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>P24740_LOOPS
1-29, 42-53, 121-146, 157-179, 207-236, 245-257, 273-290, 346-354, 374-418, 436-493, 506-531, 550-567, 573-607, 623-653, 670-740, 746-758, 766-775, 792-834, 889-902, 925-944, 962-973, 990-1003, 1010-1044, 1067-1080, 1086-1095, 1114-1126, 1160-1171, 1184-1208, 1222-1235, 1246-1261, 1276-1289, 1325-1336, 1365-1402, 1412-1428
MGARASVLSG KKLDSWEKIR LRPGGNKKYr lkhlvwasre lEKFTLNPGL LETaegcqqi lgqlqpalqt gteelrslyn tvavlycvhq ridvkdtkea lnkieemqnk nkqrtqqaaa NTGSSQNYPI VQNAQGQPVH QALSPRtlna wvkvveDKAF SPEVIPMFSA LSEGATPQDl nmmlnvvggh qaamqmlkdt ineeaaEWDR LHPVHAGPIP PGQMREPRGS DIAGTTstvq eqigWMTGNP PIPVGDIyrr wiilglnkiv rmYSPVSILD IRQGPKEPFR dyvdrffktl raeqatqdvk nwmtetllvq nanpdcksil ralgpgatle emmtaCQGVG GPGHkarvla eamsqvqqts immQRGNFRG PRRIKCFNCG KEGHLAKNCR APRKKGCWKC GKEGHQMKdc terqanflre nlafqQGEAR EFSSEQTRAN SPTSRNLWDG GKDDLPCETG AERQGTDSFS FPQITLWQRP LVTvkiggql ieallDTGAD DTVLEDINLP GKWKPKIIGG Iggfikvrqy dqilieicgK KTIGTVLVGP TPVNIIGrnm ltQIGCTLNF PISPIETVPV KLKPEMDGPK VKQWPLTeek ikalteicne meKEGKISKI GPENPYNTPV FAIKKKDSTK WRKlvdfrel nkrtqdfweV QLGIPHTAGL KKKKSVTVLD VGDAYFSVPL DESFRKYTAF TIPSINNETP GVRYQYNVLP QGWKGSPSIF qssmtKILEP FRSQHPDIvi yqymdDLYVG SDLEIgqhra kieelrahll sWGFITPDKK HQKEPPFLWM GYELHPDKWT VQPIQLPEKD SWTVndiqkl vgklnwasqi yagikvkqlc kllrgakalt divtlteeae lelaenreIL KDPVHGVYYD PSkdlvaeiq kqgqdqwtyq iyqePFKNLK TGKYARKRSA HTNDvkqlte vvqkvstesi vIWGKIPKFR LPIqketwea wwmeywqatW IPEWEFVNTP PLVklwyqlE KDPIAGAETF YVDGAANRET KLGKAGYVTD RGRQkvvslt ettnqktelh aihlalQDSG SEVNIVTDSQ yalgiIQAQP DRSESeivnq iiekliekek vylSWVPAHK GIGGNEqvdk lvssgirkvl fldgidkaqe dhekyhcnwR AMASDFNLPP Vvakeivasc nkcQLKGEAM HGQVDCSPGI WQLDCTHLeg kvilvavhva sGYIEAEVIP AETGQetayf ilklaGRWPV KVIHTDNGSN Ftsaavkavc wwaniQQEFG IPYNPQSQGv vesmnkelkk iigqvreqae hlktavqmav fihnFKRKGG IGGYSAgeri idiiatdiqt kelqkqiski qnfrVYYRDS RDPIWKGPAK LLWKGEGAVV IQDNSDIKVV PRrkakiird yGKQMAGDDC MAGRQDED
>P24740_HOTLOOPS
1-30, 245-254, 278-288, 319-326, 372-381, 393-404, 439-462, 515-528, 549-557, 587-608, 624-652, 658-688, 711-721, 883-894, 937-950, 956-971, 1021-1044, 1050-1057, 1087-1095, 1384-1428
MGARASVLSG KKLDSWEKIR LRPGGNKKYR lkhlvwasre lekftlnpgl letaegcqqi lgqlqpalqt gteelrslyn tvavlycvhq ridvkdtkea lnkieemqnk nkqrtqqaaa ntgssqnypi vqnaqgqpvh qalsprtlna wvkvvedkaf spevipmfsa lsegatpqdl nmmlnvvggh qaamqmlkdt ineeaaewdr lhpvhagpip pgqmreprgs diagttstvq eqigWMTGNP PIPVgdiyrr wiilglnkiv rmyspvsILD IRQGPKEPfr dyvdrffktl raeqatqdvk nwmtetllVQ NANPDCksil ralgpgatle emmtacqgvg gpghkarvla eamsqvqqts iMMQRGNFRG Prrikcfncg keGHLAKNCR APRKkgcwkc gkeghqmkdc terqanflre nlafqqgeAR EFSSEQTRAN SPTSRNLWDG GKddlpcetg aerqgtdsfs fpqitlwqrp lvtvkiggql iealldtgad dtvlEDINLP GKWKPKIIgg iggfikvrqy dqilieicGK KTIGTVLvgp tpvniigrnm ltqigctlnf pispieTVPV KLKPEMDGPK VKQWPLTEek ikalteicne mekEGKISKI GPENPYNTPV FAIKKKDSTK WRklvdfREL NKRTQDFWEV QLGIPHTAGL KKKKSVTVld vgdayfsvpl desfrkytaf TIPSINNETP Gvryqynvlp qgwkgspsif qssmtkilep frsqhpdivi yqymddlyvg sdleigqhra kieelrahll swgfitpdkk hqkeppflwm gyelhpdkwt vqpiqlpekd swtvndiqkl vgklnwasqi yagikvkqlc kllrgakalt divtlteeae leLAENREIL KDPVhgvyyd pskdlvaeiq kqgqdqwtyq iyqepfknlk tgkyarKRSA HTNDVKQLTE vvqkvSTESI VIWGKIPKFR Lpiqketwea wwmeywqatw ipewefvntp plvklwyqle kdpiagaetf YVDGAANRET KLGKAGYVTD RGRQkvvslT ETTNQKTelh aihlalqdsg sevnivtdsq yalgiiQAQP DRSESeivnq iiekliekek vylswvpahk giggneqvdk lvssgirkvl fldgidkaqe dhekyhcnwr amasdfnlpp vvakeivasc nkcqlkgeam hgqvdcspgi wqldcthleg kvilvavhva sgyieaevip aetgqetayf ilklagrwpv kvihtdngsn ftsaavkavc wwaniqqefg ipynpqsqgv vesmnkelkk iigqvreqae hlktavqmav fihnfkrkgg iggysageri idiiatdiqt kelqkqiski qnfrvyyrds rdpiwkgpak llwKGEGAVV IQDNSDIKVV PRRKAKIIRD YGKQMAGDDC MAGRQDED
>P24740_REM465
1-10, 108-123, 437-454, 1351-1360
MGARASVLSG kkldswekir lrpggnkkyr lkhlvwasre lekftlnpgl letaegcqqi lgqlqpalqt gteelrslyn tvavlycvhq ridvkdtkea lnkieemQNK NKQRTQQAAA NTGssqnypi vqnaqgqpvh qalsprtlna wvkvvedkaf spevipmfsa lsegatpqdl nmmlnvvggh qaamqmlkdt ineeaaewdr lhpvhagpip pgqmreprgs diagttstvq eqigwmtgnp pipvgdiyrr wiilglnkiv rmyspvsild irqgpkepfr dyvdrffktl raeqatqdvk nwmtetllvq nanpdcksil ralgpgatle emmtacqgvg gpghkarvla eamsqvqqts immqrgnfrg prrikcfncg keghlakncr aprkkgcwkc gkeghqmkdc terqanflre nlafqqGEAR EFSSEQTRAN SPTSrnlwdg gkddlpcetg aerqgtdsfs fpqitlwqrp lvtvkiggql iealldtgad dtvledinlp gkwkpkiigg iggfikvrqy dqilieicgk ktigtvlvgp tpvniigrnm ltqigctlnf pispietvpv klkpemdgpk vkqwplteek ikalteicne mekegkiski gpenpyntpv faikkkdstk wrklvdfrel nkrtqdfwev qlgiphtagl kkkksvtvld vgdayfsvpl desfrkytaf tipsinnetp gvryqynvlp qgwkgspsif qssmtkilep frsqhpdivi yqymddlyvg sdleigqhra kieelrahll swgfitpdkk hqkeppflwm gyelhpdkwt vqpiqlpekd swtvndiqkl vgklnwasqi yagikvkqlc kllrgakalt divtlteeae lelaenreil kdpvhgvyyd pskdlvaeiq kqgqdqwtyq iyqepfknlk tgkyarkrsa htndvkqlte vvqkvstesi viwgkipkfr lpiqketwea wwmeywqatw ipewefvntp plvklwyqle kdpiagaetf yvdgaanret klgkagyvtd rgrqkvvslt ettnqktelh aihlalqdsg sevnivtdsq yalgiiqaqp drseseivnq iiekliekek vylswvpahk giggneqvdk lvssgirkvl fldgidkaqe dhekyhcnwr amasdfnlpp vvakeivasc nkcqlkgeam hgqvdcspgi wqldcthleg kvilvavhva sgyieaevip aetgqetayf ilklagrwpv kvihtdngsn ftsaavkavc wwaniqqefg ipynpqsqgv vesmnkelkk iigqvreqae hlktavqmav fihnfkrkgg iggysageri idiiatdiqt KELQKQISKI qnfrvyyrds rdpiwkgpak llwkgegavv iqdnsdikvv prrkakiird ygkqmagddc magrqded
| JOB-ID | P24740_045201ZukK8X8AAQEAADCSG7YAAAAB |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P24740 |
| Description | sp|P24740|POL_HV1U4 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype A (isolate U455) OX=11703 GN=gag-pol PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 1428 |
| Download predictions | smoothed scores raw scores |