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>P35961_LOOPS
42-63, 69-84, 113-160, 175-188, 193-264, 269-276, 291-316, 347-404, 418-465, 474-488, 512-519, 578-603, 695-737
mrateirkny qhlwkggtll lgmlmicsaa eqlwvtvyyg vPVWKEATTT LFCASDAKAY DTEvhnvwAT HACVPTDPNP QEVKlenvte nfnmwknnmv eqmhediisl wdQSLKPCVK LTPLCVTLNC TDLRNATNTT SSSWETMEKG EIKNCSFNIT tsirdkvqke yalfYNLDVV PIDNASYRli scNTSVITQA CPKVSFEPIP IHYCAPAGFA ILKCNDKKFN GTGPCTNVST VQCTHGIRPV VSTQLLLNGS LAEEeiviRS ENFTNNakti ivqlnesvvi NCTRPNNNTR KSINIGPGRA LYTTGEiigd irqahcnlsk tqwentleqi aiklkeQFGN NKTIIFNPSS GGDPEIVTHS FNCGGEFFYC NSTQLFTWND TRKLNNTGRN ITLPcrikqi inmwqevGKA MYAPPIRGQI RCSSNITGLL LTRDGGKDTN GTEIFRPGGG DMRDNwrsel ykyKVVKIEP LGVAPTKAkr rvvqrekrav glgalflgfl gAAGSTMGAa sitltvqarq llsgivqqqn nllraieaqq hllqltvwgi kqlqarvlav erylrdqQLL GIWGCSGKLI CTTTVPWNTS WSNkslneiw dnmtwmkwer eidnythiiy slieqsqnqq ekneqellal dkwaslwnwf ditkwlwyik ifimivggli glrivfvvls ivnrVRQGYS PLSFQTHLPA QRGPDRPDGI EEEGGERDRD RSGPLVDgfl aiiwvdlrsl clfsyhrlrd lllivtrive llgrrgwgvl kywwnllqyw iqelknsavs llnataiava egtdrvieil qrafravlhi pvrirqgler all
>P35961_HOTLOOPS
1-13, 73-82, 128-158, 269-276, 294-308, 356-364, 440-465, 475-493, 593-604, 701-717, 723-735, 824-843
MRATEIRKNY QHLwkggtll lgmlmicsaa eqlwvtvyyg vpvwkeattt lfcasdakay dtevhnvwat haCVPTDPNP QEvklenvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtLNC TDLRNATNTT SSSWETMEKG EIKNCSFNit tsirdkvqke yalfynldvv pidnasyrli scntsvitqa cpkvsfepip ihycapagfa ilkcndkkfn gtgpctnvst vqcthgirpv vstqlllngs laeeeiviRS ENFTNNakti ivqlnesvvi nctRPNNNTR KSINIGPGra lyttgeiigd irqahcnlsk tqwentleqi aiklkeqfgn nktiiFNPSS GGDPeivths fncggeffyc nstqlftwnd trklnntgrn itlpcrikqi inmwqevgka myappirgqi rcssnitglL LTRDGGKDTN GTEIFRPGGG DMRDNwrsel ykykVVKIEP LGVAPTKAKR RVVqrekrav glgalflgfl gaagstmgaa sitltvqarq llsgivqqqn nllraieaqq hllqltvwgi kqlqarvlav erylrdqqll giwgcsgkli ctTTVPWNTS WSNKslneiw dnmtwmkwer eidnythiiy slieqsqnqq ekneqellal dkwaslwnwf ditkwlwyik ifimivggli glrivfvvls ivnrvrqgys PLSFQTHLPA QRGPDRPdgi eeEGGERDRD RSGPLvdgfl aiiwvdlrsl clfsyhrlrd lllivtrive llgrrgwgvl kywwnllqyw iqelknsavs llnataiava egtdrvieil qraFRAVLHI PVRIRQGLER ALL
>P35961_REM465
485-492, 636-644, 711-731
mrateirkny qhlwkggtll lgmlmicsaa eqlwvtvyyg vpvwkeattt lfcasdakay dtevhnvwat hacvptdpnp qevklenvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtlnc tdlrnatntt ssswetmekg eikncsfnit tsirdkvqke yalfynldvv pidnasyrli scntsvitqa cpkvsfepip ihycapagfa ilkcndkkfn gtgpctnvst vqcthgirpv vstqlllngs laeeeivirs enftnnakti ivqlnesvvi nctrpnnntr ksinigpgra lyttgeiigd irqahcnlsk tqwentleqi aiklkeqfgn nktiifnpss ggdpeivths fncggeffyc nstqlftwnd trklnntgrn itlpcrikqi inmwqevgka myappirgqi rcssnitgll ltrdggkdtn gteifrpggg dmrdnwrsel ykykvvkiep lgvaPTKAKR RVvqrekrav glgalflgfl gaagstmgaa sitltvqarq llsgivqqqn nllraieaqq hllqltvwgi kqlqarvlav erylrdqqll giwgcsgkli ctttvpwnts wsnkslneiw dnmtwmkwer eidnythiiy slieqSQNQQ EKNEqellal dkwaslwnwf ditkwlwyik ifimivggli glrivfvvls ivnrvrqgys plsfqthlpa QRGPDRPDGI EEEGGERDRD Rsgplvdgfl aiiwvdlrsl clfsyhrlrd lllivtrive llgrrgwgvl kywwnllqyw iqelknsavs llnataiava egtdrvieil qrafravlhi pvrirqgler all
| JOB-ID | P35961_105858Zt7U8n8AAQEAABReACIAAAAX |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P35961 |
| Description | sp|P35961|ENV_HV1Y2 Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) OX=362651 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 843 |
| Download predictions | smoothed scores raw scores |