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>P27395_LOOPS
1-11, 19-27, 100-110, 142-239, 271-278, 291-312, 322-336, 355-432, 439-493, 512-526, 571-581, 590-613, 620-652, 664-698, 714-727, 792-817, 880-899, 917-953, 968-980, 1010-1137, 1145-1156, 1289-1299, 1350-1359, 1365-1378, 1394-1403, 1441-1467, 1479-1489, 1500-1525, 1559-1599, 1606-1666, 1671-1689, 1696-1707, 1742-1761, 1771-1800, 1819-1851, 1893-1908, 1917-1992, 2001-2031, 2058-2082, 2091-2103, 2134-2142, 2219-2227, 2241-2253, 2287-2323, 2345-2365, 2425-2443, 2458-2467, 2481-2509, 2518-2535, 2572-2585, 2596-2613, 2628-2647, 2653-2685, 2697-2708, 2730-2746, 2770-2801, 2819-2846, 2870-2900, 2915-2924, 2947-2961, 2969-2976, 2981-3000, 3019-3042, 3053-3074, 3109-3118, 3125-3132, 3155-3171, 3191-3203, 3224-3244, 3251-3282, 3314-3338, 3353-3388
MTKKPGGPGK NrainmlkRG LPRVFPLvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgt lidavnkrgR KQNKRGGNEG simwlaslav viacagamkl snfqgkllmt iNNTDIADVI VIPTSKGENR CWVRAIDVGY MCEDTITYEC PKLTMGNDPE DVDCWCDNQE VYVQYGRCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLd stkatrylmk tenwiirnpg yaflaavlgw MLGSNNGQrv vftillllva PAYSFNCLGM GNRDFIEGAS GAtwvdlvle gDSCLTIMAN DKPTLDvrmi nieasqlaev rsycYHASVT DISTVARCPT TGEAHNEKRA DSSYVCKQGF TDRGWGNGCG LFGKGSIDTC AKFSCTSKAI GRTIQPENIK YEvgifvhGT TTSENHGNYS AQVGASQAAK FTVTPNAPSI TLKLGDYGEV TLDCEPRSGL NTEafyvmtv gsksflvhre wFHDLALPWT SPSSTAwrnr ellmefegah atkqsvvalg sqegglhqal agaivveyss SVKLTSGHLK CrlkmdklaL KGTTYGMCTE KFSFAKNPVD TGHgtvvieL SYSGSDGPCK IPIVSVASLN DMTPVGRLVT VNpfvatssa nskVLVEMEP PFGDSYIVVG RGDKQINHHW HKAGSTLGka fsttlkgaqr laaLGDTAWD FGSIGGVfns igravhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nVHADTGCAI DITRKEMRCG SGIFVHNdve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdL SVVVNKPVGR YRSAPKRLSm tqekfemgwk awgksiLFAP ELANSTFVVD GPETKECPDE HRAWNSMQIE DFGfgitstr vwlkireEST DECDGAIIGT avkghvavhs dlsywiesry ndtwkleraV FGEVKSCTWP ETHTLWGDDV EESELIIPHT IAGPKSKHNR REGYKTQNQG PWDENGIVLD FDYCPGTKVT ITEDCSKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFRTE NGCWYGMEIR PVMHDETtlv rsqvDAFKGE MVDPFQlgll vmflatqevl rkrwtarlti pavlgvllvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vilvlgaaff qlasvdlqig vhgilnaaai awmivraiTF PTTSSVTMPv lalltpgmra lyldtyriil lvigicsllh erkktmakkk gavllglalT STGWFSPTTi aaglMVCNPN KKRGWPATef lsavglmfai vggLAELDIE SMSipfmlag lmavsyvvsg katdmwlera adiswemdaa ITGSSRRLDV KLDDDGDFHL IDDPGVPwkv wvlrmsciGL AALTPWAIVp aafgywltlK TTKRGGVFWD TPSPKPCSKG DTTTGvyrim argilgtyqa gvgvmyenvf htlwhttrGA AIMSGEGKLT PYWGSVREDR IAYGGPWRFD RKWNGTDDVq vivvePGKAA VNIQTKPGVF RTPFGEVGAV SLDYPRGTSG SPILDSNGDI IGLYGNGVEL GDGSYVsaiv QGDRQEEPVP EAYTPNMLRk rqmtvLDLHP GSGKTRKilp qiikdaiqqr lrtavlaptr vvaaemaeal rGLPVRYQTS AVQREHQGNE Ivdvmchatl THRLMSPNRV PNYNLFVMDE AHFTDPASIA argyiatkve lgeaaaifMT ATPPGTTDPF PDSNAPIHDL QDEIPDRAWS Sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrKSYDTEYP KCKNGDWDfv ittdisEMGA NFGASRVIDC RKSVKPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQVGDEYHYG GATSEDDSNL AHwteakiml DNIHMPNGLV AQLYGPEREK AFTMDGEYRL Rgeekknfle llrtadlpvw laykvasNGI QYTDRKWCFD GPRTNAILED NTeveivtrm GERKILKPRW LDArvyadhq alkwfkdfaa gkrsavsfie vlgRMPEHFM GKtrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwAA EVPGTKIagt llialllmvv LIPEPEKQRS QTDnqlavfl icvltvvgvv aaneygmlek tkadlkSMFG GKTQASGLTG LPSMALDLRP ATAWALYGGS TVVltpllkh litseyvtts lasiNSQAGS LFVLPRGVPF TDLDLtvglv flgcwgqitl ttfltamvla tlhygymlpg wqaealraaq rrtaagimkn avvdGMVATD VPELERTTPL MQKkvgqvll igvsvaaFLV NPNVTTVrea gvlvtaatlt LWDNGASAVW NSTTATGLCH VMRGSYLAGg siawtliKNA DKPSLKRGRP GGRTLgeqwk eklnamsree ffkyrreaii evdrtearra rRENNIVGGH PVSRGsaklr wlvekGFVSP IGKVIDLGCG RGGwsyyaat lkkvqevRGY TKGGAGHEEP MLMQSYGwnl vsLKSGVDVF YKPSEPSDTL FCDIGESSPS PEVEEqrtlr vlemtsDWLH RGPREFCIkv lcpympkvie kmevlqrrfG GGLVRLPLSR NSNHEMywvs gaagnvvhav nmtsqvllgR MDRTVWRGPK YEEDVNLGSG TRAVGKGEVH Snqekikkri qklkeefaTT WHKDPEHPYR TWTYHGSYEV KATGSAsslv ngvvelmskp wdaianvttM AMTDTTPFGQ QRVFKEKVDT KAPEPPAGAK evlnettnwl wahlSREKRP RLCTkeefik kvnsnaalga vfaeqnQWST AREAVDDPRF WemvdeerEN HLRGEChtci YNMMGKREKK PGEFGKAKGS raiwfmwlga rylefealGF LNEDHWLSRE NSGGGVEGSG VQklgyilrd iaGKQGGKMY ADDTAGWDTR ITRTdlenea kvlelldgeh rmlaraiiel tyrhkvvkVM RPAAEGKTvm dvisREDQRG SGqvvtyaln tftniavqlv rlmeAEGVIG PQHLEQLPRK Tkiavrtwlf engeervtrm AISGDDCVVK PLDdrfatal hflnamskvr kdiQEWKPSH GWHDWQQVPF CSNHfqeivm KDGRSIVVPC RGQDELIGRA RISPGAGWNV KDtaclakay aqmwlllyfh rrdlrlmana icsAVPVDWV PTGRTSWSIH SKGEWMTTed mlqvwnrvwi eeNEWMMDKT PITSWTDVPY VGKREDIWCG SLIGTRSRat waeniyaain qvravigken yvdymtslrr yedvliqedr vi
>P27395_HOTLOOPS
1-26, 90-112, 150-163, 206-241, 374-385, 419-430, 516-523, 574-584, 604-612, 875-902, 1040-1051, 1056-1067, 1080-1117, 1505-1524, 1584-1594, 1609-1623, 1671-1689, 1698-1708, 1894-1906, 1921-1930, 1936-1972, 2073-2100, 2517-2539, 2558-2587, 2672-2687, 2695-2704, 2778-2806, 2818-2830, 2892-2904, 2913-2923, 2943-2955, 2967-2976, 3100-3122, 3159-3172, 3181-3198, 3267-3279, 3315-3339, 3354-3370, 3419-3432
MTKKPGGPGK NRAINMLKRG LPRVFPlvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgT LIDAVNKRGR KQNKRGGNEG SImwlaslav viacagamkl snfqgkllmt inntdiadvI VIPTSKGENR CWVraidvgy mcedtityec pkltmgndpe dvdcwcdnqe vyvqyGRCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLD Stkatrylmk tenwiirnpg yaflaavlgw mlgsnngqrv vftillllva paysfnclgm gnrdfiegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt tgeAHNEKRA DSSYVckqgf tdrgwgngcg lfgkgsidtc akfsctskAI GRTIQPENIK yevgifvhgt ttsenhgnys aqvgasqaak ftvtpnapsi tlklgdygev tldceprsgl nteafyvmtv gsksflvhre wfhdlALPWT SPSstawrnr ellmefegah atkqsvvalg sqegglhqal agaivveyss svkLTSGHLK CRLKmdklal kgttygmcte kfsFAKNPVD TGhgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg rgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igravhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkENAVDL SVVVNKPVGR YRSAPKRLSM TQekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgevksctwp ethtlwgddv eeseliiphT IAGPKSKHNR RegykTQNQG PWDENGIvld fdycpgtkvT ITEDCSKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFrte ngcwygmeir pvmhdettlv rsqvdafkge mvdpfqlgll vmflatqevl rkrwtarlti pavlgvllvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vilvlgaaff qlasvdlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigicsllh erkktmakkk gavllglalt stgwfsptti aaglmvcnpn kkrgwpatef lsavglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwlera adiswemdaa itgssrrldv kldddgdfhl iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrGGVFWD TPSPKPCSKG DTTTgvyrim argilgtyqa gvgvmyenvf htlwhttrga aimsgegklt pywgsvredr iayGGPWRFD RKWNgtddvq vivvepgkAA VNIQTKPGVF RTPfgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv QGDRQEEPVP EAYTPNMLRk rqmtvldLHP GSGKTRKIlp qiikdaiqqr lrtavlaptr vvaaemaeal rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdeipdraws sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrkSYDTEYP KCKNGDwdfv ittdisemga NFGASRVIDC rksvkPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gpRTNAILED NTEVEIVTRM GERKILKPRW ldarvyadhq alkwfkdfaa gkrsavsfie vlgrmpehfm gktrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqrs qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfg gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqitl ttfltamvla tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelerttpl mqkkvgqvll igvsvaaflv npnvttvrea gvlvtaatlt lwdngasavw nsttatglch vmrgsylagg siawtlIKNA DKPSLKRGRP GGRTLGEQWk eklnamsree ffkyrreAII EVDRTEARRA RRENNIVGGH PVSRGSAklr wlvekgfvsp igkvidlgcg rggwsyyaat lkkvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fCDIGESSPS PEVEEQRtlr vlemTSDWLH RGPRefcikv lcpympkvie kmevlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrGPK YEEDVNLGSG TRAVGKGEVH SNQEKIkkri qklkeefATT WHKDPEHPYR twtyhgsyev katgsasslv ngvvelmskp wdaianvttm amtdttpfgq qrvfkekvdt kAPEPPAGAK EVLNettnwl waHLSREKRP RLCtkeefik kvnsnaalga vfAEQNQWST AREAVddprf wemvdeEREN HLRGEChtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsre nsgggvegsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rmlaraiieL TYRHKVVKVM RPAAEGKTVM DVisredqrg sgqvvtyaln tftniavqlv rlmeaegvIG PQHLEQLPRK TKiavrtwlf ENGEERVTRM AISGDDCVvk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivvpc rgqdelIGRA RISPGAGWNv kdtaclakay aqmwlllyfh rrdlrlmana icsaVPVDWV PTGRTSWSIH SKGEWMTTEd mlqvwnrvwi eenEWMMDKT PITSWTDVPY vgkrediwcg sligtrsrat waeniyaain qvravigken yvdymtslRR YEDVLIQEDR VI
>P27395_REM465
1-8, 99-106, 210-232, 371-381, 1045-1058, 1085-1096, 1957-1965, 2677-2685, 2795-2805, 3030-3037
MTKKPGGPgk nrainmlkrg lprvfplvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgt lidavnkrGR KQNKRGgneg simwlaslav viacagamkl snfqgkllmt inntdiadvi viptskgenr cwvraidvgy mcedtityec pkltmgndpe dvdcwcdnqe vyvqygrctR TRHSKRSRRS VSVQTHGESS LVnkkeawld stkatrylmk tenwiirnpg yaflaavlgw mlgsnngqrv vftillllva paysfnclgm gnrdfiegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt TGEAHNEKRA Dssyvckqgf tdrgwgngcg lfgkgsidtc akfsctskai grtiqpenik yevgifvhgt ttsenhgnys aqvgasqaak ftvtpnapsi tlklgdygev tldceprsgl nteafyvmtv gsksflvhre wfhdlalpwt spsstawrnr ellmefegah atkqsvvalg sqegglhqal agaivveyss svkltsghlk crlkmdklal kgttygmcte kfsfaknpvd tghgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg rgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igravhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdl svvvnkpvgr yrsapkrlsm tqekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgevksctwp ethtlwgddv eeseliipht iagpKSKHNR REGYKTQNqg pwdengivld fdycpgtkvt itedCSKRGP SVRTTTdsgk litdwccrsc slpplrfrte ngcwygmeir pvmhdettlv rsqvdafkge mvdpfqlgll vmflatqevl rkrwtarlti pavlgvllvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vilvlgaaff qlasvdlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigicsllh erkktmakkk gavllglalt stgwfsptti aaglmvcnpn kkrgwpatef lsavglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwlera adiswemdaa itgssrrldv kldddgdfhl iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrggvfwd tpspkpcskg dtttgvyrim argilgtyqa gvgvmyenvf htlwhttrga aimsgegklt pywgsvredr iayggpwrfd rkwngtddvq vivvepgkaa vniqtkpgvf rtpfgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv qgdrqeepvp eaytpnmlrk rqmtvldlhp gsgktrkilp qiikdaiqqr lrtavlaptr vvaaemaeal rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdeipdraws sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrksydteyp kckngdwdfv ittdisemga nfgasrvidc rksvkptile egegrvilgn pspitsASAA QRRGRvgrnp nqvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gprtnailed nteveivtrm gerkilkprw ldarvyadhq alkwfkdfaa gkrsavsfie vlgrmpehfm gktrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqrs qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfg gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqitl ttfltamvla tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelerttpl mqkkvgqvll igvsvaaflv npnvttvrea gvlvtaatlt lwdngasavw nsttatglch vmrgsylagg siawtlikna dkpslkrgrp ggrtlgeqwk eklnamsree ffkyrreaii evdrtearra rrennivggh pvsrgsaklr wlvekgfvsp igkvidlgcg rggwsyyaat lkkvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fcdigeSSPS PEVEEqrtlr vlemtsdwlh rgprefcikv lcpympkvie kmevlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrgpk yeedvnlgsg travGKGEVH SNQEKikkri qklkeefatt whkdpehpyr twtyhgsyev katgsasslv ngvvelmskp wdaianvttm amtdttpfgq qrvfkekvdt kapeppagak evlnettnwl wahlsrekrp rlctkeefik kvnsnaalga vfaeqnqwst areavddprf wemvdeeren hlrgechtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsrE NSGGGVEgsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rmlaraiiel tyrhkvvkvm rpaaegktvm dvisredqrg sgqvvtyaln tftniavqlv rlmeaegvig pqhleqlprk tkiavrtwlf engeervtrm aisgddcvvk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivvpc rgqdeligra rispgagwnv kdtaclakay aqmwlllyfh rrdlrlmana icsavpvdwv ptgrtswsih skgewmtted mlqvwnrvwi eenewmmdkt pitswtdvpy vgkrediwcg sligtrsrat waeniyaain qvravigken yvdymtslrr yedvliqedr vi
| JOB-ID | P27395_124200ZziTF38AAQEAACQmnh4AAABB |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P27395 |
| Description | sp|P27395|POLG_JAEV1 Genome polyprotein OS=Japanese encephalitis virus (strain SA-14) OX=11073 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3432 |
| Download predictions | smoothed scores raw scores |