>P31818_LOOPS
1-13, 33-75, 87-110, 146-172, 178-221, 228-241, 255-263
MGGTISMRRS RSTgdlrqrl lrargetyer llGEVEDGSS QSLGELDKGL SSLSCEGQKY NQEQYMNTPW RNPAEerekl ayrkqnMDDI DEEDDDLVGD TVRPKVPLRT msyklaidms hfikekggle giyysarrhr ildiyLEKEE GIIPDWQDYT SGPGIRYPKT FGwlwklVPV NVSDEAQEDE EHYLMHPAQT SQWDDPWGEV PAWKFDPTLA YtyeayvRYP EEFGSKSGLS Eeevrrrlta rgllNMADKK ETR
>P31818_HOTLOOPS
1-17, 32-46, 62-74, 88-110, 146-162, 232-263
MGGTISMRRS RSTGDLRqrl lrargetyer lLGEVEDGSS QSLGELdkgl sslscegqky nQEQYMNTPW RNPAeerekl ayrkqnmDDI DEEDDDLVGD TVRPKVPLRT msyklaidms hfikekggle giyysarrhr ildiyLEKEE GIIPDWQDYT SGpgirypkt fgwlwklvpv nvsdeaqede ehylmhpaqt sqwddpwgev pawkfdptla ytyeayvryp eEFGSKSGLS EEEVRRRLTA RGLLNMADKK ETR
>P31818_REM465
1-13
MGGTISMRRS RSTgdlrqrl lrargetyer llgevedgss qslgeldkgl sslscegqky nqeqymntpw rnpaeerekl ayrkqnmddi deedddlvgd tvrpkvplrt msyklaidms hfikekggle giyysarrhr ildiylekee giipdwqdyt sgpgirypkt fgwlwklvpv nvsdeaqede ehylmhpaqt sqwddpwgev pawkfdptla ytyeayvryp eefgsksgls eeevrrrlta rgllnmadkk etr
JOB-ID | P31818_134710Zt78Xn8AAQEAABReA7EAAAAG |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | P31818 |
Description | sp|P31818|NEF_SIVMA Protein Nef OS=Simian immunodeficiency virus (isolate 1A11) OX=31682 GN=nef PE=1 SV=3 |
Title/ID | none |
Sequence length | 263 |
Download predictions | smoothed scores raw scores |