsskgwwwk lpdalkdmgi fgenmyyhfl grsgytvhvq cnaskfhqgt llvamipehq lasakhgsvt agyklthpge AGRDVSQERD ASLRQpsdds wlnfdgtllg nllifphqfi nlrsnnsatl ivpyvnavpm dsmlrhnnws lviipisplr settssnivp itvsispmca efsgarakni kqglpvyitp gsgqfmttdd mqspcalpwy hptkeisipg evknliemcq vdtlipvnnv gnnvgnvsmy tvqlgnqtgm aqkvfsikvd itsqplattl igeiasyyth wtgslrfsfm fcgtanttlk lllaytppgi depttrkdam lgthvvwdvg lqstislvvp wvsashfrlt adnkysmagy itcwyqtnlv vppstpqtad mlcfvsackd fclrmardtd lhiqsgpieq npvenyidev lnevlvvpni keshhttsns aplldaaetg htsnvqpeda ietryvitsq trdemsiesf lgrsgcvhis rikvdytdyn gqdinftkwk itlqemaqir rkfelftyvr fdseitlvpc iagrgddigh ivmqymyvpp gapipskrnd fswqsgtnms ifwqhgqpfp rfslpflsia sayymfydgy dgdntsskyg svvtndmgti csrivtekqk hsvvitthiY HKAKHTKawc prppravpyt hshvtnympe tgdvttaivr rntittagps dlyvhvgnli yrnlhlfnse mhdsilisys sdliiyrtnt igddyipncn cteatyycrh knryypikvt phdwyeiqes eyypkhiqyn lligegpcep gdcggkllcr hgvigiitag geghvafidl rqfhcaeeqg itdyihmlge afgngfvdsv keqinainpi nniskkvikw llriisamvi iirnssdpqt iiatltligc ngspwrflke kfckwtqlty ihkesdswlk kftemcnaar glewignkis kfidwmksml pqaqlkvkyl neikklslle kqienlraad satqekikce idtlhdlsck flplyaheak rikvlynkcs niikqrkrse pvavmihgpp gtgksittnf larmitnesd vyslppdpky fdgydnqsvv imddimqnpd gedmtlfcqm vssvtfippm adlpdkgkpf dsrfilcstn hsllapptis slpamnrrff fdldivvhdn ykdtqgkldv skafrpcnvn tkignakccp fvcgkavfkd rstcstytla qvynhileed krrrqvvdvm saifqgpisl dppppaidll qsvrtpevik ycqdnkwvip aecqverdln iansiiaiia niisiagiif viyklfcslq gpysGEPKPK TKVPERRvva qgpeeefgrs ilknntcvit tgngkftglg ihdriliipt hadpgrevqv ngvhtkvlds ydlynrdgvk leitviqldr nekfrdirky ipeteddype cnlalsanqd eptiikvgdv vsygnillsg nqtarmlkyn yptksgycgg vlykigqilg ihvggngrdg fsamllrsyf tdtqgqikvn khatecglpt ihtpsktklq psvfydvfpg skepavltdn dprlevnfke alfskykgnv ecnlnehmei aiahysaqlm tldidsrpia ledsvfgieg lealdlntsa gfpyvtmgik krdlinnktk disrlkeald kygvdlpmit flkdelrkke kistgktrvi eassindtil frttfgnlfs kfhlnpgvvt gsavgcdpet fwskipvmld gdcimafdyt nydgsihpvw fqalkkvlen lsfqsnlidr lcyskhlfks tyyevaggvp sgcsgtsifn tminniiirt lvldayknid ldklkiiayg ddvifsykyt ldmeaianeg kkygltitpa dksnefkkld ysnvtflkrg fkqderhtfl ihptfpveei hesirwtkkp sqmqehvlsl chlmwhngrk vyedfsskir svsagralyi ppydllkhew yekf
| JOB-ID | P23008_134602Zt78Gn8AAQEAABReA6MAAAAU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P23008 |
| Description | sp|P23008|POLG_HRV1A Genome polyprotein OS=Human rhinovirus 1A OX=12134 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 2154 |
| Download predictions | smoothed scores raw scores |