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>P24736_LOOPS
1-29, 42-53, 121-146, 157-179, 207-236, 245-257, 273-290, 346-354, 374-418, 429-493
MGARASVLSG KKLDSWEKIR LRPGGNKKYr lkhlvwasre lEKFTLNPGL LETaegcqqi lgqlqpalqt gteelrslyn tvavlycvhq ridvkdtkea lnkieemqnk nkqrtqqaaa NTGSSQNYPI VQNAQGQPVH QALSPRtlna wvkvveDKAF SPEVIPMFSA LSEGATPQDl nmmlnvvggh qaamqmlkdt ineeaaEWDR LHPVHAGPIP PGQMREPRGS DIAGTTstvq eqigWMTGNP PIPVGDIyrr wiilglnkiv rmYSPVSILD IRQGPKEPFR dyvdrffktl raeqatqdvk nwmtetllvq nanpdcksil ralgpgatle emmtaCQGVG GPGHkarvla eamsqvqqts immQRGNFRG PRRIKCFNCG KEGHLAKNCR APRKKGCWKC GKEGHQMKdc terqanflGK IWPSNKGRPG NFPQSRPEPT APPAEIFGMG EKMTSPAKQE LKDREQTPLV SLKSLFGNDP LSQ
>P24736_HOTLOOPS
1-30, 245-254, 278-288, 319-326, 372-381, 393-404, 471-493
MGARASVLSG KKLDSWEKIR LRPGGNKKYR lkhlvwasre lekftlnpgl letaegcqqi lgqlqpalqt gteelrslyn tvavlycvhq ridvkdtkea lnkieemqnk nkqrtqqaaa ntgssqnypi vqnaqgqpvh qalsprtlna wvkvvedkaf spevipmfsa lsegatpqdl nmmlnvvggh qaamqmlkdt ineeaaewdr lhpvhagpip pgqmreprgs diagttstvq eqigWMTGNP PIPVgdiyrr wiilglnkiv rmyspvsILD IRQGPKEPfr dyvdrffktl raeqatqdvk nwmtetllVQ NANPDCksil ralgpgatle emmtacqgvg gpghkarvla eamsqvqqts iMMQRGNFRG Prrikcfncg keGHLAKNCR APRKkgcwkc gkeghqmkdc terqanflgk iwpsnkgrpg nfpqsrpept appaeifgmg ekmtspakqe LKDREQTPLV SLKSLFGNDP LSQ
>P24736_REM465
1-10, 108-123
MGARASVLSG kkldswekir lrpggnkkyr lkhlvwasre lekftlnpgl letaegcqqi lgqlqpalqt gteelrslyn tvavlycvhq ridvkdtkea lnkieemQNK NKQRTQQAAA NTGssqnypi vqnaqgqpvh qalsprtlna wvkvvedkaf spevipmfsa lsegatpqdl nmmlnvvggh qaamqmlkdt ineeaaewdr lhpvhagpip pgqmreprgs diagttstvq eqigwmtgnp pipvgdiyrr wiilglnkiv rmyspvsild irqgpkepfr dyvdrffktl raeqatqdvk nwmtetllvq nanpdcksil ralgpgatle emmtacqgvg gpghkarvla eamsqvqqts immqrgnfrg prrikcfncg keghlakncr aprkkgcwkc gkeghqmkdc terqanflgk iwpsnkgrpg nfpqsrpept appaeifgmg ekmtspakqe lkdreqtplv slkslfgndp lsq
| JOB-ID | P24736_051004ZukPLH8AAQEAADCTkIQAAABP |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P24736 |
| Description | sp|P24736|GAG_HV1U4 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype A (isolate U455) OX=11703 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 493 |
| Download predictions | smoothed scores raw scores |