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>P30130_LOOPS
38-108, 129-140, 152-203, 214-242, 251-301, 315-390, 400-417, 424-433, 440-458, 467-475, 480-529, 539-557, 598-628, 640-667, 672-696, 701-715, 721-785, 804-865
msylnlrlyq rntqclhirk hrlagffvrl vvacafaAQA PLSSADLYFN PRFLADDPQA VADLSRFENG QELPPGTYRV DIYLNNGYMA TRDVTFNTGD SEQGIVPClt raqlasmgln tasvagmnLL ADDACVPLTT mvqdatahld vGQQRLNLTI PQAFMSNRAR GYIPPELWDP GINAGLLNYN FSGNSVQNRI GGNshyayln lqsGLNIGAW RLRDNTTWSY NSSDRSSGSK NKwqhintwl ERDIIPLRSR LTLGDGYTQG DIFDGINFRG AQLASDDNML PDSQRGFAPV Ihgiargtaq vtikQNGYDI YNSTVPPGPF TINDIYAAGN SGDLQVTIKE ADGSTQIFTV PYSSVPLLQR EGHTRYSITA GEYRSGNAQQ ektrffqstL LHGLPAGWTI YGGTQLAdry rafNFGIGKN MGAlgalsvD MTQANSTLPD DSQHDGQSvr flynksLNES GTNIQlvgyR YSTSGYFNFA DTTYSRMNGY NIETQDGVIQ VKPKFTDYYN LAYNKRGKLq ltvtqqlgRT STLYLSGSHQ TYWGTSNvde qfqaglntaf edinwtlsys ltknawqkgr dqmlalnVNI PFSHWLRSDS KSQWRHASAS YSMSHDLNgr mtnlagvygT LLEDNNLSYS VQTGYAGGGD GNSGSTGyat lNYRGGYGNA NIGYSHSDDI KQLYYGvsgg VLAHANGVTL GQPLNdtvvl VKAPGAKDAK VENQTGVRTD WRGYAVLPYA TEYRENRVAL DTNTLADNVD LDNAVANVVP TRGAIvraef karvgikllm tltHNNKPLP FGAMVTSESS QSSGIVADNG QVYLSGMPLA GKVQVKWGEE ENAHCVANYQ LPPESqqqll tqlsaecr
>P30130_HOTLOOPS
66-78, 230-242, 360-370, 447-456, 502-512, 723-743, 776-789
msylnlrlyq rntqclhirk hrlagffvrl vvacafaaqa plssadlyfn prfladdpqa vadlsRFENG QELPPGTYrv diylnngyma trdvtfntgd seqgivpclt raqlasmgln tasvagmnll addacvpltt mvqdatahld vgqqrlnlti pqafmsnrar gyippelwdp ginagllnyn fsgnsvqnri ggnshyayln lqsglnigaw rlrdnttwsY NSSDRSSGSK NKwqhintwl erdiiplrsr ltlgdgytqg difdginfrg aqlasddnml pdsqrgfapv ihgiargtaq vtikqngydi ynstvppgpf tindiyaagn sgdlqvtike adgstqiftV PYSSVPLLQR eghtrysita geyrsgnaqq ektrffqstl lhglpagwti yggtqladry rafnfgigkn mgalgalsvd mtqansTLPD DSQHDGqsvr flynkslnes gtniqlvgyr ystsgyfnfa dttysrmngy nIETQDGVIQ VKpkftdyyn laynkrgklq ltvtqqlgrt stlylsgshq tywgtsnvde qfqaglntaf edinwtlsys ltknawqkgr dqmlalnvni pfshwlrsds ksqwrhasas ysmshdlngr mtnlagvygt llednnlsys vqtgyagggd gnsgstgyat lnyrggygna nigyshsddi kqlyygvsgg vlahangvtl gqplndtvvl vkAPGAKDAK VENQTGVRTD WRGyavlpya teyrenrval dtntladnvd ldnavANVVP TRGAIVRAEf karvgikllm tlthnnkplp fgamvtsess qssgivadng qvylsgmpla gkvqvkwgee enahcvanyq lppesqqqll tqlsaecr
>P30130_REM465
229-241, 447-455, 608-620, 816-823, 870-878
msylnlrlyq rntqclhirk hrlagffvrl vvacafaaqa plssadlyfn prfladdpqa vadlsrfeng qelppgtyrv diylnngyma trdvtfntgd seqgivpclt raqlasmgln tasvagmnll addacvpltt mvqdatahld vgqqrlnlti pqafmsnrar gyippelwdp ginagllnyn fsgnsvqnri ggnshyayln lqsglnigaw rlrdnttwSY NSSDRSSGSK Nkwqhintwl erdiiplrsr ltlgdgytqg difdginfrg aqlasddnml pdsqrgfapv ihgiargtaq vtikqngydi ynstvppgpf tindiyaagn sgdlqvtike adgstqiftv pyssvpllqr eghtrysita geyrsgnaqq ektrffqstl lhglpagwti yggtqladry rafnfgigkn mgalgalsvd mtqansTLPD DSQHDgqsvr flynkslnes gtniqlvgyr ystsgyfnfa dttysrmngy nietqdgviq vkpkftdyyn laynkrgklq ltvtqqlgrt stlylsgshq tywgtsnvde qfqaglntaf edinwtlsys ltknawqkgr dqmlalnvni pfshwlrSDS KSQWRHASAS ysmshdlngr mtnlagvygt llednnlsys vqtgyagggd gnsgstgyat lnyrggygna nigyshsddi kqlyygvsgg vlahangvtl gqplndtvvl vkapgakdak venqtgvrtd wrgyavlpya teyrenrval dtntladnvd ldnavanvvp trgaivraef karvgikllm tlthnnkplp fgamvTSESS QSSgivadng qvylsgmpla gkvqvkwgee enahcvanyq lppesqqqlL TQLSAECR
| JOB-ID | P30130_184733ZunOxX8AAQEAADCTvkIAAABH |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P30130 |
| Description | sp|P30130|FIMD_ECOLI Outer membrane usher protein FimD OS=Escherichia coli (strain K12) OX=83333 GN=fimD PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 878 |
| Download predictions | smoothed scores raw scores |